| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yaeQ [H]
Identifier: 238028957
GI number: 238028957
Start: 3890399
End: 3890953
Strand: Reverse
Name: yaeQ [H]
Synonym: bglu_1g34220
Alternate gene names: 238028957
Gene position: 3890953-3890399 (Counterclockwise)
Preceding gene: 238028958
Following gene: 339905984
Centisome position: 99.6
GC content: 67.39
Gene sequence:
>555_bases ATGGCGCTCAAATCGACGATCTACAAGGCTGAACTGCAAATCGCAGACATGGACCGGCACTATTACGCCGACCACTCGCT CACCGTCGCACGTCACCCGTCCGAGACGGACGAGCGGATGATGGTGCGGATCGCCGCGTTTGCGCTGTTCGCGCACGAGC GACTCGAATTCTGCAAGGGGCTGTCGGATACCGACGAGCCCGATCTCTGGCTGAAGGACCTGACGGGCGCGATCGAAGCC TGGATCGACGTCGGCCAGCCCGAGGAGCGGCGCATCGCGAAGGCGAGCGGCCGCTCGGCCGAGGTGGATGTGATCGCCTA TGGCGGCCGGACCTCGGAAATCTGGTGGCAGGGCGTGCGCAGCAAGGTGGAGCGCCTGCGCAACGTGCGCGTGCTGTCGC TCGCGGAGGGCACCGCGGAGGCGCTCGGCGCGCTGGCCGAACGCACGATGCGGCTGCAATGCACGATTCAGGACGGCGCC GCGTGGCTGTCGAGCGCCGCGCACGATCCGGTCGCGATCGAATGGACGGTGCTGAAGCCGCGCGCGGAACGCTGA
Upstream 100 bases:
>100_bases CTGTCTGGCATGCGTGGCATGCCGGGCGCGGCGCGCGCCTCGCGCATTCGGTATCATCACGGCCCGACCGAACCCTTCGC CCGCAGCGGCACGATACCGG
Downstream 100 bases:
>100_bases TGCCCGCGCGCCGGCCCGGGGTGCCGGCGCGGCTCCTGTCCCCGGCCCTGGTTGTCACCGGCACTGCGGCCGCCGCTGCG GCGCCGAGCGCGCTTCAGCC
Product: YaeQ protein family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MALKSTIYKAELQIADMDRHYYADHSLTVARHPSETDERMMVRIAAFALFAHERLEFCKGLSDTDEPDLWLKDLTGAIEA WIDVGQPEERRIAKASGRSAEVDVIAYGGRTSEIWWQGVRSKVERLRNVRVLSLAEGTAEALGALAERTMRLQCTIQDGA AWLSSAAHDPVAIEWTVLKPRAER
Sequences:
>Translated_184_residues MALKSTIYKAELQIADMDRHYYADHSLTVARHPSETDERMMVRIAAFALFAHERLEFCKGLSDTDEPDLWLKDLTGAIEA WIDVGQPEERRIAKASGRSAEVDVIAYGGRTSEIWWQGVRSKVERLRNVRVLSLAEGTAEALGALAERTMRLQCTIQDGA AWLSSAAHDPVAIEWTVLKPRAER >Mature_183_residues ALKSTIYKAELQIADMDRHYYADHSLTVARHPSETDERMMVRIAAFALFAHERLEFCKGLSDTDEPDLWLKDLTGAIEAW IDVGQPEERRIAKASGRSAEVDVIAYGGRTSEIWWQGVRSKVERLRNVRVLSLAEGTAEALGALAERTMRLQCTIQDGAA WLSSAAHDPVAIEWTVLKPRAER
Specific function: Unknown
COG id: COG4681
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786388, Length=169, Percent_Identity=48.5207100591716, Blast_Score=171, Evalue=3e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009822 [H]
Pfam domain/function: PF07152 YaeQ [H]
EC number: NA
Molecular weight: Translated: 20680; Mature: 20548
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKSTIYKAELQIADMDRHYYADHSLTVARHPSETDERMMVRIAAFALFAHERLEFCKG CCCHHHHEEEEEEEEECCCEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC LSDTDEPDLWLKDLTGAIEAWIDVGQPEERRIAKASGRSAEVDVIAYGGRTSEIWWQGVR CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHH SKVERLRNVRVLSLAEGTAEALGALAERTMRLQCTIQDGAAWLSSAAHDPVAIEWTVLKP HHHHHHHCCEEEEECCCHHHHHHHHHHCEEEEEEEECCHHHHHHHCCCCCEEEEEEEECC RAER CCCC >Mature Secondary Structure ALKSTIYKAELQIADMDRHYYADHSLTVARHPSETDERMMVRIAAFALFAHERLEFCKG CCHHHHEEEEEEEEECCCEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC LSDTDEPDLWLKDLTGAIEAWIDVGQPEERRIAKASGRSAEVDVIAYGGRTSEIWWQGVR CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHH SKVERLRNVRVLSLAEGTAEALGALAERTMRLQCTIQDGAAWLSSAAHDPVAIEWTVLKP HHHHHHHCCEEEEECCCHHHHHHHHHHCEEEEEEEECCHHHHHHHCCCCCEEEEEEEECC RAER CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]