| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028916
Identifier: 238028916
GI number: 238028916
Start: 3843535
End: 3844329
Strand: Direct
Name: 238028916
Synonym: bglu_1g33810
Alternate gene names: NA
Gene position: 3843535-3844329 (Clockwise)
Preceding gene: 238028915
Following gene: 238028917
Centisome position: 98.39
GC content: 71.32
Gene sequence:
>795_bases TTGAGCGGCCCGCGCACGCCTGTCCGGCCCGCGGCCCAACCGGCGCGGCGGCCGGCGCGCCGTGCGCGCCGGGTCCGGCC GCAGGCCGGCCGGCCGGTCTGGCTGTTCGACCTCGACAACACGCTGCATCACGCCTCGCACGCGATCTTCCCGGCCATCA ACGCCGCGATGACGCAGTACATCATCGACACGCTGCAGGTCGATCGCGCCCGCGCCGACCATCTGCGCACGTTCTACACG CGCCGCTACGGCGCCGCCCTGCTCGGGCTCGCACGCCACCATCCGATCGATCCGCACGATTTCCTGAAAGTCGTGCATAC CTTCACGGACCTGCCCTCGATGGTGCGCGGCGAACGCGGGCTCGCGCGCCGCTTGGCGGCGCTGCCGGGCCGCAAGCTGA TCCTGACCAATGCGCCGGAGTCTTACGCGCGCGCGGTGCTCGCCGAACTCGGCATCGAGCGGCTGTTCGAGCGCGTGATC GCGATCGAGCAGATGCGCGACCGCCGCGCCTGGCGCGCCAAGCCCGACGCCGCGATGCTGCGCCGGGCGATCCGCGATGC GCGCGCGCGGCTCGCCGACGCGATCCTCGTCGAGGACACCCGCAGCCATCTGAAGCGCTACAAGGGGCTCGGCATCCGCA CCATCTGGATCACCGGGCACCTGCCCGGCCATCTGCCGCGAATCGGCCGCCCGCACTATGTCGATCGTCGCATTGCTTCG CTACAATCGCTGCGACTGAGCACACGAGCGGGGCGACGCAAATGCAGCCGACTGAACCGCGGGACCCGGCCGTAG
Upstream 100 bases:
>100_bases GCGGCGTCAAGTCGGTCCATATCGTCGACGGCCGCATCGAACACTCGGTGCTGCTCGAGATCCTGACCGAACAGCCGTTC GGCACGATGATCCGCTCGCA
Downstream 100 bases:
>100_bases CCACGGCCGACACGGCCGACACCCGACCTCCGGCGGCCGGCACCGCGCCGCGCCCGCGCGCGCGGCCGAAGCCCGGCGAG CGGCGGGTGCTGATCCTGCA
Product: HAD-superfamily hydrolase
Products: NA
Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; HAD Family Pyrimidine 5-Nucleotidase; HAD Family Hydrolase; Phosphatase; Hydrolase Protein; HAD Superfamily Hydrolase; Haloacid Dehalogenase Superfamily Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Phosphoglycolate Phosphatase
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSGPRTPVRPAAQPARRPARRARRVRPQAGRPVWLFDLDNTLHHASHAIFPAINAAMTQYIIDTLQVDRARADHLRTFYT RRYGAALLGLARHHPIDPHDFLKVVHTFTDLPSMVRGERGLARRLAALPGRKLILTNAPESYARAVLAELGIERLFERVI AIEQMRDRRAWRAKPDAAMLRRAIRDARARLADAILVEDTRSHLKRYKGLGIRTIWITGHLPGHLPRIGRPHYVDRRIAS LQSLRLSTRAGRRKCSRLNRGTRP
Sequences:
>Translated_264_residues MSGPRTPVRPAAQPARRPARRARRVRPQAGRPVWLFDLDNTLHHASHAIFPAINAAMTQYIIDTLQVDRARADHLRTFYT RRYGAALLGLARHHPIDPHDFLKVVHTFTDLPSMVRGERGLARRLAALPGRKLILTNAPESYARAVLAELGIERLFERVI AIEQMRDRRAWRAKPDAAMLRRAIRDARARLADAILVEDTRSHLKRYKGLGIRTIWITGHLPGHLPRIGRPHYVDRRIAS LQSLRLSTRAGRRKCSRLNRGTRP >Mature_263_residues SGPRTPVRPAAQPARRPARRARRVRPQAGRPVWLFDLDNTLHHASHAIFPAINAAMTQYIIDTLQVDRARADHLRTFYTR RYGAALLGLARHHPIDPHDFLKVVHTFTDLPSMVRGERGLARRLAALPGRKLILTNAPESYARAVLAELGIERLFERVIA IEQMRDRRAWRAKPDAAMLRRAIRDARARLADAILVEDTRSHLKRYKGLGIRTIWITGHLPGHLPRIGRPHYVDRRIASL QSLRLSTRAGRRKCSRLNRGTRP
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30168; Mature: 30036
Theoretical pI: Translated: 12.30; Mature: 12.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPRTPVRPAAQPARRPARRARRVRPQAGRPVWLFDLDNTLHHASHAIFPAINAAMTQY CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH IIDTLQVDRARADHLRTFYTRRYGAALLGLARHHPIDPHDFLKVVHTFTDLPSMVRGERG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHH LARRLAALPGRKLILTNAPESYARAVLAELGIERLFERVIAIEQMRDRRAWRAKPDAAML HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RRAIRDARARLADAILVEDTRSHLKRYKGLGIRTIWITGHLPGHLPRIGRPHYVDRRIAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHH LQSLRLSTRAGRRKCSRLNRGTRP HHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SGPRTPVRPAAQPARRPARRARRVRPQAGRPVWLFDLDNTLHHASHAIFPAINAAMTQY CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH IIDTLQVDRARADHLRTFYTRRYGAALLGLARHHPIDPHDFLKVVHTFTDLPSMVRGERG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHH LARRLAALPGRKLILTNAPESYARAVLAELGIERLFERVIAIEQMRDRRAWRAKPDAAML HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RRAIRDARARLADAILVEDTRSHLKRYKGLGIRTIWITGHLPGHLPRIGRPHYVDRRIAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHH LQSLRLSTRAGRRKCSRLNRGTRP HHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA