| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028947
Identifier: 238028947
GI number: 238028947
Start: 3877649
End: 3878029
Strand: Direct
Name: 238028947
Synonym: bglu_1g34120
Alternate gene names: NA
Gene position: 3877649-3878029 (Clockwise)
Preceding gene: 238028946
Following gene: 238028948
Centisome position: 99.26
GC content: 66.67
Gene sequence:
>381_bases ATGCCCGCGCTGAATCTCGATACCGATGCAGATCGGATCGCCGAGCGCCTTCGAGACCCGGACGCGCTGCTCGTCGCCTG CCTGTGCGCCGAGTGGTGCGGCACTTGCCGCGACTACGCCGGGGTCTTCGAACGGCTCGCGGCCGCGCATCCGCAGGCTT GCTTCGTCTGGATCGATATCGAAACCCATGCCGACCGGCTCGACGAATTCGACGTCGAGAATTTCCCGACGCTCCTGATC GAGGACGCCAGGGCCGTGCGTTTCTTCGGCACGGTGCTGCCGCACGGCGCAATCGTCGAGCGGATGCTCGCCGATCTCAC GGCGATCCCGGGCGTCGCCCACGCGCCGAAGCTGCGCAATCTGCTCGACGTCGCCGTTTGA
Upstream 100 bases:
>100_bases ACCAGCGGCTTGATCCGCCCCCGTCCGGCGTTTCGGCCACCGTGCTACATTCCGGCGACAAGGCGCAGCCCGCGCCGCCG CCCTCACGCAAGGAATCGTC
Downstream 100 bases:
>100_bases GCCGCCGCCGGGCCGTGGCCCTAGGCCGCGCAAACCGCCCCGCCGAGGCCGCCGGCCGGATCGACAGGCCCGCGCCGCCG GGCAATCCGGCGGGCTTGCC
Product: putative thioredoxin
Products: NA
Alternate protein names: Thioredoxin-Like Protein; Thioredoxin Domain-Containing Protein; Thioredoxin; Thioredoxin Protein; Thiol-Disulfide Isomerase And Thioredoxins; Thioredoxin Domain; Thiol-Disulfide Isomerase And Thioredoxins Family Protein; Thioredoxin-Disulfide Reductase
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MPALNLDTDADRIAERLRDPDALLVACLCAEWCGTCRDYAGVFERLAAAHPQACFVWIDIETHADRLDEFDVENFPTLLI EDARAVRFFGTVLPHGAIVERMLADLTAIPGVAHAPKLRNLLDVAV
Sequences:
>Translated_126_residues MPALNLDTDADRIAERLRDPDALLVACLCAEWCGTCRDYAGVFERLAAAHPQACFVWIDIETHADRLDEFDVENFPTLLI EDARAVRFFGTVLPHGAIVERMLADLTAIPGVAHAPKLRNLLDVAV >Mature_125_residues PALNLDTDADRIAERLRDPDALLVACLCAEWCGTCRDYAGVFERLAAAHPQACFVWIDIETHADRLDEFDVENFPTLLIE DARAVRFFGTVLPHGAIVERMLADLTAIPGVAHAPKLRNLLDVAV
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13927; Mature: 13796
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALNLDTDADRIAERLRDPDALLVACLCAEWCGTCRDYAGVFERLAAAHPQACFVWIDI CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC ETHADRLDEFDVENFPTLLIEDARAVRFFGTVLPHGAIVERMLADLTAIPGVAHAPKLRN CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHH LLDVAV HHHHCC >Mature Secondary Structure PALNLDTDADRIAERLRDPDALLVACLCAEWCGTCRDYAGVFERLAAAHPQACFVWIDI CCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC ETHADRLDEFDVENFPTLLIEDARAVRFFGTVLPHGAIVERMLADLTAIPGVAHAPKLRN CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHH LLDVAV HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA