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The map label for this gene is flgF [H]

Identifier: 238028848

GI number: 238028848

Start: 3771906

End: 3772658

Strand: Reverse

Name: flgF [H]

Synonym: bglu_1g33130

Alternate gene names: 238028848

Gene position: 3772658-3771906 (Counterclockwise)

Preceding gene: 238028849

Following gene: 238028847

Centisome position: 96.57

GC content: 68.26

Gene sequence:

>753_bases
ATGGACCGACTGATCTATACGGCAATGACGGGCGCGGATCAGGCGCTCGACCAGCAGTCCGTGATCGCGAACAATCTCGC
GAACACGTCGACGACCGGTTTTCGCGCGCAGCTCGCGACCTACCGCGCGGTGCCGATGAATTTCGGCGAGGCCAGCAACC
CCGACACCACCCGCACCTTCGTGCTGAGCTCGACGCCCGGCGCCGACTATTCGGCCGGCCCGATCGCGCGCACCGGCAAC
CCGCTCGACGTGGCGGTGCAGGGCAAGGGCTGGCTCACCGTGCTCGCGCCCGACGGCAGCGAGGGCTACACGCGCGCCGG
CAACCTGCACGTGGACGAGAACGGCCAGCTGGTGAACGCCTCGAACCTGCCGGTGGTGGGCACCGGCGGCCCGATCTCGG
TGCCGCCGAACGGGCAGGTGACGATCGGCTCCGACGGCACCGTGTCGGTGCTCGCCGCGGGCGATCCGCCCTCGGCGATC
GCGATGGTCGACCAGCTCAAGCTCGTCAATCCGGAGCCGGCCAGCATGAAGCGCGGCGACGACGGCCTGTTCCGCACCAC
CGACGGCAATCCCGCCGAGGTGGACCCGAGCGTCGTGCTCGCGCCCAGCTCGCTCGAGGGCAGCAACGTGAATCCGGTCA
GCGCGATGGTGTCGATGCTCGACAACGCGCGCGCCTTTCAGCTGCATACCAAGCTGATCGAAACCGCCGACCAGAACGAG
CAGAACGCAAACCAGATCCTCAGCTTCAGCTGA

Upstream 100 bases:

>100_bases
AACTACCAGGCCAACGCGCAGACCATCAAGACCCAGCAGACCGTCGACCAGACGCTGCTCAACCTGTAACGCGCGGCGCG
CGAAACCGGAACCAACGACC

Downstream 100 bases:

>100_bases
GCCGGTCATCGAATCCGCAGGAGAAACCCCAGTGAACCGATCTCTCTACATCGCCGCGACCGGCATGAATGCGCAGCAGG
CGCAGATGGACGTGATCTCG

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MDRLIYTAMTGADQALDQQSVIANNLANTSTTGFRAQLATYRAVPMNFGEASNPDTTRTFVLSSTPGADYSAGPIARTGN
PLDVAVQGKGWLTVLAPDGSEGYTRAGNLHVDENGQLVNASNLPVVGTGGPISVPPNGQVTIGSDGTVSVLAAGDPPSAI
AMVDQLKLVNPEPASMKRGDDGLFRTTDGNPAEVDPSVVLAPSSLEGSNVNPVSAMVSMLDNARAFQLHTKLIETADQNE
QNANQILSFS

Sequences:

>Translated_250_residues
MDRLIYTAMTGADQALDQQSVIANNLANTSTTGFRAQLATYRAVPMNFGEASNPDTTRTFVLSSTPGADYSAGPIARTGN
PLDVAVQGKGWLTVLAPDGSEGYTRAGNLHVDENGQLVNASNLPVVGTGGPISVPPNGQVTIGSDGTVSVLAAGDPPSAI
AMVDQLKLVNPEPASMKRGDDGLFRTTDGNPAEVDPSVVLAPSSLEGSNVNPVSAMVSMLDNARAFQLHTKLIETADQNE
QNANQILSFS
>Mature_250_residues
MDRLIYTAMTGADQALDQQSVIANNLANTSTTGFRAQLATYRAVPMNFGEASNPDTTRTFVLSSTPGADYSAGPIARTGN
PLDVAVQGKGWLTVLAPDGSEGYTRAGNLHVDENGQLVNASNLPVVGTGGPISVPPNGQVTIGSDGTVSVLAAGDPPSAI
AMVDQLKLVNPEPASMKRGDDGLFRTTDGNPAEVDPSVVLAPSSLEGSNVNPVSAMVSMLDNARAFQLHTKLIETADQNE
QNANQILSFS

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=256, Percent_Identity=49.609375, Blast_Score=224, Evalue=6e-60,
Organism=Escherichia coli, GI1787318, Length=261, Percent_Identity=34.4827586206897, Blast_Score=115, Evalue=3e-27,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 25910; Mature: 25910

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLIYTAMTGADQALDQQSVIANNLANTSTTGFRAQLATYRAVPMNFGEASNPDTTRTF
CCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEE
VLSSTPGADYSAGPIARTGNPLDVAVQGKGWLTVLAPDGSEGYTRAGNLHVDENGQLVNA
EEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCEECCCEEECCCCCEEEC
SNLPVVGTGGPISVPPNGQVTIGSDGTVSVLAAGDPPSAIAMVDQLKLVNPEPASMKRGD
CCCCEEECCCCEECCCCCCEEECCCCCEEEEECCCCCHHHHEEHHEEECCCCCCCCCCCC
DGLFRTTDGNPAEVDPSVVLAPSSLEGSNVNPVSAMVSMLDNARAFQLHTKLIETADQNE
CCEEECCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHCCCCC
QNANQILSFS
CCCCCEEECC
>Mature Secondary Structure
MDRLIYTAMTGADQALDQQSVIANNLANTSTTGFRAQLATYRAVPMNFGEASNPDTTRTF
CCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEE
VLSSTPGADYSAGPIARTGNPLDVAVQGKGWLTVLAPDGSEGYTRAGNLHVDENGQLVNA
EEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCEECCCEEECCCCCEEEC
SNLPVVGTGGPISVPPNGQVTIGSDGTVSVLAAGDPPSAIAMVDQLKLVNPEPASMKRGD
CCCCEEECCCCEECCCCCCEEECCCCCEEEEECCCCCHHHHEEHHEEECCCCCCCCCCCC
DGLFRTTDGNPAEVDPSVVLAPSSLEGSNVNPVSAMVSMLDNARAFQLHTKLIETADQNE
CCEEECCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHCCCCC
QNANQILSFS
CCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2129540; 11677609; 2193164; 2181149 [H]