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The map label for this gene is ybgL [C]

Identifier: 238028864

GI number: 238028864

Start: 3786860

End: 3787612

Strand: Direct

Name: ybgL [C]

Synonym: bglu_1g33290

Alternate gene names: 238028864

Gene position: 3786860-3787612 (Clockwise)

Preceding gene: 238028863

Following gene: 238028874

Centisome position: 96.94

GC content: 73.97

Gene sequence:

>753_bases
ATGCAAATCGACCTGAACGCCGATCTCGGCGAGGGCTGCGGCAGCGACGAGGCGCTGCTCGGGCTCGTCACCTCGGCGAA
CATCGCGTGCGGCTGGCACGCGGGCGGCGCGCAGGCGATGCGCGACTGCGTGCGCTGGGCGGTGCGCCGCCACGTCTCGA
TCGGCGCCCATCCGAGCTTCCACGATCCCGAGAACTTCGGACGCAAGGAGATGGACCTGCCGGCGGGCGAGATCTACGCC
GGCGTCCTCTATCAACTCGGCGCCCTATCTGCGATCGCACAAGCCGAGGGCGGCCGCATCGCCCATGTCAAGCCGCACGG
CGCGCTCTACAACCAGGCCGCGCGCGATGCGCGCATCGCCGATGCGGTGGTGGCCGCGATCCACGATTTCGATCCGTCGG
TGGCCGTGTACGGGCTGGCCGGCAGCGGCTTCGTGGCGGCCGCGCGGCGCGCCGGCCTGGCGGCCGTCGAGGAGGTGTTC
GCCGATCGCGGCTATCGCGCCGACGGCTCGCTGGTGCCGCGCGGCGAACCGGGCGCGCTGGTGGACGACGAGGCGGCGAT
GCTGGCGCGCACGCTGGAAATGGTGCGCGGCCGGCGCGTGCGCGCGGTGACGGGCGAGTGGGTGCCGCTCAATGCGCAGA
CCGTCTGCCTGCACGGCGACGGCCCGCACGCGCTGGCGTTCGCGCGGCGGCTGCGCGACACGCTCGGGCAGGCCGGCGTC
ACGCTGGTCGCGCCGGGCGCGACGCACGCCTGA

Upstream 100 bases:

>100_bases
TACCTGCGGCAGATCGACGTGGCGATCGCGCTGCGCGACGAGACGCTTTCCCGGGCCGCCTGACGGCCCGCCCCCTCACG
ACCCAGGACCCGCACACATC

Downstream 100 bases:

>100_bases
ACCGCCGCGACCGAAGCGGGCCGCGCCGGATCGGCACCGCATCGGCAATGCGCCGCGCCGATGCGGTGCCGCCAGACGGC
CGGTTAATGGCGCACGATCA

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MQIDLNADLGEGCGSDEALLGLVTSANIACGWHAGGAQAMRDCVRWAVRRHVSIGAHPSFHDPENFGRKEMDLPAGEIYA
GVLYQLGALSAIAQAEGGRIAHVKPHGALYNQAARDARIADAVVAAIHDFDPSVAVYGLAGSGFVAAARRAGLAAVEEVF
ADRGYRADGSLVPRGEPGALVDDEAAMLARTLEMVRGRRVRAVTGEWVPLNAQTVCLHGDGPHALAFARRLRDTLGQAGV
TLVAPGATHA

Sequences:

>Translated_250_residues
MQIDLNADLGEGCGSDEALLGLVTSANIACGWHAGGAQAMRDCVRWAVRRHVSIGAHPSFHDPENFGRKEMDLPAGEIYA
GVLYQLGALSAIAQAEGGRIAHVKPHGALYNQAARDARIADAVVAAIHDFDPSVAVYGLAGSGFVAAARRAGLAAVEEVF
ADRGYRADGSLVPRGEPGALVDDEAAMLARTLEMVRGRRVRAVTGEWVPLNAQTVCLHGDGPHALAFARRLRDTLGQAGV
TLVAPGATHA
>Mature_250_residues
MQIDLNADLGEGCGSDEALLGLVTSANIACGWHAGGAQAMRDCVRWAVRRHVSIGAHPSFHDPENFGRKEMDLPAGEIYA
GVLYQLGALSAIAQAEGGRIAHVKPHGALYNQAARDARIADAVVAAIHDFDPSVAVYGLAGSGFVAAARRAGLAAVEEVF
ADRGYRADGSLVPRGEPGALVDDEAAMLARTLEMVRGRRVRAVTGEWVPLNAQTVCLHGDGPHALAFARRLRDTLGQAGV
TLVAPGATHA

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=244, Percent_Identity=60.655737704918, Blast_Score=308, Evalue=1e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 26114; Mature: 26114

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIDLNADLGEGCGSDEALLGLVTSANIACGWHAGGAQAMRDCVRWAVRRHVSIGAHPSF
CEEECCCCCCCCCCCCHHHEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCC
HDPENFGRKEMDLPAGEIYAGVLYQLGALSAIAQAEGGRIAHVKPHGALYNQAARDARIA
CCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH
DAVVAAIHDFDPSVAVYGLAGSGFVAAARRAGLAAVEEVFADRGYRADGSLVPRGEPGAL
HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
VDDEAAMLARTLEMVRGRRVRAVTGEWVPLNAQTVCLHGDGPHALAFARRLRDTLGQAGV
ECHHHHHHHHHHHHHCCCEEEEECCCEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCE
TLVAPGATHA
EEECCCCCCC
>Mature Secondary Structure
MQIDLNADLGEGCGSDEALLGLVTSANIACGWHAGGAQAMRDCVRWAVRRHVSIGAHPSF
CEEECCCCCCCCCCCCHHHEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCC
HDPENFGRKEMDLPAGEIYAGVLYQLGALSAIAQAEGGRIAHVKPHGALYNQAARDARIA
CCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH
DAVVAAIHDFDPSVAVYGLAGSGFVAAARRAGLAAVEEVFADRGYRADGSLVPRGEPGAL
HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
VDDEAAMLARTLEMVRGRRVRAVTGEWVPLNAQTVCLHGDGPHALAFARRLRDTLGQAGV
ECHHHHHHHHHHHHHCCCEEEEECCCEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCE
TLVAPGATHA
EEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA