| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028865
Identifier: 238028865
GI number: 238028865
Start: 3788184
End: 3789341
Strand: Reverse
Name: 238028865
Synonym: bglu_1g33300
Alternate gene names: NA
Gene position: 3789341-3788184 (Counterclockwise)
Preceding gene: 238028866
Following gene: 238028861
Centisome position: 97.0
GC content: 74.87
Gene sequence:
>1158_bases GTGACGGGCATGCCTGAAGCCGGGGCGGCGCAGCGGCGCGGCGCGAGCCAGATGGCGCGCCGCCTGCGGGGATGCCGGGT GCGCGGCACGCGCCTGCGCCGGCGTGCCTCGCGACGACGGGCCGGGGCACTCGCGCAGGCGGTGCTGGCGGGCGCCTGCC TGCTGGCCGGGCTCGGCTGGCCGGCCGGCGCCGCGCTGGCCCAGGGCGCCGGCGCCCATGCGCCGCTGAACGGCGCGCGG CTGTCGCCGCCCCTGTCGCTGCCCGGCTTCCACTCGCCGCCGCCCGATCCGACCGTCTCGAGCGGCGCCGTGCGCGCCCA GCCGGCGCGCATGCCGTTCTACGTCGCCACGCGCGGCCGGCTCACCATCTACCTGCTCGGTACGCTGCACGTCGGCGACC CGCGCGACTACCCGCCCGGCGAGCCGTTCCGGCGGCCGATCCTCGCGGCGCTGGCCGCCTCGCCCGTGCTCGCGCTCGAA CTCTCGCCCGACGACCTGCTCGAGTCGGCCGACGACGTCTCGCGCTACGGCGTGTGCCGCTATGCCTGCCTGCCGAAGCT GCTGCCCGAGCCGCTCTGGCAGCGGCTCGCGGCGCGCCTGCGCGGCAATCCGGCCGCGCTCGACGGAATTCGCCGGATGC GGCCGTGGCTCGCCGCGCTGGTGGTGGAAACCTACGACTCGCTGTCGGCCGGGCTGCAGACCGAATACGGCACCGAGGCG CAGCTGCAGAACGTGTTTCTCAAGAAGAAGGGCGCGCGCGTGGTGGGCCTCGAGACGCTGGCCGAGCAGATGCGCGCGTT CACCGGCCTCACGCTCGCCGAGCAGCGCGAGATGCTGGCCCAGGACCTGGTGCAGACGCCGGCGCAGAACGCCGCCGACG TGCAGGCGCTGCACCGGCTGTGGCGCATCGGCGACGCCGACGCGCTGGCCGCCTGGGACAGCGCGAAAGCGGAGCGGCTC GCGCGCTCGCGGCCGGTGGCCGAGGCGATGGACAACAAGATCCTCTACGAGCGCAACCGCCGCTTCGCCGCGCGTTCGAT CGCGCTGGCCGGGGCGAACCGGCCCCTGTTCGTGGCGATCGGTGCCCTGCACCTTGGCGGCCCGAAAGGTGTGATCGAAT TGTTAAAGCGGCAAGGTTTTCGGGTGGACGCCGGTTGA
Upstream 100 bases:
>100_bases CAGCGCTGCCCCTATGCGGTGGAGCGCTGCCGCGCCGAGGTGCCCGCGCTGCGCCAGGTCGATGGACGGCAGGTGGCCTG CCATCGCGCCGAGGAGGTGG
Downstream 100 bases:
>100_bases TGATGGGGAAAACCCACAGTTTTACCGATTTCTTGCGTTTGCCGATTGACATGAAACATTGTCAAAACTATTCTCCATTC CACAGTCGAGTCAACTGTAA
Product: GumN family protein
Products: NA
Alternate protein names: SLA2 Protein; GumN Protein
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MTGMPEAGAAQRRGASQMARRLRGCRVRGTRLRRRASRRRAGALAQAVLAGACLLAGLGWPAGAALAQGAGAHAPLNGAR LSPPLSLPGFHSPPPDPTVSSGAVRAQPARMPFYVATRGRLTIYLLGTLHVGDPRDYPPGEPFRRPILAALAASPVLALE LSPDDLLESADDVSRYGVCRYACLPKLLPEPLWQRLAARLRGNPAALDGIRRMRPWLAALVVETYDSLSAGLQTEYGTEA QLQNVFLKKKGARVVGLETLAEQMRAFTGLTLAEQREMLAQDLVQTPAQNAADVQALHRLWRIGDADALAAWDSAKAERL ARSRPVAEAMDNKILYERNRRFAARSIALAGANRPLFVAIGALHLGGPKGVIELLKRQGFRVDAG
Sequences:
>Translated_385_residues MTGMPEAGAAQRRGASQMARRLRGCRVRGTRLRRRASRRRAGALAQAVLAGACLLAGLGWPAGAALAQGAGAHAPLNGAR LSPPLSLPGFHSPPPDPTVSSGAVRAQPARMPFYVATRGRLTIYLLGTLHVGDPRDYPPGEPFRRPILAALAASPVLALE LSPDDLLESADDVSRYGVCRYACLPKLLPEPLWQRLAARLRGNPAALDGIRRMRPWLAALVVETYDSLSAGLQTEYGTEA QLQNVFLKKKGARVVGLETLAEQMRAFTGLTLAEQREMLAQDLVQTPAQNAADVQALHRLWRIGDADALAAWDSAKAERL ARSRPVAEAMDNKILYERNRRFAARSIALAGANRPLFVAIGALHLGGPKGVIELLKRQGFRVDAG >Mature_384_residues TGMPEAGAAQRRGASQMARRLRGCRVRGTRLRRRASRRRAGALAQAVLAGACLLAGLGWPAGAALAQGAGAHAPLNGARL SPPLSLPGFHSPPPDPTVSSGAVRAQPARMPFYVATRGRLTIYLLGTLHVGDPRDYPPGEPFRRPILAALAASPVLALEL SPDDLLESADDVSRYGVCRYACLPKLLPEPLWQRLAARLRGNPAALDGIRRMRPWLAALVVETYDSLSAGLQTEYGTEAQ LQNVFLKKKGARVVGLETLAEQMRAFTGLTLAEQREMLAQDLVQTPAQNAADVQALHRLWRIGDADALAAWDSAKAERLA RSRPVAEAMDNKILYERNRRFAARSIALAGANRPLFVAIGALHLGGPKGVIELLKRQGFRVDAG
Specific function: Unknown
COG id: COG3735
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41390; Mature: 41259
Theoretical pI: Translated: 11.27; Mature: 11.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGMPEAGAAQRRGASQMARRLRGCRVRGTRLRRRASRRRAGALAQAVLAGACLLAGLGW CCCCCCCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PAGAALAQGAGAHAPLNGARLSPPLSLPGFHSPPPDPTVSSGAVRAQPARMPFYVATRGR CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC LTIYLLGTLHVGDPRDYPPGEPFRRPILAALAASPVLALELSPDDLLESADDVSRYGVCR EEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHH YACLPKLLPEPLWQRLAARLRGNPAALDGIRRMRPWLAALVVETYDSLSAGLQTEYGTEA HHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH QLQNVFLKKKGARVVGLETLAEQMRAFTGLTLAEQREMLAQDLVQTPAQNAADVQALHRL HHHHHHHHHCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH WRIGDADALAAWDSAKAERLARSRPVAEAMDNKILYERNRRFAARSIALAGANRPLFVAI HHCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEE GALHLGGPKGVIELLKRQGFRVDAG ECHHCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TGMPEAGAAQRRGASQMARRLRGCRVRGTRLRRRASRRRAGALAQAVLAGACLLAGLGW CCCCCCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PAGAALAQGAGAHAPLNGARLSPPLSLPGFHSPPPDPTVSSGAVRAQPARMPFYVATRGR CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC LTIYLLGTLHVGDPRDYPPGEPFRRPILAALAASPVLALELSPDDLLESADDVSRYGVCR EEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHH YACLPKLLPEPLWQRLAARLRGNPAALDGIRRMRPWLAALVVETYDSLSAGLQTEYGTEA HHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH QLQNVFLKKKGARVVGLETLAEQMRAFTGLTLAEQREMLAQDLVQTPAQNAADVQALHRL HHHHHHHHHCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH WRIGDADALAAWDSAKAERLARSRPVAEAMDNKILYERNRRFAARSIALAGANRPLFVAI HHCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEE GALHLGGPKGVIELLKRQGFRVDAG ECHHCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA