| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is ydhL [C]
Identifier: 238028797
GI number: 238028797
Start: 3712425
End: 3712688
Strand: Direct
Name: ydhL [C]
Synonym: bglu_1g32610
Alternate gene names: 238028797
Gene position: 3712425-3712688 (Clockwise)
Preceding gene: 238028796
Following gene: 238028799
Centisome position: 95.03
GC content: 75.76
Gene sequence:
>264_bases ATGAGCGGCGGCGCACGAGATCCGGCGAACGATACGATCGCGGCGGCCGGCGCGGCGGCCGAGACACCCGCCGCCGCCAT CGCCTCGCCCTGCACCAACGTCTGCAAGATGGACCGCGAGGCGGGCTGGTGCATCGGCTGCCGCCGCACACGCGACGAGA TCGCCGCGTGGCGCAAGCTCGACGACGCGGGCCGGCTGGCGATCCTCGCGCGGCTCGAGGCGCGCTGGTTCGACGACGCG GCGGCACCGACCGGCGCCGCCTGA
Upstream 100 bases:
>100_bases CCGCGGCGGGCCATCCGCATGCGGTATTCGAGCTGTCGCCCCGGGAACTCGTCGCGCTGACGGGCGCGCCGGTCGCCGAC GTCGCCCTGCGGGAGCCGGC
Downstream 100 bases:
>100_bases GCGGCCCATGCGGGCGGCCGCGCAGCCGGGCCGGCGCGAGACCGCGAAGGCGCCGGGCCAGGCTCGGCCGGCGCCGCTCG CCGGCGCCGCGCGAACAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MSGGARDPANDTIAAAGAAAETPAAAIASPCTNVCKMDREAGWCIGCRRTRDEIAAWRKLDDAGRLAILARLEARWFDDA AAPTGAA
Sequences:
>Translated_87_residues MSGGARDPANDTIAAAGAAAETPAAAIASPCTNVCKMDREAGWCIGCRRTRDEIAAWRKLDDAGRLAILARLEARWFDDA AAPTGAA >Mature_86_residues SGGARDPANDTIAAAGAAAETPAAAIASPCTNVCKMDREAGWCIGCRRTRDEIAAWRKLDDAGRLAILARLEARWFDDAA APTGAA
Specific function: Unknown
COG id: COG3313
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9017; Mature: 8886
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGARDPANDTIAAAGAAAETPAAAIASPCTNVCKMDREAGWCIGCRRTRDEIAAWRKL CCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHC DDAGRLAILARLEARWFDDAAAPTGAA CCCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SGGARDPANDTIAAAGAAAETPAAAIASPCTNVCKMDREAGWCIGCRRTRDEIAAWRKL CCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHC DDAGRLAILARLEARWFDDAAAPTGAA CCCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA