| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238028793
Identifier: 238028793
GI number: 238028793
Start: 3709025
End: 3709657
Strand: Reverse
Name: 238028793
Synonym: bglu_1g32570
Alternate gene names: NA
Gene position: 3709657-3709025 (Counterclockwise)
Preceding gene: 238028798
Following gene: 238028791
Centisome position: 94.96
GC content: 73.62
Gene sequence:
>633_bases ATGTCCAACTGCAGCAAAGCGTCGGCGTGGCCGCCGCGTGTCGTGACCGTGCCCGGCCTGCATGGCAGCGAGGCTGCGCA CTGGCAGACCTGGCTCGAGCGCCAGTTCGCGCATACGCTGCGCGTGCAGCAGGACGACTGGGAGGCGCCGCATCTGGCGC GCTGGTCCGGCGCGGTGCGCGACACGCTCGCGCGCGAGCGCGGCCCGTTCGTGCTGGCCGCGCACAGCTTCGGCTGCCTC GCCGCCGCGCATGCGCTGCAGCGCGGCGAACTGGGCGCCGAGGTGGTCGGCGTGCTGTTCGTCGCGCCGGCCAACCCGGT GAAATTCGCCTTTGCGGGGACGTTCGAGGCGCACCGGCTGCCGGTGCCGTCGATCCTGATCGGCAGCGAGACCGATCCGT GGATGACGCTCGCCGACGCGCGCGAGATGGCGCGCCGGTTCGGCAGCGCGTTCGTCAACCTCGGCGACGCGGGCCACGTC AACACCGCGGCCGGCTTCGGGCCATGGCCGCGCGCCAAATACCTCATCGATACGCTGGTGCATTGCGCGGCGCCGCAGCG GTTTCGCGGGGCGCCGCGCGACCCGGCCGCCTTGCCGGCGGCGCCGCGGCGCGACTTCGCGTTCGCGGTCTGA
Upstream 100 bases:
>100_bases CGCCAGTCCGAAATTGCTAAGCACGATAAATTGGTTCTCCCCGCCCGCCGCGCGGCCGACAATCGGCTTCGACTCCACCG GCCCAGCGAAGGAGGCAACG
Downstream 100 bases:
>100_bases GCGAGCCGCGCCGGGCGTTGCCCGCCCGTTGCCCGCCAGGCGGCGCGGCGCGAGGCCGGCCGGTGCATCGTGACGGGCGC CCGCTGCCAGGGCGGGCCGG
Product: alpha/beta hydrolase fold esterase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MSNCSKASAWPPRVVTVPGLHGSEAAHWQTWLERQFAHTLRVQQDDWEAPHLARWSGAVRDTLARERGPFVLAAHSFGCL AAAHALQRGELGAEVVGVLFVAPANPVKFAFAGTFEAHRLPVPSILIGSETDPWMTLADAREMARRFGSAFVNLGDAGHV NTAAGFGPWPRAKYLIDTLVHCAAPQRFRGAPRDPAALPAAPRRDFAFAV
Sequences:
>Translated_210_residues MSNCSKASAWPPRVVTVPGLHGSEAAHWQTWLERQFAHTLRVQQDDWEAPHLARWSGAVRDTLARERGPFVLAAHSFGCL AAAHALQRGELGAEVVGVLFVAPANPVKFAFAGTFEAHRLPVPSILIGSETDPWMTLADAREMARRFGSAFVNLGDAGHV NTAAGFGPWPRAKYLIDTLVHCAAPQRFRGAPRDPAALPAAPRRDFAFAV >Mature_209_residues SNCSKASAWPPRVVTVPGLHGSEAAHWQTWLERQFAHTLRVQQDDWEAPHLARWSGAVRDTLARERGPFVLAAHSFGCLA AAHALQRGELGAEVVGVLFVAPANPVKFAFAGTFEAHRLPVPSILIGSETDPWMTLADAREMARRFGSAFVNLGDAGHVN TAAGFGPWPRAKYLIDTLVHCAAPQRFRGAPRDPAALPAAPRRDFAFAV
Specific function: Unknown
COG id: COG3545
COG function: function code R; Predicted esterase of the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22762; Mature: 22631
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNCSKASAWPPRVVTVPGLHGSEAAHWQTWLERQFAHTLRVQQDDWEAPHLARWSGAVR CCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH DTLARERGPFVLAAHSFGCLAAAHALQRGELGAEVVGVLFVAPANPVKFAFAGTFEAHRL HHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCHHEEEEEEECCCCCEEEEEECCCCCCCC PVPSILIGSETDPWMTLADAREMARRFGSAFVNLGDAGHVNTAAGFGPWPRAKYLIDTLV CCCEEEECCCCCCCEEHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHH HCAAPQRFRGAPRDPAALPAAPRRDFAFAV HHCCCHHHCCCCCCCCCCCCCCCCCCEECC >Mature Secondary Structure SNCSKASAWPPRVVTVPGLHGSEAAHWQTWLERQFAHTLRVQQDDWEAPHLARWSGAVR CCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH DTLARERGPFVLAAHSFGCLAAAHALQRGELGAEVVGVLFVAPANPVKFAFAGTFEAHRL HHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCHHEEEEEEECCCCCEEEEEECCCCCCCC PVPSILIGSETDPWMTLADAREMARRFGSAFVNLGDAGHVNTAAGFGPWPRAKYLIDTLV CCCEEEECCCCCCCEEHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHH HCAAPQRFRGAPRDPAALPAAPRRDFAFAV HHCCCHHHCCCCCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA