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The map label for this gene is aidB [H]

Identifier: 238028894

GI number: 238028894

Start: 3820058

End: 3821734

Strand: Direct

Name: aidB [H]

Synonym: bglu_1g33590

Alternate gene names: 238028894

Gene position: 3820058-3821734 (Clockwise)

Preceding gene: 238028892

Following gene: 238028895

Centisome position: 97.79

GC content: 72.99

Gene sequence:

>1677_bases
ATGGATCAGCAGGCACCGGCGGCCACGCATCAGGTCACGAACCAGGCCCCGCCGCTCACCGACTACAACGCGTTTGAAAC
CGACCTCGCGCTCGCGAGTGCCGTCGAGCGGCACGGCGCGCCCTGGCATCGAACGGCGCTGGCGCGCCACGGCGCGGCGC
TGACCACGGCCGACACGCTCGCGCTGGCCGAACTCGCCAATCGCCATCCCCCCGAGCTCGCCACGCACAGCCCGCGCGGC
GAGCGGCTCGACGCGCTCGAATTCCACCCGAGCTGGCACCAGTTGCTCGCGCTGCTGCGCGGCGAGGGATTGCACGCGCT
GCCGTTTTCGGAGCCGCGCGCCGGCGCGATGGCCGCGCGCTGCGCCGGCTATTTCCTGCACGCGCAGCTCGAATCGGGCT
CGCTGTGCCCGCTGACCATGACCTTCGCGAGCATTCCCGTGCTGCAGAAGGAGCCGGCCCTGTTCGCGACGCTGCGCGAG
CGGCTCTACACGCGCGAGCACGACCCGCGCGACGTGCCGCTGGCGGCCAAGCGCTCGATGATGGTCGGCATGGGCATGAC
CGAGAAGCAGGGCGGCTCCGACGTGCGCAGCAACGAGACGCGCGCGTTCGCGCTCGGCGCGTCCGGGCGCGGCGAGGCGT
ACCGGCTGGTGGGCCACAAGTGGTTCTTCTCGGCGCCGCAATGCGATGCCCACCTGGTGCTCGCGCGCAGCGCCGAGCAC
GCCGGCATCTCGTGTTTCTACGTGCCGCGCTTCACGCCCGACGGCGCGAAGAACGCGGTGCAGATCCAGCGCCTCAAGGA
CAAGCTCGGCAACCGCTCGAACGCGAGCGGCGAGGTGGAGTTCCTCGATGCCTACGGCGTGATGGTGGGCGAGGAAGGCC
GCGGCGTGCCGACCATCATCGAGATGGCGAACCTGACGCGGCTCGACTGCGTGATCGGCAGCGCCGCGCTGATGCGCGCG
GCGCTCGTGCAGGCGATCCATCATGCGCGGCACCGCCACGCGTTCGGCCGCCGGCTCGCCGACCAGCCGCTGATGCGCAA
CGTGCTCGCCGATCTCGCGCTCGAATCGGAGGCGGCCACGCTGCTGTTCATGCGCCTCGCCGACGCGGTCGAGCACGACG
ACGGCCGCGACGCCGAGGCGCGCGGCTGGCGCCGCATCGTCACGCCGGCCGCGAAGTTCTGGGTCTGCAAGCGCGCGCTC
GAATTCACCGGCGAGGCGATGGAAGTGTGGGGCGGCAACGGCTACGTCGAGACCGGCCCGATGGCGCGCTTCTATCGCGA
GGCGCCCGTCAATTCGATCTGGGAAGGCTCCGGCAACGTGATGTGCCTCGACGTGCTGCGCGCGATCGAGCGCGAGCCCG
ACGCGGCCGCCGCGCTCGCCGCGGCCTGGCGCGCCGATCTCGGCGAACGCCGCGAGGTGCGGCGCGCGCTCGACGACCTG
CTCGCGACGCTGGCCGCGCCGGCCGAGACCCGCGAGGCCTCGGCGCGGCGCATCGCGCAGCGCATCGCGCTGCTCGCGCA
GGCCGCGCTGCTGGCACGCCACGCGCCCGCCGAGGTCGCCGACGCGTTCATCGCGACGCGCTTCGGCGCGGCGAGCCCCG
AGACGGGACGTGTCTACGGCACGCTGCCCGCGAGCTTCGACCACGGCGCGCTGGTGGCGCGCGCGTTCCCGGCCTGA

Upstream 100 bases:

>100_bases
CTCTAAACGCCGGCGGCATCCGGCCGTAAGATTGCCGGATTCGCCTCGCGCGGCAGCGGGCGGTTTTGCAGTTGCGCGCC
GCGAAATGGGAGACACCGGC

Downstream 100 bases:

>100_bases
CCCGCGGCCCGAGCCGGCCCGACACCGGGCCGCCAGCCGCTCCGAGGAGACGAGATGAAAAACGACCTGCCCGGCCTCAC
GACGCTCGACGCGCTGCTGC

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MDQQAPAATHQVTNQAPPLTDYNAFETDLALASAVERHGAPWHRTALARHGAALTTADTLALAELANRHPPELATHSPRG
ERLDALEFHPSWHQLLALLRGEGLHALPFSEPRAGAMAARCAGYFLHAQLESGSLCPLTMTFASIPVLQKEPALFATLRE
RLYTREHDPRDVPLAAKRSMMVGMGMTEKQGGSDVRSNETRAFALGASGRGEAYRLVGHKWFFSAPQCDAHLVLARSAEH
AGISCFYVPRFTPDGAKNAVQIQRLKDKLGNRSNASGEVEFLDAYGVMVGEEGRGVPTIIEMANLTRLDCVIGSAALMRA
ALVQAIHHARHRHAFGRRLADQPLMRNVLADLALESEAATLLFMRLADAVEHDDGRDAEARGWRRIVTPAAKFWVCKRAL
EFTGEAMEVWGGNGYVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAIEREPDAAAALAAAWRADLGERREVRRALDDL
LATLAAPAETREASARRIAQRIALLAQAALLARHAPAEVADAFIATRFGAASPETGRVYGTLPASFDHGALVARAFPA

Sequences:

>Translated_558_residues
MDQQAPAATHQVTNQAPPLTDYNAFETDLALASAVERHGAPWHRTALARHGAALTTADTLALAELANRHPPELATHSPRG
ERLDALEFHPSWHQLLALLRGEGLHALPFSEPRAGAMAARCAGYFLHAQLESGSLCPLTMTFASIPVLQKEPALFATLRE
RLYTREHDPRDVPLAAKRSMMVGMGMTEKQGGSDVRSNETRAFALGASGRGEAYRLVGHKWFFSAPQCDAHLVLARSAEH
AGISCFYVPRFTPDGAKNAVQIQRLKDKLGNRSNASGEVEFLDAYGVMVGEEGRGVPTIIEMANLTRLDCVIGSAALMRA
ALVQAIHHARHRHAFGRRLADQPLMRNVLADLALESEAATLLFMRLADAVEHDDGRDAEARGWRRIVTPAAKFWVCKRAL
EFTGEAMEVWGGNGYVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAIEREPDAAAALAAAWRADLGERREVRRALDDL
LATLAAPAETREASARRIAQRIALLAQAALLARHAPAEVADAFIATRFGAASPETGRVYGTLPASFDHGALVARAFPA
>Mature_558_residues
MDQQAPAATHQVTNQAPPLTDYNAFETDLALASAVERHGAPWHRTALARHGAALTTADTLALAELANRHPPELATHSPRG
ERLDALEFHPSWHQLLALLRGEGLHALPFSEPRAGAMAARCAGYFLHAQLESGSLCPLTMTFASIPVLQKEPALFATLRE
RLYTREHDPRDVPLAAKRSMMVGMGMTEKQGGSDVRSNETRAFALGASGRGEAYRLVGHKWFFSAPQCDAHLVLARSAEH
AGISCFYVPRFTPDGAKNAVQIQRLKDKLGNRSNASGEVEFLDAYGVMVGEEGRGVPTIIEMANLTRLDCVIGSAALMRA
ALVQAIHHARHRHAFGRRLADQPLMRNVLADLALESEAATLLFMRLADAVEHDDGRDAEARGWRRIVTPAAKFWVCKRAL
EFTGEAMEVWGGNGYVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAIEREPDAAAALAAAWRADLGERREVRRALDDL
LATLAAPAETREASARRIAQRIALLAQAALLARHAPAEVADAFIATRFGAASPETGRVYGTLPASFDHGALVARAFPA

Specific function: May help to prevent alkylation damage by protecting DNA and destroying alkylating agents [H]

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=267, Percent_Identity=28.8389513108614, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI226958412, Length=276, Percent_Identity=28.9855072463768, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI226958414, Length=276, Percent_Identity=28.9855072463768, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI4501859, Length=274, Percent_Identity=27.007299270073, Blast_Score=83, Evalue=9e-16,
Organism=Homo sapiens, GI7656849, Length=273, Percent_Identity=27.4725274725275, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI187960098, Length=279, Percent_Identity=26.1648745519713, Blast_Score=78, Evalue=3e-14,
Organism=Homo sapiens, GI4557231, Length=279, Percent_Identity=26.1648745519713, Blast_Score=77, Evalue=4e-14,
Organism=Escherichia coli, GI87082384, Length=517, Percent_Identity=49.9032882011605, Blast_Score=471, Evalue=1e-134,
Organism=Escherichia coli, GI87081958, Length=279, Percent_Identity=25.8064516129032, Blast_Score=67, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI86563381, Length=578, Percent_Identity=28.8927335640138, Blast_Score=176, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI86563383, Length=578, Percent_Identity=28.8927335640138, Blast_Score=176, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI17538396, Length=296, Percent_Identity=27.7027027027027, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17508101, Length=311, Percent_Identity=26.0450160771704, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17506239, Length=298, Percent_Identity=26.510067114094, Blast_Score=90, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71990804, Length=229, Percent_Identity=28.3842794759825, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17533517, Length=275, Percent_Identity=25.4545454545455, Blast_Score=71, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17569725, Length=273, Percent_Identity=24.9084249084249, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17505929, Length=282, Percent_Identity=28.0141843971631, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17551932, Length=271, Percent_Identity=26.5682656826568, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17534899, Length=294, Percent_Identity=22.7891156462585, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21356377, Length=274, Percent_Identity=27.3722627737226, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24646207, Length=274, Percent_Identity=25.1824817518248, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21355753, Length=298, Percent_Identity=23.8255033557047, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24660351, Length=273, Percent_Identity=26.007326007326, Blast_Score=70, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M [H]

EC number: NA

Molecular weight: Translated: 60605; Mature: 60605

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: PS00072 ACYL_COA_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQQAPAATHQVTNQAPPLTDYNAFETDLALASAVERHGAPWHRTALARHGAALTTADTL
CCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHH
ALAELANRHPPELATHSPRGERLDALEFHPSWHQLLALLRGEGLHALPFSEPRAGAMAAR
HHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCEECCCCCCCHHHHHHH
CAGYFLHAQLESGSLCPLTMTFASIPVLQKEPALFATLRERLYTREHDPRDVPLAAKRSM
HHHEEEEEEECCCCCCCEEHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH
MVGMGMTEKQGGSDVRSNETRAFALGASGRGEAYRLVGHKWFFSAPQCDAHLVLARSAEH
HHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCEEECCCCCCCCEEEEEECCCC
AGISCFYVPRFTPDGAKNAVQIQRLKDKLGNRSNASGEVEFLDAYGVMVGEEGRGVPTII
CCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEECCCCCCCHHHH
EMANLTRLDCVIGSAALMRAALVQAIHHARHRHAFGRRLADQPLMRNVLADLALESEAAT
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHH
LLFMRLADAVEHDDGRDAEARGWRRIVTPAAKFWVCKRALEFTGEAMEVWGGNGYVETGP
HHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCEEECCH
MARFYREAPVNSIWEGSGNVMCLDVLRAIEREPDAAAALAAAWRADLGERREVRRALDDL
HHHHHHHCCCCHHHCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
LATLAAPAETREASARRIAQRIALLAQAALLARHAPAEVADAFIATRFGAASPETGRVYG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEE
TLPASFDHGALVARAFPA
ECCCCCCCCCHHHCCCCC
>Mature Secondary Structure
MDQQAPAATHQVTNQAPPLTDYNAFETDLALASAVERHGAPWHRTALARHGAALTTADTL
CCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHH
ALAELANRHPPELATHSPRGERLDALEFHPSWHQLLALLRGEGLHALPFSEPRAGAMAAR
HHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCEECCCCCCCHHHHHHH
CAGYFLHAQLESGSLCPLTMTFASIPVLQKEPALFATLRERLYTREHDPRDVPLAAKRSM
HHHEEEEEEECCCCCCCEEHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH
MVGMGMTEKQGGSDVRSNETRAFALGASGRGEAYRLVGHKWFFSAPQCDAHLVLARSAEH
HHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCEEECCCCCCCCEEEEEECCCC
AGISCFYVPRFTPDGAKNAVQIQRLKDKLGNRSNASGEVEFLDAYGVMVGEEGRGVPTII
CCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEECCCCCCCHHHH
EMANLTRLDCVIGSAALMRAALVQAIHHARHRHAFGRRLADQPLMRNVLADLALESEAAT
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHH
LLFMRLADAVEHDDGRDAEARGWRRIVTPAAKFWVCKRALEFTGEAMEVWGGNGYVETGP
HHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCEEECCH
MARFYREAPVNSIWEGSGNVMCLDVLRAIEREPDAAAALAAAWRADLGERREVRRALDDL
HHHHHHHCCCCHHHCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
LATLAAPAETREASARRIAQRIALLAQAALLARHAPAEVADAFIATRFGAASPETGRVYG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEE
TLPASFDHGALVARAFPA
ECCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961409; 7610040; 9278503 [H]