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The map label for this gene is xerC [H]

Identifier: 238028907

GI number: 238028907

Start: 3833407

End: 3834327

Strand: Direct

Name: xerC [H]

Synonym: bglu_1g33720

Alternate gene names: 238028907

Gene position: 3833407-3834327 (Clockwise)

Preceding gene: 238028906

Following gene: 238028908

Centisome position: 98.13

GC content: 73.29

Gene sequence:

>921_bases
ATGAACGACGAGCCGATCGCCGCCTACCTGTCGTACCTGCAGCACGTCAGGCAGCTGTCGGCGCACACGCTGCGCGGCTA
CGCGCACGAACTCGCCGCGCTCACCGCGTTCGCGAGCGGCCGGCCGCTCGCGAGCCTCACCGCCGCCGACATGCGCAGCG
CGGTGGCGCGCGCGCACGCGGGCGGGCTGTCGGCGCGCTCGATCGCGCACCGGCTGTCGGCCTGGCGCGCGTTCTACCGC
TGGTACGCGCAGCGGGTCGAGATGCCGGCCAACCCGGTGGCGACGGTGCGCGCGCCCAAGCGCGCGCGCGCGCTGCCGAA
GGCGCTGTCGGTCGACGACGCCAACACGCTGATGGAGTCGGCGTTCCCGGACACCCCCGAGGGGCTGCGCGACCGCGCGA
TCGTCGAGCTGTTCTATTCGTCGGGACTGCGGCTCGCGGAGCTGGTCGGGCTCGACGTCCATTACGTCAACGCCGACGGC
TACCGCTCGGCGGGCTGGCTCGATCGCGGCGAGGCCGAGCTCAGCGTGCTCGGCAAGGGCGGCAAGGAGCGCAAGGTGCC
GGTGGGCCGCAAGGCGCTGGAGGCGCTCGACGCCTGGCTCGCGGTGCGCGAGGGCTGGGTGCGCGGCGATCCGCACCCGC
TGTTCCTGTCGGTGCGCGGCAACCGCATGGCGCCCGGCGTGGTGCGCGAGCGCGTCAAGCGCGCGGCGCGCGTGGCCGGG
ATTCCCGCCAACGTCCATCCGCACGTGCTGCGCCACTCGTTCGCGACCCACGTGCTGCAGTCGAGCGGCGACCTGCGCGC
CGTGCAGGAACTGCTCGGCCACGCCAGCATCTCGGCCACCCAGGTCTATACCTCGCTCGACTTCCAGCATCTCGCGCGCA
TCTACGACAGCGCGCATCCGCGCGCGAAGAAGCGCGACTGA

Upstream 100 bases:

>100_bases
TTTCACGACGGCATGGGCACCGATTTCCTGACGCAGATCGGCACGCTCGCGAGCGCCGCGCTCACGCGCCTGCTGCCGCA
CTGACGCATTCGCCCGCGCC

Downstream 100 bases:

>100_bases
CGGCGCCCCGGCACGCCGCCCCGCCGCCGTCTGCTTCGCGAGCCTTTGTTGCCGCCGCGCCCCGCGCGGCCCGAACCGAT
ACCGACATGCAAACCGTTAC

Product: site-specific tyrosine recombinase XerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MNDEPIAAYLSYLQHVRQLSAHTLRGYAHELAALTAFASGRPLASLTAADMRSAVARAHAGGLSARSIAHRLSAWRAFYR
WYAQRVEMPANPVATVRAPKRARALPKALSVDDANTLMESAFPDTPEGLRDRAIVELFYSSGLRLAELVGLDVHYVNADG
YRSAGWLDRGEAELSVLGKGGKERKVPVGRKALEALDAWLAVREGWVRGDPHPLFLSVRGNRMAPGVVRERVKRAARVAG
IPANVHPHVLRHSFATHVLQSSGDLRAVQELLGHASISATQVYTSLDFQHLARIYDSAHPRAKKRD

Sequences:

>Translated_306_residues
MNDEPIAAYLSYLQHVRQLSAHTLRGYAHELAALTAFASGRPLASLTAADMRSAVARAHAGGLSARSIAHRLSAWRAFYR
WYAQRVEMPANPVATVRAPKRARALPKALSVDDANTLMESAFPDTPEGLRDRAIVELFYSSGLRLAELVGLDVHYVNADG
YRSAGWLDRGEAELSVLGKGGKERKVPVGRKALEALDAWLAVREGWVRGDPHPLFLSVRGNRMAPGVVRERVKRAARVAG
IPANVHPHVLRHSFATHVLQSSGDLRAVQELLGHASISATQVYTSLDFQHLARIYDSAHPRAKKRD
>Mature_306_residues
MNDEPIAAYLSYLQHVRQLSAHTLRGYAHELAALTAFASGRPLASLTAADMRSAVARAHAGGLSARSIAHRLSAWRAFYR
WYAQRVEMPANPVATVRAPKRARALPKALSVDDANTLMESAFPDTPEGLRDRAIVELFYSSGLRLAELVGLDVHYVNADG
YRSAGWLDRGEAELSVLGKGGKERKVPVGRKALEALDAWLAVREGWVRGDPHPLFLSVRGNRMAPGVVRERVKRAARVAG
IPANVHPHVLRHSFATHVLQSSGDLRAVQELLGHASISATQVYTSLDFQHLARIYDSAHPRAKKRD

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG4973

COG function: function code L; Site-specific recombinase XerC

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790244, Length=302, Percent_Identity=47.0198675496689, Blast_Score=253, Evalue=1e-68,
Organism=Escherichia coli, GI1789261, Length=302, Percent_Identity=34.1059602649007, Blast_Score=157, Evalue=6e-40,
Organism=Escherichia coli, GI1790768, Length=173, Percent_Identity=32.3699421965318, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1790767, Length=195, Percent_Identity=25.1282051282051, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011931 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 33579; Mature: 33579

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDEPIAAYLSYLQHVRQLSAHTLRGYAHELAALTAFASGRPLASLTAADMRSAVARAHA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
GGLSARSIAHRLSAWRAFYRWYAQRVEMPANPVATVRAPKRARALPKALSVDDANTLMES
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCHHHHCCCHHHHHHHH
AFPDTPEGLRDRAIVELFYSSGLRLAELVGLDVHYVNADGYRSAGWLDRGEAELSVLGKG
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEECCC
GKERKVPVGRKALEALDAWLAVREGWVRGDPHPLFLSVRGNRMAPGVVRERVKRAARVAG
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCC
IPANVHPHVLRHSFATHVLQSSGDLRAVQELLGHASISATQVYTSLDFQHLARIYDSAHP
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCC
RAKKRD
CCCCCC
>Mature Secondary Structure
MNDEPIAAYLSYLQHVRQLSAHTLRGYAHELAALTAFASGRPLASLTAADMRSAVARAHA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
GGLSARSIAHRLSAWRAFYRWYAQRVEMPANPVATVRAPKRARALPKALSVDDANTLMES
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCHHHHCCCHHHHHHHH
AFPDTPEGLRDRAIVELFYSSGLRLAELVGLDVHYVNADGYRSAGWLDRGEAELSVLGKG
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEECCC
GKERKVPVGRKALEALDAWLAVREGWVRGDPHPLFLSVRGNRMAPGVVRERVKRAARVAG
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCC
IPANVHPHVLRHSFATHVLQSSGDLRAVQELLGHASISATQVYTSLDFQHLARIYDSAHP
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCC
RAKKRD
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA