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The map label for this gene is shlB [H]

Identifier: 238028787

GI number: 238028787

Start: 3696658

End: 3697992

Strand: Reverse

Name: shlB [H]

Synonym: bglu_1g32510

Alternate gene names: 238028787

Gene position: 3697992-3696658 (Counterclockwise)

Preceding gene: 238028788

Following gene: 238028786

Centisome position: 94.66

GC content: 67.94

Gene sequence:

>1335_bases
ATGAACAAGAATATCGGCCGGCGCGTCCGGCCATCCGCAAGCGCGCGCGGCGTCGGGGCCAACCGTCGCGTGCATCGAGG
GCTGCTGCGCCGGATCGCGCCGATCTGCGGCGCGTCATGGGCCGTCCTGCATCTGCACCTGGCCGCCGCGCAGGCCGTCG
ATCCGCTCGCCGAGCAGGAGCAGCGCCGCCGCGCGCAGCAGCAGCAGATCGAGCGCGAGCGCGCCGCACACGCGCCGAAC
GTCACGCTGCAGGCGCCCGCGGCGCCGGCCGTGGACGACGGCAGGCTGCCCGCCGAGACACCTTGTTTTCGCATCGATTC
ACTCGCGCTCGAGGTGCCGCCGGGCCTCAGCGAAGCCGTGGAGGCGGCCGGTGCCCGCGCGCTGCTGCCGAACCCGCTGT
TTCCCGGCGAACTGCGCTTTGCCGACGAGTACCTGCAGCGCTATCGCGGCCGGTGCGTCGGCACGCAGGGCCTCAACCTG
ATCGTGCATCGCGTGATGTCGCGGCTGATCGAGCGCGGCTACTCCACCACGCGCGTGCTGATCGGGCCGCAGGATCTGTC
GAGCGGCAAGCTCAGGCTGCAATTGATTCCCGGCGTGATCAGCGCGATCCGCTTCGCCGATCCGTCGATCTATGGCACCT
GGCGCAATGCGTTTCCGACCCGGCCCGGCCAATTGCTGAACCTGCGCGATCTGGAGCAGGGCCTCGAGCAGATGAAGCGC
GTGCCGGACCAGGACGTCGATATGCAGATCGTGCCGGGCGCGGCGGTCGGCGAGAGCGATGTGGTGATTTTCGTCAAGCG
CACGAAGCCGTGGGCGCTGACGCTGAGCGCCGACGACAGCGGCTTCAAGTCCACCGGTCAGCTGCAGGGCAGCGCGAGCC
TCACGATCGACAATCCGCTCGGGCTGTCGGACCTGCTCAATCTCGGCTACACGCACGACATCAACGGCCATGCGAGCAAG
TACGGCACGCACGGGGCGAGCGCGTTCTATTCGATTCCGTGGGGCAACTGGACCTTCACCGCCACCGCGAGCCAGTATGA
CTATCATCAGCAGATCGCGGAGGCGTCCACGGCGCTGGTGTCGAGCGGCAAGTCGAAGACCTTCGACCTGAAGGCGGAGT
ACCAGTTCTACCGCAACCAGGTGCAGAAGAACTCGATCGAGTTTCGCGTGGGGCGGCGCGATCGGCGGCCACGCGGCCCT
GAGCGCCAAGCTGGCCGGCACGCTGAACAATGCGCAGGGCAATTGGTCTCGAACGCGGACCTTTCCGTGACGAGCGGCGC
GGTGCTGACCAATACCGGCGGGGTGATCAACGCGAGCGGCAACGGCAGCGTGTAG

Upstream 100 bases:

>100_bases
CGGGGTAGGCGGGCGCGCCGGCGGCACGCGTGAGCCGGCGCGACGGGTGTTGCTCCCGAGCCGGCGCATGAGAGTTTGGC
GCCGCTCGCTGCCACACGCC

Downstream 100 bases:

>100_bases
GCCGCCTCGCTCACCAACGGCGGCGGCATCACGGCCGGCAACGCGCTGACGGTGAGCGCGGCCGGCCTGCTCGCGCTGAT
GGCGCCCGACATCGAGAATC

Product: hemolysin activator translocator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MNKNIGRRVRPSASARGVGANRRVHRGLLRRIAPICGASWAVLHLHLAAAQAVDPLAEQEQRRRAQQQQIERERAAHAPN
VTLQAPAAPAVDDGRLPAETPCFRIDSLALEVPPGLSEAVEAAGARALLPNPLFPGELRFADEYLQRYRGRCVGTQGLNL
IVHRVMSRLIERGYSTTRVLIGPQDLSSGKLRLQLIPGVISAIRFADPSIYGTWRNAFPTRPGQLLNLRDLEQGLEQMKR
VPDQDVDMQIVPGAAVGESDVVIFVKRTKPWALTLSADDSGFKSTGQLQGSASLTIDNPLGLSDLLNLGYTHDINGHASK
YGTHGASAFYSIPWGNWTFTATASQYDYHQQIAEASTALVSSGKSKTFDLKAEYQFYRNQVQKNSIEFRVGRRDRRPRGP
ERQAGRHAEQCAGQLVSNADLSVTSGAVLTNTGGVINASGNGSV

Sequences:

>Translated_444_residues
MNKNIGRRVRPSASARGVGANRRVHRGLLRRIAPICGASWAVLHLHLAAAQAVDPLAEQEQRRRAQQQQIERERAAHAPN
VTLQAPAAPAVDDGRLPAETPCFRIDSLALEVPPGLSEAVEAAGARALLPNPLFPGELRFADEYLQRYRGRCVGTQGLNL
IVHRVMSRLIERGYSTTRVLIGPQDLSSGKLRLQLIPGVISAIRFADPSIYGTWRNAFPTRPGQLLNLRDLEQGLEQMKR
VPDQDVDMQIVPGAAVGESDVVIFVKRTKPWALTLSADDSGFKSTGQLQGSASLTIDNPLGLSDLLNLGYTHDINGHASK
YGTHGASAFYSIPWGNWTFTATASQYDYHQQIAEASTALVSSGKSKTFDLKAEYQFYRNQVQKNSIEFRVGRRDRRPRGP
ERQAGRHAEQCAGQLVSNADLSVTSGAVLTNTGGVINASGNGSV
>Mature_444_residues
MNKNIGRRVRPSASARGVGANRRVHRGLLRRIAPICGASWAVLHLHLAAAQAVDPLAEQEQRRRAQQQQIERERAAHAPN
VTLQAPAAPAVDDGRLPAETPCFRIDSLALEVPPGLSEAVEAAGARALLPNPLFPGELRFADEYLQRYRGRCVGTQGLNL
IVHRVMSRLIERGYSTTRVLIGPQDLSSGKLRLQLIPGVISAIRFADPSIYGTWRNAFPTRPGQLLNLRDLEQGLEQMKR
VPDQDVDMQIVPGAAVGESDVVIFVKRTKPWALTLSADDSGFKSTGQLQGSASLTIDNPLGLSDLLNLGYTHDINGHASK
YGTHGASAFYSIPWGNWTFTATASQYDYHQQIAEASTALVSSGKSKTFDLKAEYQFYRNQVQKNSIEFRVGRRDRRPRGP
ERQAGRHAEQCAGQLVSNADLSVTSGAVLTNTGGVINASGNGSV

Specific function: Member of a two partner secretion pathway (TPS) in which it mediates the secretion of hemolysin [H]

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tpsB (TC 1.B.20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005565
- InterPro:   IPR013686 [H]

Pfam domain/function: PF08479 POTRA_2; PF03865 ShlB [H]

EC number: NA

Molecular weight: Translated: 48322; Mature: 48322

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNIGRRVRPSASARGVGANRRVHRGLLRRIAPICGASWAVLHLHLAAAQAVDPLAEQE
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHH
QRRRAQQQQIERERAAHAPNVTLQAPAAPAVDDGRLPAETPCFRIDSLALEVPPGLSEAV
HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCEEECCEEEECCCCHHHHH
EAAGARALLPNPLFPGELRFADEYLQRYRGRCVGTQGLNLIVHRVMSRLIERGYSTTRVL
HHCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
IGPQDLSSGKLRLQLIPGVISAIRFADPSIYGTWRNAFPTRPGQLLNLRDLEQGLEQMKR
ECCCCCCCCCEEEEEHHHHHHHHHHCCCCEEECHHHCCCCCCCCCCCHHHHHHHHHHHHH
VPDQDVDMQIVPGAAVGESDVVIFVKRTKPWALTLSADDSGFKSTGQLQGSASLTIDNPL
CCCCCCCEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCC
GLSDLLNLGYTHDINGHASKYGTHGASAFYSIPWGNWTFTATASQYDYHQQIAEASTALV
CHHHHHHCCCCCCCCCCHHHCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHH
SSGKSKTFDLKAEYQFYRNQVQKNSIEFRVGRRDRRPRGPERQAGRHAEQCAGQLVSNAD
HCCCCCEEEEHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHCCHHHHHHHHHHCCCC
LSVTSGAVLTNTGGVINASGNGSV
CEEECCEEEECCCCEEECCCCCCC
>Mature Secondary Structure
MNKNIGRRVRPSASARGVGANRRVHRGLLRRIAPICGASWAVLHLHLAAAQAVDPLAEQE
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHH
QRRRAQQQQIERERAAHAPNVTLQAPAAPAVDDGRLPAETPCFRIDSLALEVPPGLSEAV
HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCEEECCEEEECCCCHHHHH
EAAGARALLPNPLFPGELRFADEYLQRYRGRCVGTQGLNLIVHRVMSRLIERGYSTTRVL
HHCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
IGPQDLSSGKLRLQLIPGVISAIRFADPSIYGTWRNAFPTRPGQLLNLRDLEQGLEQMKR
ECCCCCCCCCEEEEEHHHHHHHHHHCCCCEEECHHHCCCCCCCCCCCHHHHHHHHHHHHH
VPDQDVDMQIVPGAAVGESDVVIFVKRTKPWALTLSADDSGFKSTGQLQGSASLTIDNPL
CCCCCCCEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCC
GLSDLLNLGYTHDINGHASKYGTHGASAFYSIPWGNWTFTATASQYDYHQQIAEASTALV
CHHHHHHCCCCCCCCCCHHHCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHH
SSGKSKTFDLKAEYQFYRNQVQKNSIEFRVGRRDRRPRGPERQAGRHAEQCAGQLVSNAD
HCCCCCEEEEHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHCCHHHHHHHHHHCCCC
LSVTSGAVLTNTGGVINASGNGSV
CEEECCEEEECCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3290200 [H]