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The map label for this gene is ybjT [C]

Identifier: 238028858

GI number: 238028858

Start: 3780739

End: 3781698

Strand: Reverse

Name: ybjT [C]

Synonym: bglu_1g33230

Alternate gene names: 238028858

Gene position: 3781698-3780739 (Counterclockwise)

Preceding gene: 238028859

Following gene: 238028857

Centisome position: 96.81

GC content: 76.15

Gene sequence:

>960_bases
ATGGATCGTCCGACCATCGCGCTCGTCGGCGCCACCGGCTTCATCGGCGCGCGCCTCGTCGCGGCCCTGGTGCGCGCCGG
CTATCCGGTGCGCGTCGCCGCGCGGCGCCGCGAGCGCGCCCGCCATCTCGCCACCATGCCGGTGGAGGTGGTCGAACTCG
AGGGCCTCGACGCCGGCTCGCTCACGCGCGTGGTGGCCGGCGCCGGCGTCGCGATCAATCTGGTCGGCACGCTGCACGGC
GGCCACGGCACGCCCTACGGCGAGGGCTTCCGGCAATTGCACGTGGCGCTGCCGGGCGCGCTGGCCGCAGCCTGCGCCGG
CGCGGGCGTGGCGCAGCTGGTGCAGGTCAGCGCGCTCGGCGCCGATTCGCAGGGGCCGAGCATGTACCAGCGCTCGAAGG
GCGACGGCGAGGCCGCGCTGCACGCGGCGGCGGCCGCCTCGGGCGGGGCGCTCGCCGTCACCGTGCTGCGGCCGTCGGTG
GTGTTCGGCCCCGGCGACGCATTCCTGACCACCTTCGCCCGGCTGCAGCGGCTGCTGCCGGTGCTGCCGCTCGCGATGCC
CGACGCGCAGTTCCAGCCGGTATACGTCGGCGACGTCGCGCAGGCGCTGCTGGCCGTGGCCGGCAACCGCGCGGCCTACG
GGCGGACCTACGAGCTGGGCGGCCCGCGCGTCTACACGCTCGAGCAGCTGGTGCGCTACTGCGGCGCGCTGGTGGGCCGC
CAGGCGCGCATCATCCGGCTGCCCGACGCGCTCGCGCGGCTGCAGGCATGCGTGTTCGAGCATCTGCCCGGCGAGCCCGT
GATCACGCGCGACAATCTCGACTCGATGCGCGTGCCGAACGTGCTGAGCGGCCCGCTCGCGCCCGAACTCGGGGTGCGGC
CCGCGAGCCTCGAAAGCGTCGCGCCCGGCTATCTCGCCGCCGGCGGCACGCGCTACGACGCCTGGCGCTCGCGGCGCTGA

Upstream 100 bases:

>100_bases
CGGCGGCCCGCGCCGGGCCGCCCGGTGCCGCGCCCGATGCCCTTGCGCTGCGCGCGGCCCGGCCGGCGGCGCGTTTTCGA
CACCTGACGGGAGTTTCGCC

Downstream 100 bases:

>100_bases
CGACAGCCGCCGCGACGGCCTAGCCGCGCTGCTTGCCGGGCGGGCCGAGTCGGCTCGCCCCGCGGTGCGGGCACCCGCGC
CGGGCGCACCCGTCGCGCGG

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NADH Dehydrogenase; NADH-Ubiquinone Oxidoreductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerase; NADH-Ubiquinone Oxidoreductase Subunit; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Oxidoreductase; NADH-Ubiquinone Oxireductase; NADH Dehydrogenase/Oxidoreductase-Like Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta-Hydroxy-Delta(5)-Steroid Dehydrogenase; NADH Ubiquinone Oxidoreductase; NADH Dehydrogenase 1 Alpha Subcomplex; Dehydrogenase; NADH Dehydrogenase/NADH Dehydrogenase Protein; Ubiquinone Dependent NADH Dehydrogenase; NADH Dehydrogenase Subunit; Homolog NADH Dehydrogenase; NADH-Ubiquinone Oxidoreductase Family Protein; NAD Dependent Epimerase; Nucleoside-Diphosphate Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family; NADH-Ubiquinone Oxidoreductase -Like Protein; NADH-Ubiquinone Oxidoreductase Putativ; NADH-Quinone Oxidoreductase

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MDRPTIALVGATGFIGARLVAALVRAGYPVRVAARRRERARHLATMPVEVVELEGLDAGSLTRVVAGAGVAINLVGTLHG
GHGTPYGEGFRQLHVALPGALAAACAGAGVAQLVQVSALGADSQGPSMYQRSKGDGEAALHAAAAASGGALAVTVLRPSV
VFGPGDAFLTTFARLQRLLPVLPLAMPDAQFQPVYVGDVAQALLAVAGNRAAYGRTYELGGPRVYTLEQLVRYCGALVGR
QARIIRLPDALARLQACVFEHLPGEPVITRDNLDSMRVPNVLSGPLAPELGVRPASLESVAPGYLAAGGTRYDAWRSRR

Sequences:

>Translated_319_residues
MDRPTIALVGATGFIGARLVAALVRAGYPVRVAARRRERARHLATMPVEVVELEGLDAGSLTRVVAGAGVAINLVGTLHG
GHGTPYGEGFRQLHVALPGALAAACAGAGVAQLVQVSALGADSQGPSMYQRSKGDGEAALHAAAAASGGALAVTVLRPSV
VFGPGDAFLTTFARLQRLLPVLPLAMPDAQFQPVYVGDVAQALLAVAGNRAAYGRTYELGGPRVYTLEQLVRYCGALVGR
QARIIRLPDALARLQACVFEHLPGEPVITRDNLDSMRVPNVLSGPLAPELGVRPASLESVAPGYLAAGGTRYDAWRSRR
>Mature_319_residues
MDRPTIALVGATGFIGARLVAALVRAGYPVRVAARRRERARHLATMPVEVVELEGLDAGSLTRVVAGAGVAINLVGTLHG
GHGTPYGEGFRQLHVALPGALAAACAGAGVAQLVQVSALGADSQGPSMYQRSKGDGEAALHAAAAASGGALAVTVLRPSV
VFGPGDAFLTTFARLQRLLPVLPLAMPDAQFQPVYVGDVAQALLAVAGNRAAYGRTYELGGPRVYTLEQLVRYCGALVGR
QARIIRLPDALARLQACVFEHLPGEPVITRDNLDSMRVPNVLSGPLAPELGVRPASLESVAPGYLAAGGTRYDAWRSRR

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=302, Percent_Identity=31.7880794701987, Blast_Score=125, Evalue=6e-29,
Organism=Caenorhabditis elegans, GI17556106, Length=268, Percent_Identity=27.9850746268657, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24667554, Length=331, Percent_Identity=27.190332326284, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33146; Mature: 33146

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRPTIALVGATGFIGARLVAALVRAGYPVRVAARRRERARHLATMPVEVVELEGLDAGS
CCCCCEEEEECCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCEEEEEECCCCCCH
LTRVVAGAGVAINLVGTLHGGHGTPYGEGFRQLHVALPGALAAACAGAGVAQLVQVSALG
HHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCC
ADSQGPSMYQRSKGDGEAALHAAAAASGGALAVTVLRPSVVFGPGDAFLTTFARLQRLLP
CCCCCCHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCEEEECCCHHHHHHHHHHHHHHH
VLPLAMPDAQFQPVYVGDVAQALLAVAGNRAAYGRTYELGGPRVYTLEQLVRYCGALVGR
HHCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCEEEECCCCEEHHHHHHHHHHHHHHCC
QARIIRLPDALARLQACVFEHLPGEPVITRDNLDSMRVPNVLSGPLAPELGVRPASLESV
CCEEEECHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHCCCCCCCCCCCCCCHHHC
APGYLAAGGTRYDAWRSRR
CCCHHCCCCCCHHHHCCCC
>Mature Secondary Structure
MDRPTIALVGATGFIGARLVAALVRAGYPVRVAARRRERARHLATMPVEVVELEGLDAGS
CCCCCEEEEECCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCEEEEEECCCCCCH
LTRVVAGAGVAINLVGTLHGGHGTPYGEGFRQLHVALPGALAAACAGAGVAQLVQVSALG
HHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCC
ADSQGPSMYQRSKGDGEAALHAAAAASGGALAVTVLRPSVVFGPGDAFLTTFARLQRLLP
CCCCCCHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCEEEECCCHHHHHHHHHHHHHHH
VLPLAMPDAQFQPVYVGDVAQALLAVAGNRAAYGRTYELGGPRVYTLEQLVRYCGALVGR
HHCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCEEEECCCCEEHHHHHHHHHHHHHHCC
QARIIRLPDALARLQACVFEHLPGEPVITRDNLDSMRVPNVLSGPLAPELGVRPASLESV
CCEEEECHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHCCCCCCCCCCCCCCHHHC
APGYLAAGGTRYDAWRSRR
CCCHHCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA