| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028818
Identifier: 238028818
GI number: 238028818
Start: 3736239
End: 3736613
Strand: Reverse
Name: 238028818
Synonym: bglu_1g32830
Alternate gene names: NA
Gene position: 3736613-3736239 (Counterclockwise)
Preceding gene: 238028819
Following gene: 238028810
Centisome position: 95.65
GC content: 72.27
Gene sequence:
>375_bases ATGTCCGATTTACCGCCGCGCGTGATCGCCACCGACGAGGCGCGCCAGCTCATCGACGCGCTGAGCCGCCGCCACGGCGC GCTGATGTTCCATCAGTCGGGCGGCTGCTGCGACGGCAGCGCGCCGATGTGCCTCGCGCAGGGCGAGCTGATCCTCGGCG AGGCCGACATCTGCCTCGGCACCATCGGCGGCGTGTCGTTCCACATGCACGAGGCGCAGTACGCGGCCTGGCGGCACCTG CAGCTGATCGTCGACGCGGTGCCCGGCAAGGCCGGCATGTTCTCGCTGGAGGGGCCGACCGGCTGGCGCTTCGTCACGCG CTCGCGGCCGTTCACCGCCGACGAGCTGCGGCGGCTGGCACCGGCCTCGGACTGA
Upstream 100 bases:
>100_bases ACGTACCATCGGATCACCTGCAACCCGCATGCCGAGCGGGCCGGCGGCGGCGAGCCCTGCCGGGCGCCGGCCCGCTCGGC GCCGCCATCGGGAGTCCGCC
Downstream 100 bases:
>100_bases GCGCGGGAGGCACGGCCGCGCCGTGCCCGCTTCGGAACGGCCCGCGGCTTTTCAGCTGCTGGTCTTGCGGCTCGAGCGCG GCGATGCGGTCGCGATAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSDLPPRVIATDEARQLIDALSRRHGALMFHQSGGCCDGSAPMCLAQGELILGEADICLGTIGGVSFHMHEAQYAAWRHL QLIVDAVPGKAGMFSLEGPTGWRFVTRSRPFTADELRRLAPASD
Sequences:
>Translated_124_residues MSDLPPRVIATDEARQLIDALSRRHGALMFHQSGGCCDGSAPMCLAQGELILGEADICLGTIGGVSFHMHEAQYAAWRHL QLIVDAVPGKAGMFSLEGPTGWRFVTRSRPFTADELRRLAPASD >Mature_123_residues SDLPPRVIATDEARQLIDALSRRHGALMFHQSGGCCDGSAPMCLAQGELILGEADICLGTIGGVSFHMHEAQYAAWRHLQ LIVDAVPGKAGMFSLEGPTGWRFVTRSRPFTADELRRLAPASD
Specific function: Unknown
COG id: COG3564
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13406; Mature: 13274
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLPPRVIATDEARQLIDALSRRHGALMFHQSGGCCDGSAPMCLAQGELILGEADICLG CCCCCCCEEECHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCCEEECCCCEEEE TIGGVSFHMHEAQYAAWRHLQLIVDAVPGKAGMFSLEGPTGWRFVTRSRPFTADELRRLA ECCCEEEEEHHHHHHHHHHHHHEEECCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHC PASD CCCC >Mature Secondary Structure SDLPPRVIATDEARQLIDALSRRHGALMFHQSGGCCDGSAPMCLAQGELILGEADICLG CCCCCCEEECHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCCEEECCCCEEEE TIGGVSFHMHEAQYAAWRHLQLIVDAVPGKAGMFSLEGPTGWRFVTRSRPFTADELRRLA ECCCEEEEEHHHHHHHHHHHHHEEECCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHC PASD CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA