Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028861

Identifier: 238028861

GI number: 238028861

Start: 3784427

End: 3784942

Strand: Reverse

Name: 238028861

Synonym: bglu_1g33260

Alternate gene names: NA

Gene position: 3784942-3784427 (Counterclockwise)

Preceding gene: 238028865

Following gene: 238028859

Centisome position: 96.89

GC content: 67.05

Gene sequence:

>516_bases
ATGCCGCCGCGTCCCGCCACCAAGATCGTCTCGTCCGAACATCTCGTCTCCGAGACGAGCGCCGAATTGTCCGAACTCGA
ATACGGGCTGATCACGGCGAGCAACGCGTTCAACCGCTGGATGGTGCGCTGCATGGCGGCCGCCGGCGCGAAGGACATGA
CCGCCATCGAGGTCTCGCTGCTGCACTATGTCGGGCATCGCGACCGCAAGAAGAAGCTGGCCGACATCTGCTTCGTGCTC
AATATCGAGGATACGCACGTTGCCACCTACGCGCTCAGGAAGCTGGCAGCGCGCGGCTACGTGGCGGGCGAGAAGTCGGG
CAAGGAGGTGCTGTTCTCGGTCACGCCCGAGGGGCGCGTGCTGTGCGAGAAGTACCGCGAGGTGCGCGAGCACTGCCTGA
TCGAGACGCTCAGGGACAGCGGGCTCACCAACGCGCAGATCGGCGAGGCCGCGCAGCTGCTGCGCCACGCCTCGGGGCTG
TACGACACGGCCGCGCGCGCGGCCGCCTCGCTGTAG

Upstream 100 bases:

>100_bases
AAATCGCCGACAAGCATATCCCCGCAAGTCGGTGGGTTTGCGGTTCTGGCGTACACTGCGGCTCATTTCTTTCCGAACCG
CTTCTCCCGACGTACCCGAC

Downstream 100 bases:

>100_bases
GCGCGCGGCCGGCCGCGCCGGGGCCGCCTCAGGCCGTCGAGCCCGAGCGGTAGGCGTGGCGCTCGGTGACGATCCAGTCG
AGCGGCCGGTCGTGCGATTC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcription Regulator; MarR Family Regulatory Helix-Turn-Helix Protein; Transcription Regulator MarR-Type HTH Domain

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MPPRPATKIVSSEHLVSETSAELSELEYGLITASNAFNRWMVRCMAAAGAKDMTAIEVSLLHYVGHRDRKKKLADICFVL
NIEDTHVATYALRKLAARGYVAGEKSGKEVLFSVTPEGRVLCEKYREVREHCLIETLRDSGLTNAQIGEAAQLLRHASGL
YDTAARAAASL

Sequences:

>Translated_171_residues
MPPRPATKIVSSEHLVSETSAELSELEYGLITASNAFNRWMVRCMAAAGAKDMTAIEVSLLHYVGHRDRKKKLADICFVL
NIEDTHVATYALRKLAARGYVAGEKSGKEVLFSVTPEGRVLCEKYREVREHCLIETLRDSGLTNAQIGEAAQLLRHASGL
YDTAARAAASL
>Mature_170_residues
PPRPATKIVSSEHLVSETSAELSELEYGLITASNAFNRWMVRCMAAAGAKDMTAIEVSLLHYVGHRDRKKKLADICFVLN
IEDTHVATYALRKLAARGYVAGEKSGKEVLFSVTPEGRVLCEKYREVREHCLIETLRDSGLTNAQIGEAAQLLRHASGLY
DTAARAAASL

Specific function: Unknown

COG id: COG5631

COG function: function code K; Predicted transcription regulator, contains HTH domain (MarR family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18762; Mature: 18631

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPRPATKIVSSEHLVSETSAELSELEYGLITASNAFNRWMVRCMAAAGAKDMTAIEVSL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCCCCCHHHHHHHH
LHYVGHRDRKKKLADICFVLNIEDTHVATYALRKLAARGYVAGEKSGKEVLFSVTPEGRV
HHHHCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHH
LCEKYREVREHCLIETLRDSGLTNAQIGEAAQLLRHASGLYDTAARAAASL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure 
PPRPATKIVSSEHLVSETSAELSELEYGLITASNAFNRWMVRCMAAAGAKDMTAIEVSL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCCCCCHHHHHHHH
LHYVGHRDRKKKLADICFVLNIEDTHVATYALRKLAARGYVAGEKSGKEVLFSVTPEGRV
HHHHCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHH
LCEKYREVREHCLIETLRDSGLTNAQIGEAAQLLRHASGLYDTAARAAASL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA