| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is flgK [H]
Identifier: 238028842
GI number: 238028842
Start: 3765080
End: 3767074
Strand: Reverse
Name: flgK [H]
Synonym: bglu_1g33070
Alternate gene names: 238028842
Gene position: 3767074-3765080 (Counterclockwise)
Preceding gene: 238028843
Following gene: 238028841
Centisome position: 96.43
GC content: 68.47
Gene sequence:
>1995_bases ATGAGCAACCTTCTGAACCTCGGACTCAGCGGCCTGAACGCTGCGCAGTGGGGCATCAACACGACCGGCCAGAACATCAG CAATCAGGCCACGCCCGGTTACTCGGTCGAGCGCGTGGTGTATGCCGAATCCGATGGCCAATACACCCCGAACGGCTTCC TGCCGTCCGGCGTCACCACCGTCACGGTGCAGCGCCAGTACAGCCAGTACCTGTCCGACCAGCTCAACACGGCGCAGGCC GCCAGCAGCTCGCTGAGCACCTATTCGCAGATGGTCGCGACGCTGAACAACTACATCGGCAGCCCGACGGGCGGCATCGC CTCGGCGATCTCGAGCTACTTCAGCGGCCTGCAGAACGTGAGCGCCAGCGCGTCGAGCGCGGCCTCGCGCGCGACCGCGA TCAGCAACGCCGCGACGCTCGCCAACCAGCTGACCTCGGCCGGCTCGGAATTCGACGCGCTGCGCCAGAGCGTCAACACG CAGCTGCAGAGCTCGGTCACGCAAGTCAACTCGCTGACCACGCAGATCGCCCAGCTGAACCAGCAGATCACGGTGGCGAG CCAGGGCGGCCAGCCGCCGAACCAGCTGCTCGACCAGCGCGACCATGCGCTGGCGACGCTGCAGACCGTCGTCGGCGTGC AGGTGGTGCAGAGCAACGGCAACTACAACGTGCAGATGGCCAACGGCCAGCCGCTGGTGGTGGGCAACACCAGCTACACG ATGTCGGCGGTGCCCTCGCCGTCGGACCCGAGCGAGCTGACCCTCGGCCTGCAGAACACCGCGGCCGGCTCGGGCGCGGC CGGCCAGATGCAGGTGCTGACCGGCAGCAACATCACCGGCGGCACGATCGGCGGCCTGATTCAGTTCCGCAGCCAGACGC TCGATCCGGCCGAGGCGAAGCTCGGCGCGATCGCGGTCAGCTTCGCCTCGCAGGTGAACGCGCAGAACGCGCTCGGCATC GACGCGAACGGCAACGTGGGCGGCGACCTGTTCAGCGTGGCCACCCCGCAGACCATCGCCAACACCAACAACACCGGCGA CGCCACCATCACGGCGAGCTTCGCCAACGGCCAGCAGCCGCCGACGAGCGACTACACGCTGTCCTACGACGGCACCAGCT ACACGCTGAAGGACCGCTACTCGGGCGGCGTGATCGGCACGGCCACCTCGCTGCCGGCCACCCTGGGCGGCCTCAAGCTG TCGGTCGACGACGCCACCAAGCTGAAGGCGGGCGATTCGTTCACGCTCGAGCCCACCCGCAGCGCGCTCAACGGCTTCGC CTCGGTCGGCACGCCCTCGACGATCGCGGCCGCCTCGCCGGTGCTGGCCACGGTCGGCACCAGCAACGCCGGCTCGGCCG CCATCACGCCGGGCACGGTCACGGCCGGCTACCAGATGCCGTCGACCACCACGACGCTGACCTACAACGCCGCCTCGAAG TCGCTGACGGGCTTCCCGGCCGGCACCACGGTGACCGTCAACACCACGCCGCCGAGCTCGTACCCGATCACGGGCAGCAC CACCCAGGTGCCCTACGACTCGACCGCGGGCGCCTCGCTGACGATCACCAGCACGGTCCAGCCGCCGCCCTCGGGCGTGA TGAACAACGTGTCGATGCAGATCACCGGCAGCCCCGTCGACGGCGACACCTTCACGATCGCCCGGGGCGGCGCGAGCAAC GACGGCCGCAACGCGCAGGCCCTGTCGAACCTCGTCCGTTCGAAGGTCTTCGACGGCGGCACCTCGACGCTGACCACCGC CTACGGCTCCTACGTGAACGGCGTCGGCAACACCGCCGCGCAGCTCAGCGCGGCGAGCACCGCCCAGACCGCCCTCGTCA GCCAGATCACGCAGCAGCAGCAGTCGGTGTCGGGCGTGAACCAGGACGAGGAAGCAGTAAACCTGATGCAGTACCAGCAG ATGTACCAGGCGAACGCGAAGGTGATCCAGACCGCCTCGACGCTGTTCAGCACGCTGCTCGGCATCTTCAACTGA
Upstream 100 bases:
>100_bases CGGCCGCCGCGATTTTTGCCGCGCGCGGCCTCAATTTCCACCGGACGCCGCCGTTATACCGGGTGTCCCTTTCCCGGAGG CCGTTCGCGGCCGGCATCCC
Downstream 100 bases:
>100_bases CGACGGAATCGATCATCATGCGCATCTCGACCTCGCAGTTCTATACCCAGAACATCGAGCTGATGAACAATCAGCAGTCG CAGCTCTCGGAGCTCTATCA
Product: flagellar hook-associated protein FlgK
Products: NA
Alternate protein names: HAP1 [H]
Number of amino acids: Translated: 664; Mature: 663
Protein sequence:
>664_residues MSNLLNLGLSGLNAAQWGINTTGQNISNQATPGYSVERVVYAESDGQYTPNGFLPSGVTTVTVQRQYSQYLSDQLNTAQA ASSSLSTYSQMVATLNNYIGSPTGGIASAISSYFSGLQNVSASASSAASRATAISNAATLANQLTSAGSEFDALRQSVNT QLQSSVTQVNSLTTQIAQLNQQITVASQGGQPPNQLLDQRDHALATLQTVVGVQVVQSNGNYNVQMANGQPLVVGNTSYT MSAVPSPSDPSELTLGLQNTAAGSGAAGQMQVLTGSNITGGTIGGLIQFRSQTLDPAEAKLGAIAVSFASQVNAQNALGI DANGNVGGDLFSVATPQTIANTNNTGDATITASFANGQQPPTSDYTLSYDGTSYTLKDRYSGGVIGTATSLPATLGGLKL SVDDATKLKAGDSFTLEPTRSALNGFASVGTPSTIAAASPVLATVGTSNAGSAAITPGTVTAGYQMPSTTTTLTYNAASK SLTGFPAGTTVTVNTTPPSSYPITGSTTQVPYDSTAGASLTITSTVQPPPSGVMNNVSMQITGSPVDGDTFTIARGGASN DGRNAQALSNLVRSKVFDGGTSTLTTAYGSYVNGVGNTAAQLSAASTAQTALVSQITQQQQSVSGVNQDEEAVNLMQYQQ MYQANAKVIQTASTLFSTLLGIFN
Sequences:
>Translated_664_residues MSNLLNLGLSGLNAAQWGINTTGQNISNQATPGYSVERVVYAESDGQYTPNGFLPSGVTTVTVQRQYSQYLSDQLNTAQA ASSSLSTYSQMVATLNNYIGSPTGGIASAISSYFSGLQNVSASASSAASRATAISNAATLANQLTSAGSEFDALRQSVNT QLQSSVTQVNSLTTQIAQLNQQITVASQGGQPPNQLLDQRDHALATLQTVVGVQVVQSNGNYNVQMANGQPLVVGNTSYT MSAVPSPSDPSELTLGLQNTAAGSGAAGQMQVLTGSNITGGTIGGLIQFRSQTLDPAEAKLGAIAVSFASQVNAQNALGI DANGNVGGDLFSVATPQTIANTNNTGDATITASFANGQQPPTSDYTLSYDGTSYTLKDRYSGGVIGTATSLPATLGGLKL SVDDATKLKAGDSFTLEPTRSALNGFASVGTPSTIAAASPVLATVGTSNAGSAAITPGTVTAGYQMPSTTTTLTYNAASK SLTGFPAGTTVTVNTTPPSSYPITGSTTQVPYDSTAGASLTITSTVQPPPSGVMNNVSMQITGSPVDGDTFTIARGGASN DGRNAQALSNLVRSKVFDGGTSTLTTAYGSYVNGVGNTAAQLSAASTAQTALVSQITQQQQSVSGVNQDEEAVNLMQYQQ MYQANAKVIQTASTLFSTLLGIFN >Mature_663_residues SNLLNLGLSGLNAAQWGINTTGQNISNQATPGYSVERVVYAESDGQYTPNGFLPSGVTTVTVQRQYSQYLSDQLNTAQAA SSSLSTYSQMVATLNNYIGSPTGGIASAISSYFSGLQNVSASASSAASRATAISNAATLANQLTSAGSEFDALRQSVNTQ LQSSVTQVNSLTTQIAQLNQQITVASQGGQPPNQLLDQRDHALATLQTVVGVQVVQSNGNYNVQMANGQPLVVGNTSYTM SAVPSPSDPSELTLGLQNTAAGSGAAGQMQVLTGSNITGGTIGGLIQFRSQTLDPAEAKLGAIAVSFASQVNAQNALGID ANGNVGGDLFSVATPQTIANTNNTGDATITASFANGQQPPTSDYTLSYDGTSYTLKDRYSGGVIGTATSLPATLGGLKLS VDDATKLKAGDSFTLEPTRSALNGFASVGTPSTIAAASPVLATVGTSNAGSAAITPGTVTAGYQMPSTTTTLTYNAASKS LTGFPAGTTVTVNTTPPSSYPITGSTTQVPYDSTAGASLTITSTVQPPPSGVMNNVSMQITGSPVDGDTFTIARGGASND GRNAQALSNLVRSKVFDGGTSTLTTAYGSYVNGVGNTAAQLSAASTAQTALVSQITQQQQSVSGVNQDEEAVNLMQYQQM YQANAKVIQTASTLFSTLLGIFN
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Secreted. Bacterial flagellum (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787323, Length=447, Percent_Identity=34.0044742729307, Blast_Score=233, Evalue=4e-62,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR002371 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 67479; Mature: 67347
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLLNLGLSGLNAAQWGINTTGQNISNQATPGYSVERVVYAESDGQYTPNGFLPSGVTT CCCCHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEE VTVQRQYSQYLSDQLNTAQAASSSLSTYSQMVATLNNYIGSPTGGIASAISSYFSGLQNV EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC SASASSAASRATAISNAATLANQLTSAGSEFDALRQSVNTQLQSSVTQVNSLTTQIAQLN CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QQITVASQGGQPPNQLLDQRDHALATLQTVVGVQVVQSNGNYNVQMANGQPLVVGNTSYT CEEEEEECCCCCHHHHHCCHHHHHHHHHHHHCEEEEECCCCEEEEECCCCEEEECCCCEE MSAVPSPSDPSELTLGLQNTAAGSGAAGQMQVLTGSNITGGTIGGLIQFRSQTLDPAEAK EEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHH LGAIAVSFASQVNAQNALGIDANGNVGGDLFSVATPQTIANTNNTGDATITASFANGQQP HHHHHHHHHHHCCCCCCEECCCCCCCCCCEEECCCCHHHCCCCCCCCEEEEEEECCCCCC PTSDYTLSYDGTSYTLKDRYSGGVIGTATSLPATLGGLKLSVDDATKLKAGDSFTLEPTR CCCCEEEEECCCEEEEEECCCCCEEECCCCCCHHHCCEEEEECCCHHCCCCCCEEECHHH SALNGFASVGTPSTIAAASPVLATVGTSNAGSAAITPGTVTAGYQMPSTTTTLTYNAASK HHHHHHHHCCCCCHHHHCCCEEEEECCCCCCCCEECCCCEECCEECCCCEEEEEEECCCC SLTGFPAGTTVTVNTTPPSSYPITGSTTQVPYDSTAGASLTITSTVQPPPSGVMNNVSMQ CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHCCEEEE ITGSPVDGDTFTIARGGASNDGRNAQALSNLVRSKVFDGGTSTLTTAYGSYVNGVGNTAA EECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHH QLSAASTAQTALVSQITQQQQSVSGVNQDEEAVNLMQYQQMYQANAKVIQTASTLFSTLL HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GIFN HHCC >Mature Secondary Structure SNLLNLGLSGLNAAQWGINTTGQNISNQATPGYSVERVVYAESDGQYTPNGFLPSGVTT CCCHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEE VTVQRQYSQYLSDQLNTAQAASSSLSTYSQMVATLNNYIGSPTGGIASAISSYFSGLQNV EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC SASASSAASRATAISNAATLANQLTSAGSEFDALRQSVNTQLQSSVTQVNSLTTQIAQLN CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QQITVASQGGQPPNQLLDQRDHALATLQTVVGVQVVQSNGNYNVQMANGQPLVVGNTSYT CEEEEEECCCCCHHHHHCCHHHHHHHHHHHHCEEEEECCCCEEEEECCCCEEEECCCCEE MSAVPSPSDPSELTLGLQNTAAGSGAAGQMQVLTGSNITGGTIGGLIQFRSQTLDPAEAK EEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHH LGAIAVSFASQVNAQNALGIDANGNVGGDLFSVATPQTIANTNNTGDATITASFANGQQP HHHHHHHHHHHCCCCCCEECCCCCCCCCCEEECCCCHHHCCCCCCCCEEEEEEECCCCCC PTSDYTLSYDGTSYTLKDRYSGGVIGTATSLPATLGGLKLSVDDATKLKAGDSFTLEPTR CCCCEEEEECCCEEEEEECCCCCEEECCCCCCHHHCCEEEEECCCHHCCCCCCEEECHHH SALNGFASVGTPSTIAAASPVLATVGTSNAGSAAITPGTVTAGYQMPSTTTTLTYNAASK HHHHHHHHCCCCCHHHHCCCEEEEECCCCCCCCEECCCCEECCEECCCCEEEEEEECCCC SLTGFPAGTTVTVNTTPPSSYPITGSTTQVPYDSTAGASLTITSTVQPPPSGVMNNVSMQ CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHCCEEEE ITGSPVDGDTFTIARGGASNDGRNAQALSNLVRSKVFDGGTSTLTTAYGSYVNGVGNTAA EECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHH QLSAASTAQTALVSQITQQQQSVSGVNQDEEAVNLMQYQQMYQANAKVIQTASTLFSTLL HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GIFN HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]