Click here to switch to the map view.

The map label for this gene is slmA [H]

Identifier: 238028917

GI number: 238028917

Start: 3844296

End: 3845006

Strand: Direct

Name: slmA [H]

Synonym: bglu_1g33820

Alternate gene names: 238028917

Gene position: 3844296-3845006 (Clockwise)

Preceding gene: 238028916

Following gene: 238028918

Centisome position: 98.41

GC content: 72.15

Gene sequence:

>711_bases
ATGCAGCCGACTGAACCGCGGGACCCGGCCGTAGCCACGGCCGACACGGCCGACACCCGACCTCCGGCGGCCGGCACCGC
GCCGCGCCCGCGCGCGCGGCCGAAGCCCGGCGAGCGGCGGGTGCTGATCCTGCAGACGCTGGCCAGCATGCTCGAGGCGC
CCAAGCGCGAGAAAATCACCACCGCCGCGCTCGCGGCCCGGCTCGAGATCTCGGAGGCGGCGCTCTACCGCCACTTCGCG
AGCAAGGCGCAGATGTTCGAAGGCCTGATCGAGTTCATCGAGACCACCATCTTCGGGCTCGTCAACCAGATCGTCGACAA
GGAGCCGGACGGCTTGCTGCAGGCGCGCGCGATCGGCCTGATGCTGCTCAACTTCGCGGCCCGCAACCCGGGCATGACCC
GCGTGCTGACGGGCGAGGCGCTGGTGGGCGAGCACGAGCGGCTGATCGAGCGGATCGACCGCATGCTCGAACGCGTCGAG
GCCTCGGTGCGGCAGTGCCTGCGCACGGCGCTCGCGCAGTCCGCGCAGTCCGCGCAGTCCGCGCAGTCTCCCGCCGGCGC
GACGGCGCTGCCGCCCGGCTACGATCCCGCGATGCGCGCCAACCTGCTCGTCACGCACGTGCTCGGCCGCTGGCATCGCT
ACGCGCGCAGCGGCTTCGGCAAATCGCCGGTCGAGCACGCCGACGTCCAGCTGCAGCTGATCCTCTGCTGA

Upstream 100 bases:

>100_bases
TGCCCGGCCATCTGCCGCGAATCGGCCGCCCGCACTATGTCGATCGTCGCATTGCTTCGCTACAATCGCTGCGACTGAGC
ACACGAGCGGGGCGACGCAA

Downstream 100 bases:

>100_bases
GCGTGCGGGCCGGCGGCGCGCGCCGCGGCTCTTCCGCGCCCGGCGATTTCCGCTATACTTTGCCGGCTCGCTGCCGCCTG
AACGCGGCGGCGGCCAAGGA

Product: division inhibitor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MQPTEPRDPAVATADTADTRPPAAGTAPRPRARPKPGERRVLILQTLASMLEAPKREKITTAALAARLEISEAALYRHFA
SKAQMFEGLIEFIETTIFGLVNQIVDKEPDGLLQARAIGLMLLNFAARNPGMTRVLTGEALVGEHERLIERIDRMLERVE
ASVRQCLRTALAQSAQSAQSAQSPAGATALPPGYDPAMRANLLVTHVLGRWHRYARSGFGKSPVEHADVQLQLILC

Sequences:

>Translated_236_residues
MQPTEPRDPAVATADTADTRPPAAGTAPRPRARPKPGERRVLILQTLASMLEAPKREKITTAALAARLEISEAALYRHFA
SKAQMFEGLIEFIETTIFGLVNQIVDKEPDGLLQARAIGLMLLNFAARNPGMTRVLTGEALVGEHERLIERIDRMLERVE
ASVRQCLRTALAQSAQSAQSAQSPAGATALPPGYDPAMRANLLVTHVLGRWHRYARSGFGKSPVEHADVQLQLILC
>Mature_236_residues
MQPTEPRDPAVATADTADTRPPAAGTAPRPRARPKPGERRVLILQTLASMLEAPKREKITTAALAARLEISEAALYRHFA
SKAQMFEGLIEFIETTIFGLVNQIVDKEPDGLLQARAIGLMLLNFAARNPGMTRVLTGEALVGEHERLIERIDRMLERVE
ASVRQCLRTALAQSAQSAQSAQSPAGATALPPGYDPAMRANLLVTHVLGRWHRYARSGFGKSPVEHADVQLQLILC

Specific function: Required for nucleoid occlusion (NO) phenomenon, which cooperates in the proper positioning of the ftsZ/septal ring at midcell during cell division [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082302, Length=199, Percent_Identity=41.7085427135678, Blast_Score=127, Evalue=9e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 25744; Mature: 25744

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPTEPRDPAVATADTADTRPPAAGTAPRPRARPKPGERRVLILQTLASMLEAPKREKIT
CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH
TAALAARLEISEAALYRHFASKAQMFEGLIEFIETTIFGLVNQIVDKEPDGLLQARAIGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
MLLNFAARNPGMTRVLTGEALVGEHERLIERIDRMLERVEASVRQCLRTALAQSAQSAQS
HHHHHHHCCCCCEEEEECCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQSPAGATALPPGYDPAMRANLLVTHVLGRWHRYARSGFGKSPVEHADVQLQLILC
HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MQPTEPRDPAVATADTADTRPPAAGTAPRPRARPKPGERRVLILQTLASMLEAPKREKIT
CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH
TAALAARLEISEAALYRHFASKAQMFEGLIEFIETTIFGLVNQIVDKEPDGLLQARAIGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
MLLNFAARNPGMTRVLTGEALVGEHERLIERIDRMLERVEASVRQCLRTALAQSAQSAQS
HHHHHHHCCCCCEEEEECCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQSPAGATALPPGYDPAMRANLLVTHVLGRWHRYARSGFGKSPVEHADVQLQLILC
HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA