Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238028916

Identifier: 238028916

GI number: 238028916

Start: 3843535

End: 3844329

Strand: Direct

Name: 238028916

Synonym: bglu_1g33810

Alternate gene names: NA

Gene position: 3843535-3844329 (Clockwise)

Preceding gene: 238028915

Following gene: 238028917

Centisome position: 98.39

GC content: 71.32

Gene sequence:

>795_bases
TTGAGCGGCCCGCGCACGCCTGTCCGGCCCGCGGCCCAACCGGCGCGGCGGCCGGCGCGCCGTGCGCGCCGGGTCCGGCC
GCAGGCCGGCCGGCCGGTCTGGCTGTTCGACCTCGACAACACGCTGCATCACGCCTCGCACGCGATCTTCCCGGCCATCA
ACGCCGCGATGACGCAGTACATCATCGACACGCTGCAGGTCGATCGCGCCCGCGCCGACCATCTGCGCACGTTCTACACG
CGCCGCTACGGCGCCGCCCTGCTCGGGCTCGCACGCCACCATCCGATCGATCCGCACGATTTCCTGAAAGTCGTGCATAC
CTTCACGGACCTGCCCTCGATGGTGCGCGGCGAACGCGGGCTCGCGCGCCGCTTGGCGGCGCTGCCGGGCCGCAAGCTGA
TCCTGACCAATGCGCCGGAGTCTTACGCGCGCGCGGTGCTCGCCGAACTCGGCATCGAGCGGCTGTTCGAGCGCGTGATC
GCGATCGAGCAGATGCGCGACCGCCGCGCCTGGCGCGCCAAGCCCGACGCCGCGATGCTGCGCCGGGCGATCCGCGATGC
GCGCGCGCGGCTCGCCGACGCGATCCTCGTCGAGGACACCCGCAGCCATCTGAAGCGCTACAAGGGGCTCGGCATCCGCA
CCATCTGGATCACCGGGCACCTGCCCGGCCATCTGCCGCGAATCGGCCGCCCGCACTATGTCGATCGTCGCATTGCTTCG
CTACAATCGCTGCGACTGAGCACACGAGCGGGGCGACGCAAATGCAGCCGACTGAACCGCGGGACCCGGCCGTAG

Upstream 100 bases:

>100_bases
GCGGCGTCAAGTCGGTCCATATCGTCGACGGCCGCATCGAACACTCGGTGCTGCTCGAGATCCTGACCGAACAGCCGTTC
GGCACGATGATCCGCTCGCA

Downstream 100 bases:

>100_bases
CCACGGCCGACACGGCCGACACCCGACCTCCGGCGGCCGGCACCGCGCCGCGCCCGCGCGCGCGGCCGAAGCCCGGCGAG
CGGCGGGTGCTGATCCTGCA

Product: HAD-superfamily hydrolase

Products: NA

Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; HAD Family Pyrimidine 5-Nucleotidase; HAD Family Hydrolase; Phosphatase; Hydrolase Protein; HAD Superfamily Hydrolase; Haloacid Dehalogenase Superfamily Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Phosphoglycolate Phosphatase

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MSGPRTPVRPAAQPARRPARRARRVRPQAGRPVWLFDLDNTLHHASHAIFPAINAAMTQYIIDTLQVDRARADHLRTFYT
RRYGAALLGLARHHPIDPHDFLKVVHTFTDLPSMVRGERGLARRLAALPGRKLILTNAPESYARAVLAELGIERLFERVI
AIEQMRDRRAWRAKPDAAMLRRAIRDARARLADAILVEDTRSHLKRYKGLGIRTIWITGHLPGHLPRIGRPHYVDRRIAS
LQSLRLSTRAGRRKCSRLNRGTRP

Sequences:

>Translated_264_residues
MSGPRTPVRPAAQPARRPARRARRVRPQAGRPVWLFDLDNTLHHASHAIFPAINAAMTQYIIDTLQVDRARADHLRTFYT
RRYGAALLGLARHHPIDPHDFLKVVHTFTDLPSMVRGERGLARRLAALPGRKLILTNAPESYARAVLAELGIERLFERVI
AIEQMRDRRAWRAKPDAAMLRRAIRDARARLADAILVEDTRSHLKRYKGLGIRTIWITGHLPGHLPRIGRPHYVDRRIAS
LQSLRLSTRAGRRKCSRLNRGTRP
>Mature_263_residues
SGPRTPVRPAAQPARRPARRARRVRPQAGRPVWLFDLDNTLHHASHAIFPAINAAMTQYIIDTLQVDRARADHLRTFYTR
RYGAALLGLARHHPIDPHDFLKVVHTFTDLPSMVRGERGLARRLAALPGRKLILTNAPESYARAVLAELGIERLFERVIA
IEQMRDRRAWRAKPDAAMLRRAIRDARARLADAILVEDTRSHLKRYKGLGIRTIWITGHLPGHLPRIGRPHYVDRRIASL
QSLRLSTRAGRRKCSRLNRGTRP

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30168; Mature: 30036

Theoretical pI: Translated: 12.30; Mature: 12.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPRTPVRPAAQPARRPARRARRVRPQAGRPVWLFDLDNTLHHASHAIFPAINAAMTQY
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
IIDTLQVDRARADHLRTFYTRRYGAALLGLARHHPIDPHDFLKVVHTFTDLPSMVRGERG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHH
LARRLAALPGRKLILTNAPESYARAVLAELGIERLFERVIAIEQMRDRRAWRAKPDAAML
HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RRAIRDARARLADAILVEDTRSHLKRYKGLGIRTIWITGHLPGHLPRIGRPHYVDRRIAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHH
LQSLRLSTRAGRRKCSRLNRGTRP
HHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SGPRTPVRPAAQPARRPARRARRVRPQAGRPVWLFDLDNTLHHASHAIFPAINAAMTQY
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
IIDTLQVDRARADHLRTFYTRRYGAALLGLARHHPIDPHDFLKVVHTFTDLPSMVRGERG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHH
LARRLAALPGRKLILTNAPESYARAVLAELGIERLFERVIAIEQMRDRRAWRAKPDAAML
HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RRAIRDARARLADAILVEDTRSHLKRYKGLGIRTIWITGHLPGHLPRIGRPHYVDRRIAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHH
LQSLRLSTRAGRRKCSRLNRGTRP
HHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA