| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028799
Identifier: 238028799
GI number: 238028799
Start: 3714209
End: 3715168
Strand: Direct
Name: 238028799
Synonym: bglu_1g32630
Alternate gene names: NA
Gene position: 3714209-3715168 (Clockwise)
Preceding gene: 238028797
Following gene: 238028803
Centisome position: 95.08
GC content: 68.75
Gene sequence:
>960_bases ATGGCCCTGCCCGCCGTCCTCCAGCGCCTGTCGCTGCCCGTCATCGCCTCGCCGATGTTCATCGTCAGCTATCCCGAACT GGTGCTCGCGCAGTGCAAGGCGGGCATCGTCGGCTCGTTCCCCGCGCTCAACGCGCGGCCGGCCGAACTGCTCGACGAAT GGCTCACGCGCATCGAGGAGGAGCTCGCCGCACACCGCGAGCAGCATCCCGATGCGGTGATCGGGCCGATGGCGGTCAAC CAGATCGTCCATCAGTCGAACGTGCGGCTCGAACACGACGTGCGCGTGTGCGTCGAGCACAAGGTGCCGATCTTCATCAC CAGCCTGCGCGCGCCGGCCCCGGAGATCGTGCAGGCGGTACACAGCTACGGCGGCATCGTGCTGCACGACGTGATCAGCC TGCGCCACGCGCAGAAGGCGCTCGAAGCCGGCGTGGACGGGCTGATCCTGGTGGCGGCCGGCGCGGGCGGCCATGCCGGC ACCACCTCGCCGTTCGCGCTGGTGGGCGAGGTGCGGCGCATGTTCGACGGCCCGCTGGTGCTGTCGGGCTCGATCGCCAA CGGCGGCTCGATCCTCGCCGCACAGGCGATGGGCGCCGACCTCGCCTACATGGGCACGCGCTTCATCGCCACGCGCGAGG CGCACGCGGTGGACGGCTACAAGCAGGCGATCGTCAACGCGAAAGCGGCCGACATCGTCTACACGAACCTGTTCACCGGC GTGCACGGCAACTACATTCGCGAGAGCATCGTGAACGCCGGGCTCGATCCGGACGCGCTGCCCGAGGCCGACAAGTCGAA GATGAATTTCGCCAACGACAAGGCGAAGGCGTGGAAGGACATCTGGGGTGCGGGGCAGGGCGTGGGGCTGATGGATGACG TGCCGAGCGTGGCCGAGCTGGTCGAGCGGCTCGCGCGCGAATACGCCGACGCAAAGACGCGGCTCGGCATTCGCGGCTGA
Upstream 100 bases:
>100_bases GCCGCCGGCGCGGCCCGCGACGCGCGCGAAGCGACGCGCCGCTACACTCATGTGGCCGCCCGCGACCGACGCGAGCGGCG CCGCCTCCGGAGACCCCATC
Downstream 100 bases:
>100_bases CGCCGCGGCTTGCCCGAACGCGGCTTGCCTGAATGCGGCGCCGGCCCGGCCGCGCGCCGGGCACGGCGGCCGCGCCGGGC GCGGGCGCCGGCGCGCTCAG
Product: putative 2-nitropropane dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MALPAVLQRLSLPVIASPMFIVSYPELVLAQCKAGIVGSFPALNARPAELLDEWLTRIEEELAAHREQHPDAVIGPMAVN QIVHQSNVRLEHDVRVCVEHKVPIFITSLRAPAPEIVQAVHSYGGIVLHDVISLRHAQKALEAGVDGLILVAAGAGGHAG TTSPFALVGEVRRMFDGPLVLSGSIANGGSILAAQAMGADLAYMGTRFIATREAHAVDGYKQAIVNAKAADIVYTNLFTG VHGNYIRESIVNAGLDPDALPEADKSKMNFANDKAKAWKDIWGAGQGVGLMDDVPSVAELVERLAREYADAKTRLGIRG
Sequences:
>Translated_319_residues MALPAVLQRLSLPVIASPMFIVSYPELVLAQCKAGIVGSFPALNARPAELLDEWLTRIEEELAAHREQHPDAVIGPMAVN QIVHQSNVRLEHDVRVCVEHKVPIFITSLRAPAPEIVQAVHSYGGIVLHDVISLRHAQKALEAGVDGLILVAAGAGGHAG TTSPFALVGEVRRMFDGPLVLSGSIANGGSILAAQAMGADLAYMGTRFIATREAHAVDGYKQAIVNAKAADIVYTNLFTG VHGNYIRESIVNAGLDPDALPEADKSKMNFANDKAKAWKDIWGAGQGVGLMDDVPSVAELVERLAREYADAKTRLGIRG >Mature_318_residues ALPAVLQRLSLPVIASPMFIVSYPELVLAQCKAGIVGSFPALNARPAELLDEWLTRIEEELAAHREQHPDAVIGPMAVNQ IVHQSNVRLEHDVRVCVEHKVPIFITSLRAPAPEIVQAVHSYGGIVLHDVISLRHAQKALEAGVDGLILVAAGAGGHAGT TSPFALVGEVRRMFDGPLVLSGSIANGGSILAAQAMGADLAYMGTRFIATREAHAVDGYKQAIVNAKAADIVYTNLFTGV HGNYIRESIVNAGLDPDALPEADKSKMNFANDKAKAWKDIWGAGQGVGLMDDVPSVAELVERLAREYADAKTRLGIRG
Specific function: Catalyzes the oxidative denitrification of nitronates to their corresponding aldehydes and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 33981; Mature: 33850
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPAVLQRLSLPVIASPMFIVSYPELVLAQCKAGIVGSFPALNARPAELLDEWLTRIEE CCHHHHHHHHCCCHHCCCHHEECCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH ELAAHREQHPDAVIGPMAVNQIVHQSNVRLEHDVRVCVEHKVPIFITSLRAPAPEIVQAV HHHHHHHCCCCCEECHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHH HSYGGIVLHDVISLRHAQKALEAGVDGLILVAAGAGGHAGTTSPFALVGEVRRMFDGPLV HHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEE LSGSIANGGSILAAQAMGADLAYMGTRFIATREAHAVDGYKQAIVNAKAADIVYTNLFTG EECCCCCCCCEEEHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHC VHGNYIRESIVNAGLDPDALPEADKSKMNFANDKAKAWKDIWGAGQGVGLMDDVPSVAEL CCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHH VERLAREYADAKTRLGIRG HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ALPAVLQRLSLPVIASPMFIVSYPELVLAQCKAGIVGSFPALNARPAELLDEWLTRIEE CHHHHHHHHCCCHHCCCHHEECCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH ELAAHREQHPDAVIGPMAVNQIVHQSNVRLEHDVRVCVEHKVPIFITSLRAPAPEIVQAV HHHHHHHCCCCCEECHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHH HSYGGIVLHDVISLRHAQKALEAGVDGLILVAAGAGGHAGTTSPFALVGEVRRMFDGPLV HHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEE LSGSIANGGSILAAQAMGADLAYMGTRFIATREAHAVDGYKQAIVNAKAADIVYTNLFTG EECCCCCCCCEEEHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHC VHGNYIRESIVNAGLDPDALPEADKSKMNFANDKAKAWKDIWGAGQGVGLMDDVPSVAEL CCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHH VERLAREYADAKTRLGIRG HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]