| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028810
Identifier: 238028810
GI number: 238028810
Start: 3725938
End: 3727146
Strand: Reverse
Name: 238028810
Synonym: bglu_1g32740
Alternate gene names: NA
Gene position: 3727146-3725938 (Counterclockwise)
Preceding gene: 238028818
Following gene: 238028809
Centisome position: 95.41
GC content: 74.03
Gene sequence:
>1209_bases ATGAACCCGAAAGCTCACGAACCCGCTAGTTTACCCGTTCCCGGCCCGGACGCGCTCGCCCAGTCCGAAACGCTGGCCGC GTCGCTGCGTGCCGAGATCGCGGCGGCGGGCGGATGGCTGCCGTTCTCGCGCTTCATGGAGCGCGCGCTGTACGCGCCGG GCCTGGGCTACTACAGCGGCGGCGCGCGCAAGTTCGGCCGGCGCGGCGACGACGGCAGCGATTTCGTGACGGCGCCGGAG CTCTCGCCGCTGTTCGCCCACACGCTCGCGCGGCCGGTGGCCGAGGCGCTCGGCGCGAGCGGCACGCGGCGCGTGATGGA GTTCGGCGCCGGCACCGGGCGGCTCGCGGCGGGGCTGCTGGCCGCGCTCGAGGCGCTCGGCGCCGCGCCCGAGCACTACC AGATCGTCGAGCTGTCGGGCGAGCTGCGCGAGCGCCAGCGCGCCACGCTCGCGGCCGCGTTGCCGGCCGCGCTGGCGGCG CGCGTGCAGTGGCTCGACGCGCTGCCCGAGCGCTTTGAGGGCGTGGTGATCGGCAACGAGGTGCTCGACGCGATGCCGGT GCGGCTGGTGCTGCGCGCCGCCGGGGCCGGCGCCGGCTGGCGCGAGCGCGGCGTGGCCGTCGATGCCGCGTCGCGCGCGT TCGTGTTCGAGGACCGGCCGCTCGCGGCGCACGCGCCGGAGCTGATCGACACGCTCGCCGCGCTCGACCTGCCGGCCGGC TACCTGACCGAGACGCACGAGGCCGCGCGCGCCTTCACGCGCACCGTCTGCACGATGCTCGCGCGCGGCGCGGCGTTCTT CATCGACTACGGCTTCCCGGCCGCCGAGTACTACCATCCGCAGCGCGCCGAGGGCACGTTGATGTGCCATTACCGGCACC GCGCGCATGGCGATCCGTTCGTCTGGCCGGGGCTGCAGGACATCACCGCGCACGTCGAGTTCTCGGGGATCCATGCGGCC GGCGTGGCGGCCGGCGCCGAGCTGCTCGGCTATACCTCGCAGGGCCGCTTCCTGCTGAATGCCGGCATCACCGAGGTGCT GGCCGCGATCGATCCGTCCGACCCCGCGCGCTTCCTGCCGGCCGCGAACGCGGTGCAGAAGCTGATTTCCGAAGCGGAGA TGGGCGAGCTGTTCAAGGTGATTGCGTTCGGCCGCGGCATCGATGGCCTTGCCGCCTTCGCGCGCGGCGAACGCTCGCAC GCGCTCTGA
Upstream 100 bases:
>100_bases GCCAGCCGGAATCGGTGCCGCGCCCGTGATCAGCACCACGCGCGCGTCGGGCAGCGCGGCGGCGGACGTTACGGCGGATG CGGTCATTTACAATGCCGGG
Downstream 100 bases:
>100_bases GGCGGAGGAGATCCGATGTTTCGCTGGCTGCTGGTGTCCTTCATCGCGGTGATGGTGCTGGCGCGCACCTGGCCGTGGCT GTCGAAGCTCGGCGTGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MNPKAHEPASLPVPGPDALAQSETLAASLRAEIAAAGGWLPFSRFMERALYAPGLGYYSGGARKFGRRGDDGSDFVTAPE LSPLFAHTLARPVAEALGASGTRRVMEFGAGTGRLAAGLLAALEALGAAPEHYQIVELSGELRERQRATLAAALPAALAA RVQWLDALPERFEGVVIGNEVLDAMPVRLVLRAAGAGAGWRERGVAVDAASRAFVFEDRPLAAHAPELIDTLAALDLPAG YLTETHEAARAFTRTVCTMLARGAAFFIDYGFPAAEYYHPQRAEGTLMCHYRHRAHGDPFVWPGLQDITAHVEFSGIHAA GVAAGAELLGYTSQGRFLLNAGITEVLAAIDPSDPARFLPAANAVQKLISEAEMGELFKVIAFGRGIDGLAAFARGERSH AL
Sequences:
>Translated_402_residues MNPKAHEPASLPVPGPDALAQSETLAASLRAEIAAAGGWLPFSRFMERALYAPGLGYYSGGARKFGRRGDDGSDFVTAPE LSPLFAHTLARPVAEALGASGTRRVMEFGAGTGRLAAGLLAALEALGAAPEHYQIVELSGELRERQRATLAAALPAALAA RVQWLDALPERFEGVVIGNEVLDAMPVRLVLRAAGAGAGWRERGVAVDAASRAFVFEDRPLAAHAPELIDTLAALDLPAG YLTETHEAARAFTRTVCTMLARGAAFFIDYGFPAAEYYHPQRAEGTLMCHYRHRAHGDPFVWPGLQDITAHVEFSGIHAA GVAAGAELLGYTSQGRFLLNAGITEVLAAIDPSDPARFLPAANAVQKLISEAEMGELFKVIAFGRGIDGLAAFARGERSH AL >Mature_402_residues MNPKAHEPASLPVPGPDALAQSETLAASLRAEIAAAGGWLPFSRFMERALYAPGLGYYSGGARKFGRRGDDGSDFVTAPE LSPLFAHTLARPVAEALGASGTRRVMEFGAGTGRLAAGLLAALEALGAAPEHYQIVELSGELRERQRATLAAALPAALAA RVQWLDALPERFEGVVIGNEVLDAMPVRLVLRAAGAGAGWRERGVAVDAASRAFVFEDRPLAAHAPELIDTLAALDLPAG YLTETHEAARAFTRTVCTMLARGAAFFIDYGFPAAEYYHPQRAEGTLMCHYRHRAHGDPFVWPGLQDITAHVEFSGIHAA GVAAGAELLGYTSQGRFLLNAGITEVLAAIDPSDPARFLPAANAVQKLISEAEMGELFKVIAFGRGIDGLAAFARGERSH AL
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI193211224, Length=363, Percent_Identity=24.7933884297521, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI24645885, Length=418, Percent_Identity=26.555023923445, Blast_Score=84, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42499; Mature: 42499
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPKAHEPASLPVPGPDALAQSETLAASLRAEIAAAGGWLPFSRFMERALYAPGLGYYSG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC GARKFGRRGDDGSDFVTAPELSPLFAHTLARPVAEALGASGTRRVMEFGAGTGRLAAGLL CHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHH AALEALGAAPEHYQIVELSGELRERQRATLAAALPAALAARVQWLDALPERFEGVVIGNE HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHH VLDAMPVRLVLRAAGAGAGWRERGVAVDAASRAFVFEDRPLAAHAPELIDTLAALDLPAG HHHHHHHHHHHHHCCCCCCHHHCCCEEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCH YLTETHEAARAFTRTVCTMLARGAAFFIDYGFPAAEYYHPQRAEGTLMCHYRHRAHGDPF HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCCCCCCEEEEEEHHCCCCCC VWPGLQDITAHVEFSGIHAAGVAAGAELLGYTSQGRFLLNAGITEVLAAIDPSDPARFLP CCCCHHHHHEEEEECCCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCCCCCHHHHH AANAVQKLISEAEMGELFKVIAFGRGIDGLAAFARGERSHAL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MNPKAHEPASLPVPGPDALAQSETLAASLRAEIAAAGGWLPFSRFMERALYAPGLGYYSG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC GARKFGRRGDDGSDFVTAPELSPLFAHTLARPVAEALGASGTRRVMEFGAGTGRLAAGLL CHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHH AALEALGAAPEHYQIVELSGELRERQRATLAAALPAALAARVQWLDALPERFEGVVIGNE HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHH VLDAMPVRLVLRAAGAGAGWRERGVAVDAASRAFVFEDRPLAAHAPELIDTLAALDLPAG HHHHHHHHHHHHHCCCCCCHHHCCCEEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCH YLTETHEAARAFTRTVCTMLARGAAFFIDYGFPAAEYYHPQRAEGTLMCHYRHRAHGDPF HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCCCCCCEEEEEEHHCCCCCC VWPGLQDITAHVEFSGIHAAGVAAGAELLGYTSQGRFLLNAGITEVLAAIDPSDPARFLP CCCCHHHHHEEEEECCCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCCCCCHHHHH AANAVQKLISEAEMGELFKVIAFGRGIDGLAAFARGERSHAL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA