Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028952

Identifier: 238028952

GI number: 238028952

Start: 3884437

End: 3884841

Strand: Reverse

Name: 238028952

Synonym: bglu_1g34170

Alternate gene names: NA

Gene position: 3884841-3884437 (Counterclockwise)

Preceding gene: 238028953

Following gene: 238028951

Centisome position: 99.45

GC content: 66.67

Gene sequence:

>405_bases
ATGGACGAAGACGCAATCCGGGCACTGCTCGACCGGCTGCTCGCGCCGTGGGTGAAATCGCTCGGGCTCGCGCCCGTCGC
CGTATCGGACGAAGGCGTGACGCTGCGCCTGCCGTTTTCCGGCGAACTACGGCACTCGGGCGGCGTGATCTGCGGCCAGG
CATTCATGGCTGCGGCCGATACGGCCATGCTGGCCGCCGTCGCGGCGAAACTCGGCGAATTTCGGCCAATGACGACGGTG
TCGCTGAACACGAGCTTCATGCGCGCGGTGCGGTGCGGCGACCTGCTCGTCACGGCGCGCGTGCTGCGCACGGGCCGCAA
CCTCGTGTTCGGGGAAATCGAGGTGATGGACGAAGACGGCAAGATGGCCGTCCACGCCACCTCCACCTATGCATTGGTCA
ACTAG

Upstream 100 bases:

>100_bases
CCCGGCGCGGGTCATGAACTGACGGCCGAGCCGGGCTCCCGGTATCATGTCGCCCACATTCATCGCGCGACGGTCGTGCG
ATGCCGCCGAGGTGGTCACG

Downstream 100 bases:

>100_bases
GGAGCGCGGGATGTTCGATCAGGTCGTATTCGCCGGCGGTGGCAACCGCTGCTGGTGGCAGGCAGGTTTCTGGGATGTCG
CGCAGCCGGCGCTCGGCATC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Phenylacetic Acid Degradation-Like Protein

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MDEDAIRALLDRLLAPWVKSLGLAPVAVSDEGVTLRLPFSGELRHSGGVICGQAFMAAADTAMLAAVAAKLGEFRPMTTV
SLNTSFMRAVRCGDLLVTARVLRTGRNLVFGEIEVMDEDGKMAVHATSTYALVN

Sequences:

>Translated_134_residues
MDEDAIRALLDRLLAPWVKSLGLAPVAVSDEGVTLRLPFSGELRHSGGVICGQAFMAAADTAMLAAVAAKLGEFRPMTTV
SLNTSFMRAVRCGDLLVTARVLRTGRNLVFGEIEVMDEDGKMAVHATSTYALVN
>Mature_134_residues
MDEDAIRALLDRLLAPWVKSLGLAPVAVSDEGVTLRLPFSGELRHSGGVICGQAFMAAADTAMLAAVAAKLGEFRPMTTV
SLNTSFMRAVRCGDLLVTARVLRTGRNLVFGEIEVMDEDGKMAVHATSTYALVN

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14281; Mature: 14281

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEDAIRALLDRLLAPWVKSLGLAPVAVSDEGVTLRLPFSGELRHSGGVICGQAFMAAAD
CCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCCCCCCEEEHHHHHHHHH
TAMLAAVAAKLGEFRPMTTVSLNTSFMRAVRCGDLLVTARVLRTGRNLVFGEIEVMDEDG
HHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCC
KMAVHATSTYALVN
CEEEEECCEEEEEC
>Mature Secondary Structure
MDEDAIRALLDRLLAPWVKSLGLAPVAVSDEGVTLRLPFSGELRHSGGVICGQAFMAAAD
CCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCCCCCCEEEHHHHHHHHH
TAMLAAVAAKLGEFRPMTTVSLNTSFMRAVRCGDLLVTARVLRTGRNLVFGEIEVMDEDG
HHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCC
KMAVHATSTYALVN
CEEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA