Click here to switch to the map view.

The map label for this gene is fliK [H]

Identifier: 238028892

GI number: 238028892

Start: 3816936

End: 3817970

Strand: Direct

Name: fliK [H]

Synonym: bglu_1g33570

Alternate gene names: 238028892

Gene position: 3816936-3817970 (Clockwise)

Preceding gene: 238028891

Following gene: 238028894

Centisome position: 97.71

GC content: 77.1

Gene sequence:

>1035_bases
GTGCAGGCGCAGCTGCAGGCAAGCCAGGACGCGGCCAGCGGCAACCCGGCGGACGGCAGCGCCGCCCAGACCGCCGCTGC
GGCGCTGGCAGCGAACGCGGCCGGCCAGGCCGACGCCAAGGCCGCCGCGGCGCTCGCGAACACAGACGCCGACGCGGCGC
CGGCCGGCGCGGGCGGCAACTCCATCGCGAGCGCGCTGCAGGCCGCGCTCGACCATCTGCAAAGCGGCGGCGCGAACGGC
GCGGCCGCCCCCGTGCTGGCGGCGCGCGGCGGCAGCGGCGGCGGCGCGGGCGGCCAGGCCGGCGCGCATCTGGCCGCCGC
GGGCAACGGCGCCGCAGGCGCCGATCGCAACCCGGTCAACGCGGTCTCGCCGTCCGGCTCGTCGGCCTACGCGGCCGCGG
CGAACGCGGCCGCCAGTTCGCCAGCGAACACCCAGCACGTCGACACCACGGCCGTCACGTCGGCCGATCCGAACGCGGCC
CAGACCGCGCTGGCCGCCGCCGCCTCGCAGCAGGCCGCGCCGCTCGCGCAGACGGCGGCCGCCACCACCGCCGGCGCGGC
CGCCACGGAACTGGCGATCGGGCCGCGCGTGGGCACTCCCGACTGGAGCGACGCGCTGAGCCAGAAGGTGGTGTTCCTCT
CGAACGCACACCAGCAGAGCGCCGCACTGACGCTGAACCCGCCCGATCTCGGCCCGCTGCAGGTGGTGCTCAACGTGGCC
GACAACCACGCGCATGCGCTGTTCGTGTCGCAGCATCCGCAGGTGCGCGAGGCGGTCGAGGCAGCGCTGCCGAAGCTGCG
CGAGGCGATGGAAGCGGGCGGCCTGAGCCTGGGCAGCGCCAACGTCAGCGACGGCGGCGCCGGATTCGCCCGGCAGGACG
CGCAACGGCAAGCGTCGGACGCAAGCGCGACGCGACGCGCGGGCGGTGCGTTCGGAGCCGGCGGGACGGGCGAGGACGCG
CTCGCCGGGATCGCTGCGACAGCGTCCAGCGGCGCGACGCAGCGGCGCGTCGGGATGGTCGATACGTTCGCGTAA

Upstream 100 bases:

>100_bases
GGCCACCGCGTGTCGGACCAAGACCACCGGCTCGGACCCGCAGGATGCGCAGAGCGCGTCCACGCCGGCCGAGGCGACCG
CGCTCGCGGCGGCCGCGACC

Downstream 100 bases:

>100_bases
GCACCTCCGGAATCAGCGGGTCGGCAGCGGGGGGCCGGGCAGGCGATCGGCCCGCCGGGCCGGCCCGGCCATTCTGCCTG
CGCCCGCGCAGTTACGCCGG

Product: flagellar hook-length control protein FliK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MQAQLQASQDAASGNPADGSAAQTAAAALAANAAGQADAKAAAALANTDADAAPAGAGGNSIASALQAALDHLQSGGANG
AAAPVLAARGGSGGGAGGQAGAHLAAAGNGAAGADRNPVNAVSPSGSSAYAAAANAAASSPANTQHVDTTAVTSADPNAA
QTALAAAASQQAAPLAQTAAATTAGAAATELAIGPRVGTPDWSDALSQKVVFLSNAHQQSAALTLNPPDLGPLQVVLNVA
DNHAHALFVSQHPQVREAVEAALPKLREAMEAGGLSLGSANVSDGGAGFARQDAQRQASDASATRRAGGAFGAGGTGEDA
LAGIAATASSGATQRRVGMVDTFA

Sequences:

>Translated_344_residues
MQAQLQASQDAASGNPADGSAAQTAAAALAANAAGQADAKAAAALANTDADAAPAGAGGNSIASALQAALDHLQSGGANG
AAAPVLAARGGSGGGAGGQAGAHLAAAGNGAAGADRNPVNAVSPSGSSAYAAAANAAASSPANTQHVDTTAVTSADPNAA
QTALAAAASQQAAPLAQTAAATTAGAAATELAIGPRVGTPDWSDALSQKVVFLSNAHQQSAALTLNPPDLGPLQVVLNVA
DNHAHALFVSQHPQVREAVEAALPKLREAMEAGGLSLGSANVSDGGAGFARQDAQRQASDASATRRAGGAFGAGGTGEDA
LAGIAATASSGATQRRVGMVDTFA
>Mature_344_residues
MQAQLQASQDAASGNPADGSAAQTAAAALAANAAGQADAKAAAALANTDADAAPAGAGGNSIASALQAALDHLQSGGANG
AAAPVLAARGGSGGGAGGQAGAHLAAAGNGAAGADRNPVNAVSPSGSSAYAAAANAAASSPANTQHVDTTAVTSADPNAA
QTALAAAASQQAAPLAQTAAATTAGAAATELAIGPRVGTPDWSDALSQKVVFLSNAHQQSAALTLNPPDLGPLQVVLNVA
DNHAHALFVSQHPQVREAVEAALPKLREAMEAGGLSLGSANVSDGGAGFARQDAQRQASDASATRRAGGAFGAGGTGEDA
LAGIAATASSGATQRRVGMVDTFA

Specific function: Controls the length of the flagellar hook [H]

COG id: COG3144

COG function: function code N; Flagellar hook-length control protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliK family [H]

Homologues:

Organism=Escherichia coli, GI1788253, Length=94, Percent_Identity=43.6170212765958, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001635
- InterPro:   IPR021136 [H]

Pfam domain/function: PF02120 Flg_hook [H]

EC number: NA

Molecular weight: Translated: 32420; Mature: 32420

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAQLQASQDAASGNPADGSAAQTAAAALAANAAGQADAKAAAALANTDADAAPAGAGGN
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHH
SIASALQAALDHLQSGGANGAAAPVLAARGGSGGGAGGQAGAHLAAAGNGAAGADRNPVN
HHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
AVSPSGSSAYAAAANAAASSPANTQHVDTTAVTSADPNAAQTALAAAASQQAAPLAQTAA
CCCCCCCCHHHHHHHHHCCCCCCCCCCCHHEECCCCCHHHHHHHHHHHHHHCCHHHHHHH
ATTAGAAATELAIGPRVGTPDWSDALSQKVVFLSNAHQQSAALTLNPPDLGPLQVVLNVA
HHHCCCHHHHHEECCCCCCCCHHHHHHHEEEEEECCCCCCCEEEECCCCCCHHHHHHHHC
DNHAHALFVSQHPQVREAVEAALPKLREAMEAGGLSLGSANVSDGGAGFARQDAQRQASD
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
ASATRRAGGAFGAGGTGEDALAGIAATASSGATQRRVGMVDTFA
HHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCHHCCC
>Mature Secondary Structure
MQAQLQASQDAASGNPADGSAAQTAAAALAANAAGQADAKAAAALANTDADAAPAGAGGN
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHH
SIASALQAALDHLQSGGANGAAAPVLAARGGSGGGAGGQAGAHLAAAGNGAAGADRNPVN
HHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
AVSPSGSSAYAAAANAAASSPANTQHVDTTAVTSADPNAAQTALAAAASQQAAPLAQTAA
CCCCCCCCHHHHHHHHHCCCCCCCCCCCHHEECCCCCHHHHHHHHHHHHHHCCHHHHHHH
ATTAGAAATELAIGPRVGTPDWSDALSQKVVFLSNAHQQSAALTLNPPDLGPLQVVLNVA
HHHCCCHHHHHEECCCCCCCCHHHHHHHEEEEEECCCCCCCEEEECCCCCCHHHHHHHHC
DNHAHALFVSQHPQVREAVEAALPKLREAMEAGGLSLGSANVSDGGAGFARQDAQRQASD
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
ASATRRAGGAFGAGGTGEDALAGIAATASSGATQRRVGMVDTFA
HHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631687; 9097040; 9278503 [H]