Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028874

Identifier: 238028874

GI number: 238028874

Start: 3798671

End: 3799201

Strand: Direct

Name: 238028874

Synonym: bglu_1g33390

Alternate gene names: NA

Gene position: 3798671-3799201 (Clockwise)

Preceding gene: 238028864

Following gene: 238028875

Centisome position: 97.24

GC content: 75.14

Gene sequence:

>531_bases
ATGTTTCGCCAGCCCGCCGCGCACAAGGCGCGCGCCGCCCGGCTGCGGCGCCTTGCACGCGGTGCCGCGCTGGCCGCGGC
GCTGACCGGCGCGACGCTCGCCGCCCGGGCACAGGACGCGCCGCAGTCGATCGACTGGGAGGTGCGCGTGGTGCACGCGG
GCCAGACCGTCGATACGTTCCACCACACCACCACGGTCGGCCAGTCGCGCACCGACAGCCACACCTACCCGGTCAGGCTG
CCGGCCGGCTGCCCGGCGAGCGTCGAGGCGTCGGCCGTCGCGGCCGTGAAGCCGGAGCGCACGCGCAGCGTCACCGTCGC
CCCGCTCTACGTGGACGGCAACACGGTCACGCTCGCGCTCGACGTGCAGGAGATCGTCGACGACGGCGACGGCTGCTCGC
TGTCGCCGCGCCAGATCTCGGCCAGCCACCCGGGGCTCGCCGTGCATGGCGACAGCTGGACCGACTGGGCGCCCGCCGAC
AAGGCCGCGCGGCTGGTCTACCAGGTGCGCGCGCACGTCGTCGCGAACTGA

Upstream 100 bases:

>100_bases
TTCGCCGCCGTCCCGCCCCGCCCGTCGCCTGCGCGCCGCACCGCGCGCCGCGTCCGCGGCCAGAACGTTTCCCGGTTCGC
TCGTCCCTGCGCTCCTTGCG

Downstream 100 bases:

>100_bases
GGCCGATGCCGATGCATGCCTCCGGAGCCCTGCCGTTCGCCGAGCCGCGAACGGCCCCGAACGAGATCACCGCGGTCAGC
TGGAACCTGCACAAGGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MFRQPAAHKARAARLRRLARGAALAAALTGATLAARAQDAPQSIDWEVRVVHAGQTVDTFHHTTTVGQSRTDSHTYPVRL
PAGCPASVEASAVAAVKPERTRSVTVAPLYVDGNTVTLALDVQEIVDDGDGCSLSPRQISASHPGLAVHGDSWTDWAPAD
KAARLVYQVRAHVVAN

Sequences:

>Translated_176_residues
MFRQPAAHKARAARLRRLARGAALAAALTGATLAARAQDAPQSIDWEVRVVHAGQTVDTFHHTTTVGQSRTDSHTYPVRL
PAGCPASVEASAVAAVKPERTRSVTVAPLYVDGNTVTLALDVQEIVDDGDGCSLSPRQISASHPGLAVHGDSWTDWAPAD
KAARLVYQVRAHVVAN
>Mature_176_residues
MFRQPAAHKARAARLRRLARGAALAAALTGATLAARAQDAPQSIDWEVRVVHAGQTVDTFHHTTTVGQSRTDSHTYPVRL
PAGCPASVEASAVAAVKPERTRSVTVAPLYVDGNTVTLALDVQEIVDDGDGCSLSPRQISASHPGLAVHGDSWTDWAPAD
KAARLVYQVRAHVVAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18614; Mature: 18614

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRQPAAHKARAARLRRLARGAALAAALTGATLAARAQDAPQSIDWEVRVVHAGQTVDTF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEEECCCEEHHH
HHTTTVGQSRTDSHTYPVRLPAGCPASVEASAVAAVKPERTRSVTVAPLYVDGNTVTLAL
HCEEECCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCEEEEEE
DVQEIVDDGDGCSLSPRQISASHPGLAVHGDSWTDWAPADKAARLVYQVRAHVVAN
EHHHHHCCCCCCCCCCCEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFRQPAAHKARAARLRRLARGAALAAALTGATLAARAQDAPQSIDWEVRVVHAGQTVDTF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEEECCCEEHHH
HHTTTVGQSRTDSHTYPVRLPAGCPASVEASAVAAVKPERTRSVTVAPLYVDGNTVTLAL
HCEEECCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCEEEEEE
DVQEIVDDGDGCSLSPRQISASHPGLAVHGDSWTDWAPADKAARLVYQVRAHVVAN
EHHHHHCCCCCCCCCCCEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA