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The map label for this gene is ybhP [H]

Identifier: 238028875

GI number: 238028875

Start: 3799213

End: 3800019

Strand: Direct

Name: ybhP [H]

Synonym: bglu_1g33400

Alternate gene names: 238028875

Gene position: 3799213-3800019 (Clockwise)

Preceding gene: 238028874

Following gene: 238028876

Centisome position: 97.25

GC content: 71.38

Gene sequence:

>807_bases
ATGCATGCCTCCGGAGCCCTGCCGTTCGCCGAGCCGCGAACGGCCCCGAACGAGATCACCGCGGTCAGCTGGAACCTGCA
CAAGGGCCGCTCGCCGCTCGGCTTCACCGCCTGGAACGCGATGCGCCGCTGGGTCGAGTCGACGCATGCGGATATCTACT
TCCTGCAGGAGGCGATGGCGCGGCGCATGCCGCGGCCGGTGCTGGCGGCCGGCTTCGGCGCGCCGATGGACGACCCCGTC
GACGACGTCTGGCATTGCCAGGCCACCGAGATCGCGCGCGCCCTCGACTGGCAGATCGCGCTCGGCCCGAACGTGTTCAA
GCCGTCGTGGCGGCACGGCAACGCGATCCTCTCGCCGCATCCGCTCGACCTCGGCGGCAGGTGGGATATCTCGGCGCACC
GCTTCGAACGACGCGGGCTGCTGGTGGCGCGCGCCACGCTGGCCGGCAGCGCGCCGATCACGCTGCTGTGCGCGCACCTC
GCGCTCACGCGCGCCGCGCGGCTGCGGCAGATGACCTGGATCGCGCACTGGATCGAGCATCACGCGCAGGAAGGCCCGCT
CGTGCTGGCCGGCGATTTCAACGACTGGCGCAACGATTCGGTGCCGCTGTTCGGCGAGATCGGGCTCGCCGAGGTGGCCA
CGCTGCTCGGCGAATCGGGCCGCACGTTCCCGGCGTTCTCGCCCGCGCTGGCGCTCGACAAGATGTTCGTGCGCGGCTTC
ACGCCGCTGGAATGGCGCGCGCCCGGCGAGGACACGGCCTGGCTGTCCGACCATCTGCCCTACATCGCGCGGCTGCGCAT
CGACTGA

Upstream 100 bases:

>100_bases
TGCATGGCGACAGCTGGACCGACTGGGCGCCCGCCGACAAGGCCGCGCGGCTGGTCTACCAGGTGCGCGCGCACGTCGTC
GCGAACTGAGGCCGATGCCG

Downstream 100 bases:

>100_bases
CGGCGCGCCGCTTTCCCATGGCTTTCCCGCGGTCCTGGCGGCGCTTCATGGCCGCGAAGGCTGCCGTCCGGCGCGCGCCG
GACGTGGCCCGGCGGCCCGC

Product: endonuclease/exonuclease/phosphatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MHASGALPFAEPRTAPNEITAVSWNLHKGRSPLGFTAWNAMRRWVESTHADIYFLQEAMARRMPRPVLAAGFGAPMDDPV
DDVWHCQATEIARALDWQIALGPNVFKPSWRHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLAGSAPITLLCAHL
ALTRAARLRQMTWIAHWIEHHAQEGPLVLAGDFNDWRNDSVPLFGEIGLAEVATLLGESGRTFPAFSPALALDKMFVRGF
TPLEWRAPGEDTAWLSDHLPYIARLRID

Sequences:

>Translated_268_residues
MHASGALPFAEPRTAPNEITAVSWNLHKGRSPLGFTAWNAMRRWVESTHADIYFLQEAMARRMPRPVLAAGFGAPMDDPV
DDVWHCQATEIARALDWQIALGPNVFKPSWRHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLAGSAPITLLCAHL
ALTRAARLRQMTWIAHWIEHHAQEGPLVLAGDFNDWRNDSVPLFGEIGLAEVATLLGESGRTFPAFSPALALDKMFVRGF
TPLEWRAPGEDTAWLSDHLPYIARLRID
>Mature_268_residues
MHASGALPFAEPRTAPNEITAVSWNLHKGRSPLGFTAWNAMRRWVESTHADIYFLQEAMARRMPRPVLAAGFGAPMDDPV
DDVWHCQATEIARALDWQIALGPNVFKPSWRHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLAGSAPITLLCAHL
ALTRAARLRQMTWIAHWIEHHAQEGPLVLAGDFNDWRNDSVPLFGEIGLAEVATLLGESGRTFPAFSPALALDKMFVRGF
TPLEWRAPGEDTAWLSDHLPYIARLRID

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=266, Percent_Identity=31.9548872180451, Blast_Score=104, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 29866; Mature: 29866

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHASGALPFAEPRTAPNEITAVSWNLHKGRSPLGFTAWNAMRRWVESTHADIYFLQEAMA
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
RRMPRPVLAAGFGAPMDDPVDDVWHCQATEIARALDWQIALGPNVFKPSWRHGNAILSPH
HHCCCCEEHHCCCCCCCCCHHHHHCCCHHHHHHHHCCEEEECCCCCCCCCCCCCEECCCC
PLDLGGRWDISAHRFERRGLLVARATLAGSAPITLLCAHLALTRAARLRQMTWIAHWIEH
CCCCCCEECCHHHHHHHCCEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HAQEGPLVLAGDFNDWRNDSVPLFGEIGLAEVATLLGESGRTFPAFSPALALDKMFVRGF
HCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC
TPLEWRAPGEDTAWLSDHLPYIARLRID
CCCCCCCCCCCCCHHHHCCCEEEEEECC
>Mature Secondary Structure
MHASGALPFAEPRTAPNEITAVSWNLHKGRSPLGFTAWNAMRRWVESTHADIYFLQEAMA
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
RRMPRPVLAAGFGAPMDDPVDDVWHCQATEIARALDWQIALGPNVFKPSWRHGNAILSPH
HHCCCCEEHHCCCCCCCCCHHHHHCCCHHHHHHHHCCEEEECCCCCCCCCCCCCEECCCC
PLDLGGRWDISAHRFERRGLLVARATLAGSAPITLLCAHLALTRAARLRQMTWIAHWIEH
CCCCCCEECCHHHHHHHCCEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HAQEGPLVLAGDFNDWRNDSVPLFGEIGLAEVATLLGESGRTFPAFSPALALDKMFVRGF
HCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC
TPLEWRAPGEDTAWLSDHLPYIARLRID
CCCCCCCCCCCCCHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]