| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is flgG [H]
Identifier: 238028847
GI number: 238028847
Start: 3771086
End: 3771874
Strand: Reverse
Name: flgG [H]
Synonym: bglu_1g33120
Alternate gene names: 238028847
Gene position: 3771874-3771086 (Counterclockwise)
Preceding gene: 238028848
Following gene: 238028846
Centisome position: 96.55
GC content: 66.29
Gene sequence:
>789_bases GTGAACCGATCTCTCTACATCGCCGCGACCGGCATGAATGCGCAGCAGGCGCAGATGGACGTGATCTCGAACAACCTCGC GAACGTGAGCACCAATGGCTTCAAGGGCTCGCGCGCCGTGTTCGAGGACCTGCTGTACCAGACGGTGCGCCAGCCGGGCG CGAACTCGACGCAGCAAACCGAGCTGCCCTCGGGCCTGCAGCTCGGCACCGGCGTGCAGCAGGTCGCCACCGAGCGGCTC TACACGCAGGGCAACCTGCAGCAGACCGGCAACTCGCGCGACGTCGCGATCAACGGCCAGGGCTTCTTCCAGGTGCTGAT GCCGGACGGCACCACCGCCTACACGCGCGACGGCTCGTTCCAGGCCAACAACCAGGGCCAGCTCGTCACCTCGGCGGGCT ACCAGGTGCTGCCGGCCATCACCGTGCCGCAGAACGCGCAGTCGCTGACGATCGGCGCCGACGGCGTGGTGACGGTCACC CAGCCGGGCTCGACCAACGCGGTGCAGATCGGCTCGATGCAGCTGGCCACCTTCATCAACCCGGAAGGGCTCAACGCGCT CGGCCAGAACCTGTTCGCGGAAACCACCTCGTCGGGCGCGCCGAACGTGACGACGCCGGGCCTGAACGGCGCGGGCTCGC TGAATCAGGGCTACGTCGAGTCGTCGAACGTGAACGTGGTGCAGGAACTGGTCAACATGATCCAGACCCAGCGCGCCTAC GAGATCAACAGCAAGGCCGTGACCACGTCCGACCAGATGCTGCAGACCGTCACGCAGATGAAGAGCTAA
Upstream 100 bases:
>100_bases CATACCAAGCTGATCGAAACCGCCGACCAGAACGAGCAGAACGCAAACCAGATCCTCAGCTTCAGCTGAGCCGGTCATCG AATCCGCAGGAGAAACCCCA
Downstream 100 bases:
>100_bases CGGACCGATCGGCACAACGTCATGAAGCAGGTTCGCCTTTCCCGATTCGCGGTGCTGGCTGCCGCGGCCGCCCTCGCCGG CTGCGCGCAGATACCGCGTC
Product: flagellar basal body rod protein FlgG
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQTELPSGLQLGTGVQQVATERL YTQGNLQQTGNSRDVAINGQGFFQVLMPDGTTAYTRDGSFQANNQGQLVTSAGYQVLPAITVPQNAQSLTIGADGVVTVT QPGSTNAVQIGSMQLATFINPEGLNALGQNLFAETTSSGAPNVTTPGLNGAGSLNQGYVESSNVNVVQELVNMIQTQRAY EINSKAVTTSDQMLQTVTQMKS
Sequences:
>Translated_262_residues MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQTELPSGLQLGTGVQQVATERL YTQGNLQQTGNSRDVAINGQGFFQVLMPDGTTAYTRDGSFQANNQGQLVTSAGYQVLPAITVPQNAQSLTIGADGVVTVT QPGSTNAVQIGSMQLATFINPEGLNALGQNLFAETTSSGAPNVTTPGLNGAGSLNQGYVESSNVNVVQELVNMIQTQRAY EINSKAVTTSDQMLQTVTQMKS >Mature_262_residues MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQTELPSGLQLGTGVQQVATERL YTQGNLQQTGNSRDVAINGQGFFQVLMPDGTTAYTRDGSFQANNQGQLVTSAGYQVLPAITVPQNAQSLTIGADGVVTVT QPGSTNAVQIGSMQLATFINPEGLNALGQNLFAETTSSGAPNVTTPGLNGAGSLNQGYVESSNVNVVQELVNMIQTQRAY EINSKAVTTSDQMLQTVTQMKS
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=260, Percent_Identity=70.7692307692308, Blast_Score=376, Evalue=1e-106, Organism=Escherichia coli, GI1787317, Length=264, Percent_Identity=29.1666666666667, Blast_Score=77, Evalue=8e-16, Organism=Escherichia coli, GI1787316, Length=92, Percent_Identity=41.304347826087, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 - InterPro: IPR012834 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 27635; Mature: 27635
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQT CCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC ELPSGLQLGTGVQQVATERLYTQGNLQQTGNSRDVAINGQGFFQVLMPDGTTAYTRDGSF CCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCEEEECCCCEEEEEECCCCEEEECCCCE QANNQGQLVTSAGYQVLPAITVPQNAQSLTIGADGVVTVTQPGSTNAVQIGSMQLATFIN EECCCCCEEECCCCEEEEEEECCCCCCEEEECCCCEEEEECCCCCCEEEECCEEEEEEEC PEGLNALGQNLFAETTSSGAPNVTTPGLNGAGSLNQGYVESSNVNVVQELVNMIQTQRAY CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHE EINSKAVTTSDQMLQTVTQMKS ECCCCEEECHHHHHHHHHHHCC >Mature Secondary Structure MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQT CCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC ELPSGLQLGTGVQQVATERLYTQGNLQQTGNSRDVAINGQGFFQVLMPDGTTAYTRDGSF CCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCEEEECCCCEEEEEECCCCEEEECCCCE QANNQGQLVTSAGYQVLPAITVPQNAQSLTIGADGVVTVTQPGSTNAVQIGSMQLATFIN EECCCCCEEECCCCEEEEEEECCCCCCEEEECCCCEEEEECCCCCCEEEECCEEEEEEEC PEGLNALGQNLFAETTSSGAPNVTTPGLNGAGSLNQGYVESSNVNVVQELVNMIQTQRAY CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHE EINSKAVTTSDQMLQTVTQMKS ECCCCEEECHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]