| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027648
Identifier: 238027648
GI number: 238027648
Start: 2258427
End: 2259329
Strand: Direct
Name: 238027648
Synonym: bglu_1g20690
Alternate gene names: NA
Gene position: 2258427-2259329 (Clockwise)
Preceding gene: 238027647
Following gene: 339905969
Centisome position: 57.81
GC content: 65.01
Gene sequence:
>903_bases ATGCAGACCGCCACCATGGCCGACGTCATCGACGCCGACATCACCGCCCCACGCCCCGAGCAGCCCCTGGCCAACGTCCA GTCGTCGCCGCCCGCGCCAGTTCGCGCCGCTTCGACCATCACGGCGCGGGATCTCCTCCGCCTGTCGGTCGAACGCGGGG CGAGCCTCGAGCAGATCGAGAAGCTGATGGATCTGCTGGATCGAAACGAAGCGCGCGACGCACGGCTCGCGTTCGTTGAG GCGATGGCCGCCTTCAAGAAGGAACCGCTCGATATCTTCAAGCGCAAGCAGGTCGAGTTCCAGACTCGGGACGGCGAATG GACGCGCTACAAGCACGCCGAGCTGTCGGACATCACCGACGTCGTCGGGCCGGCCATGGCGAAGTATGGCCTGTCGTTCG ACTGGGACATCCACCAGAGTAACGGCCTCATTACCGTCGACTGCGTCGTGACGCACGTTCAGGGACATTTCAAGAAGGTC ACGATGTCCGGCGCACCAGACGCGAGCGGCAAGAAGAACGCCATCCAGCAGGCGGCCAGCACGATCACTTATCTGCAGCG CTACACGCTGCTCGCCGCGACTGGCATGTCCACGAAGGGCGAGGACGACGACGGCGCAGGCGGCGCAGATCCCGACGGCG ATCCTGGCGCCGGCCAGCAGCCGGCCGGCGAGGCCCAGCAAAACGGCGCCCGGAGCGCGCGCGCCGCAGGCCAGAACCAG CCCGCTCGCCCTGCCTTCTACGACCAGGCGAAGTTCGACGCCAACAAAGCCGAATGGAGAAAGGTCGTCACGTCGAAGCG TAAGACCCCGGCCAAGATGATCGCCTTCATCGAATCCCGTGGCGCCCCGCTCACTGAAGCCCAGAAGAACACCATCGACT CTTGGAGCCATGAAAATGACTGA
Upstream 100 bases:
>100_bases CCGTCCTCTACGTCGCACGCGAGATCGACCACACCAACTCCGACCTGCTGCGCTGGCAACTGGCCAGCGTGCGCCAGGTG TAACCGCCCCGGAGCATTTC
Downstream 100 bases:
>100_bases ACGCATCATCCACGACCTCATCCAAGGTACTCCCGAATGGGAGGCTTTCCGCCTCGAACACTTCGGCGCCAGCGAGGCGG CCGCCATGCTCGGCATCTCG
Product: ERF family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MQTATMADVIDADITAPRPEQPLANVQSSPPAPVRAASTITARDLLRLSVERGASLEQIEKLMDLLDRNEARDARLAFVE AMAAFKKEPLDIFKRKQVEFQTRDGEWTRYKHAELSDITDVVGPAMAKYGLSFDWDIHQSNGLITVDCVVTHVQGHFKKV TMSGAPDASGKKNAIQQAASTITYLQRYTLLAATGMSTKGEDDDGAGGADPDGDPGAGQQPAGEAQQNGARSARAAGQNQ PARPAFYDQAKFDANKAEWRKVVTSKRKTPAKMIAFIESRGAPLTEAQKNTIDSWSHEND
Sequences:
>Translated_300_residues MQTATMADVIDADITAPRPEQPLANVQSSPPAPVRAASTITARDLLRLSVERGASLEQIEKLMDLLDRNEARDARLAFVE AMAAFKKEPLDIFKRKQVEFQTRDGEWTRYKHAELSDITDVVGPAMAKYGLSFDWDIHQSNGLITVDCVVTHVQGHFKKV TMSGAPDASGKKNAIQQAASTITYLQRYTLLAATGMSTKGEDDDGAGGADPDGDPGAGQQPAGEAQQNGARSARAAGQNQ PARPAFYDQAKFDANKAEWRKVVTSKRKTPAKMIAFIESRGAPLTEAQKNTIDSWSHEND >Mature_300_residues MQTATMADVIDADITAPRPEQPLANVQSSPPAPVRAASTITARDLLRLSVERGASLEQIEKLMDLLDRNEARDARLAFVE AMAAFKKEPLDIFKRKQVEFQTRDGEWTRYKHAELSDITDVVGPAMAKYGLSFDWDIHQSNGLITVDCVVTHVQGHFKKV TMSGAPDASGKKNAIQQAASTITYLQRYTLLAATGMSTKGEDDDGAGGADPDGDPGAGQQPAGEAQQNGARSARAAGQNQ PARPAFYDQAKFDANKAEWRKVVTSKRKTPAKMIAFIESRGAPLTEAQKNTIDSWSHEND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32600; Mature: 32600
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTATMADVIDADITAPRPEQPLANVQSSPPAPVRAASTITARDLLRLSVERGASLEQIE CCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH KLMDLLDRNEARDARLAFVEAMAAFKKEPLDIFKRKQVEFQTRDGEWTRYKHAELSDITD HHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCEEECCCCCCEEECCCHHHHHHH VVGPAMAKYGLSFDWDIHQSNGLITVDCVVTHVQGHFKKVTMSGAPDASGKKNAIQQAAS HHHHHHHHHCCCCCEEEECCCCEEEHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHH TITYLQRYTLLAATGMSTKGEDDDGAGGADPDGDPGAGQQPAGEAQQNGARSARAAGQNQ HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHCCCCC PARPAFYDQAKFDANKAEWRKVVTSKRKTPAKMIAFIESRGAPLTEAQKNTIDSWSHEND CCCCCHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MQTATMADVIDADITAPRPEQPLANVQSSPPAPVRAASTITARDLLRLSVERGASLEQIE CCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH KLMDLLDRNEARDARLAFVEAMAAFKKEPLDIFKRKQVEFQTRDGEWTRYKHAELSDITD HHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCEEECCCCCCEEECCCHHHHHHH VVGPAMAKYGLSFDWDIHQSNGLITVDCVVTHVQGHFKKVTMSGAPDASGKKNAIQQAAS HHHHHHHHHCCCCCEEEECCCCEEEHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHH TITYLQRYTLLAATGMSTKGEDDDGAGGADPDGDPGAGQQPAGEAQQNGARSARAAGQNQ HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHCCCCC PARPAFYDQAKFDANKAEWRKVVTSKRKTPAKMIAFIESRGAPLTEAQKNTIDSWSHEND CCCCCHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA