| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 339905969
Identifier: 339905969
GI number: 339905969
Start: 2259322
End: 2260956
Strand: Direct
Name: 339905969
Synonym: NA
Alternate gene names: NA
Gene position: 2259322-2260956 (Clockwise)
Preceding gene: 238027648
Following gene: 238027650
Centisome position: 57.83
GC content: 65.87
Gene sequence:
>1635_bases ATGACTGAACGCATCATCCACGACCTCATCCAAGGTACTCCCGAATGGGAGGCTTTCCGCCTCGAACACTTCGGCGCCAG CGAGGCGGCCGCCATGCTCGGCATCTCGCCGAAGGTCAAGCGCAACGAGCTGCTGCACATGAAGCACACAGGCACGCCGA AGGAATTCAGCGACTGGGTGCAGGAGCACATCCTCGATCGCGGCCACGAAGTCGAAGCGCTCGCGCGCCCATTCGCCGAG GAAGTAATCGGCGAAGACCTGTATCCCGTGACCTGCTCGTTCGGCGTGCCGTCGGCATCCTGCGACGGCCTGACGATGGA CCACAGCACCGCGTGGGAACACAAGCAATGGAATGAGGATCTGGCGAAATCGCTGCGCGCCGGCGTGCTTCCCGACGAGC ACCAGCCGCAGGTGCAGCAGAACATGCACGTCACCGGTGCGTCCCGCCTGCTGTTCACCTGCTCCAATGGCACCGAAGAG AAGATGGTCCACCTGTGGGTGGCACCCGATCCGGAATGGGTCGCGCGCATCAACGCCGGCTGGGAACAGTTCGCGAAGGA TCTCGCCACGTACCAACCGCGCGATATCCGCGAAGCCCCGAAGGGCGAAGCGATTCTCAGCCTGCCGACGCTGGCCGTGC AGATTCGCGGCGAAGTGGTGTCGAGCAACCTGCCCCGCTTCAAGGCGGCGGCCGAATCGTTCATCGCCAACATCAAGACC GACCTCAAGACCGACGAGGACTTTGCCAACGCCGCGTCGACGGTTTCGTTCTGCGAGAAAGCCGAGAAGGAACTGGAGAT GGCGAAGAACGCGGCCATCGGCCAGACGGCGAGTATCGACGAGCTGATGCGCACGCTCGACCACATCAGCGCGCAGCTGC GCGAAAAGCGCTTGGCGCTCGACAAGCTCGTGACGAAGCGCAAGGGCGAGATCAAGGACGAGATCATCCTCGGTGGCAAA AGCGCCTACGCCGCCCACATCAAGTCGCTGAACGACGAGCTGGCCGACGTGACGCTCGTCGTCGCCGTACCGGATTTCGT CACCGCCGCGAAGAACAAGCGCACGCTGGCCAGCCTGCACGAAGCGATCGACACCGCCGTGGCCAACGGCAAGATCGCCG CCGACGCGGCCGCGCGCGACCTGCGCGCCAAGCTCGACTGGTACCGCAAGCAGGCCGCCGAGCACACCTTCCTGTTCCGC GACCTGCAGCAGCTCATCCAGAAGCCGGCTGAGGACTTCCACCTCGCCGTCGACGCCCGCATCGAGCAGCACAAGAAGCA GCAGGCCGAGGAAGCCGAACGCAAGCGCGCCGCTGAGCGGGCAGCAGCCGATGAGGCAGCGGCGGCCGCAGCAGCGAAGG CGAACGCCGCCCCCGCGGTTGACGAGCCGGCTCCCGCAGCCGCCCAGGCGACCCGGCAACCGGCACCGCAGACCACGTCG GTTCCTGCAGCAGCGTCTGCCGGCCCTCGGCGCGGCACCGGCGGCTCCATGCGTACCCAGCCGTCGCGCCCGAGCGACGA CGAGATTGTCGGCGTGCTCGCCCTGCACTACCGCCAGCACGAATCGAAGATCGTCGAATGGCTCCTCGCCATGGACCTGA AAGCGGCGAGCGAGCGGCTTGCCGCTGCGTTCTAA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: phage-type endonuclease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 544; Mature: 543
Protein sequence:
NA
Sequences:
>Translated_544_residues MTERIIHDLIQGTPEWEAFRLEHFGASEAAAMLGISPKVKRNELLHMKHTGTPKEFSDWVQEHILDRGHEVEALARPFAE EVIGEDLYPVTCSFGVPSASCDGLTMDHSTAWEHKQWNEDLAKSLRAGVLPDEHQPQVQQNMHVTGASRLLFTCSNGTEE KMVHLWVAPDPEWVARINAGWEQFAKDLATYQPRDIREAPKGEAILSLPTLAVQIRGEVVSSNLPRFKAAAESFIANIKT DLKTDEDFANAASTVSFCEKAEKELEMAKNAAIGQTASIDELMRTLDHISAQLREKRLALDKLVTKRKGEIKDEIILGGK SAYAAHIKSLNDELADVTLVVAVPDFVTAAKNKRTLASLHEAIDTAVANGKIAADAAARDLRAKLDWYRKQAAEHTFLFR DLQQLIQKPAEDFHLAVDARIEQHKKQQAEEAERKRAAERAAADEAAAAAAAKANAAPAVDEPAPAAAQATRQPAPQTTS VPAAASAGPRRGTGGSMRTQPSRPSDDEIVGVLALHYRQHESKIVEWLLAMDLKAASERLAAAF >Mature_543_residues TERIIHDLIQGTPEWEAFRLEHFGASEAAAMLGISPKVKRNELLHMKHTGTPKEFSDWVQEHILDRGHEVEALARPFAEE VIGEDLYPVTCSFGVPSASCDGLTMDHSTAWEHKQWNEDLAKSLRAGVLPDEHQPQVQQNMHVTGASRLLFTCSNGTEEK MVHLWVAPDPEWVARINAGWEQFAKDLATYQPRDIREAPKGEAILSLPTLAVQIRGEVVSSNLPRFKAAAESFIANIKTD LKTDEDFANAASTVSFCEKAEKELEMAKNAAIGQTASIDELMRTLDHISAQLREKRLALDKLVTKRKGEIKDEIILGGKS AYAAHIKSLNDELADVTLVVAVPDFVTAAKNKRTLASLHEAIDTAVANGKIAADAAARDLRAKLDWYRKQAAEHTFLFRD LQQLIQKPAEDFHLAVDARIEQHKKQQAEEAERKRAAERAAADEAAAAAAAKANAAPAVDEPAPAAAQATRQPAPQTTSV PAAASAGPRRGTGGSMRTQPSRPSDDEIVGVLALHYRQHESKIVEWLLAMDLKAASERLAAAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59620; Mature: 59489
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERIIHDLIQGTPEWEAFRLEHFGASEAAAMLGISPKVKRNELLHMKHTGTPKEFSDWV CCHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHH QEHILDRGHEVEALARPFAEEVIGEDLYPVTCSFGVPSASCDGLTMDHSTAWEHKQWNED HHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH LAKSLRAGVLPDEHQPQVQQNMHVTGASRLLFTCSNGTEEKMVHLWVAPDPEWVARINAG HHHHHHHCCCCCCCCCHHHHCCCEECCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHCC WEQFAKDLATYQPRDIREAPKGEAILSLPTLAVQIRGEVVSSNLPRFKAAAESFIANIKT HHHHHHHHHHCCCCHHHCCCCCCEEEECCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHH DLKTDEDFANAASTVSFCEKAEKELEMAKNAAIGQTASIDELMRTLDHISAQLREKRLAL HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DKLVTKRKGEIKDEIILGGKSAYAAHIKSLNDELADVTLVVAVPDFVTAAKNKRTLASLH HHHHHHHCCCCCHHEEECCCHHHHHHHHHHHHHHHCEEEEEECCHHHHHHCCHHHHHHHH EAIDTAVANGKIAADAAARDLRAKLDWYRKQAAEHTFLFRDLQQLIQKPAEDFHLAVDAR HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEHHHHH IEQHKKQQAEEAERKRAAERAAADEAAAAAAAKANAAPAVDEPAPAAAQATRQPAPQTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCC VPAAASAGPRRGTGGSMRTQPSRPSDDEIVGVLALHYRQHESKIVEWLLAMDLKAASERL CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAF HHCC >Mature Secondary Structure TERIIHDLIQGTPEWEAFRLEHFGASEAAAMLGISPKVKRNELLHMKHTGTPKEFSDWV CHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHH QEHILDRGHEVEALARPFAEEVIGEDLYPVTCSFGVPSASCDGLTMDHSTAWEHKQWNED HHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH LAKSLRAGVLPDEHQPQVQQNMHVTGASRLLFTCSNGTEEKMVHLWVAPDPEWVARINAG HHHHHHHCCCCCCCCCHHHHCCCEECCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHCC WEQFAKDLATYQPRDIREAPKGEAILSLPTLAVQIRGEVVSSNLPRFKAAAESFIANIKT HHHHHHHHHHCCCCHHHCCCCCCEEEECCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHH DLKTDEDFANAASTVSFCEKAEKELEMAKNAAIGQTASIDELMRTLDHISAQLREKRLAL HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DKLVTKRKGEIKDEIILGGKSAYAAHIKSLNDELADVTLVVAVPDFVTAAKNKRTLASLH HHHHHHHCCCCCHHEEECCCHHHHHHHHHHHHHHHCEEEEEECCHHHHHHCCHHHHHHHH EAIDTAVANGKIAADAAARDLRAKLDWYRKQAAEHTFLFRDLQQLIQKPAEDFHLAVDAR HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEHHHHH IEQHKKQQAEEAERKRAAERAAADEAAAAAAAKANAAPAVDEPAPAAAQATRQPAPQTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCC VPAAASAGPRRGTGGSMRTQPSRPSDDEIVGVLALHYRQHESKIVEWLLAMDLKAASERL CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAF HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA