| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is can [H]
Identifier: 238028774
GI number: 238028774
Start: 3678556
End: 3679326
Strand: Direct
Name: can [H]
Synonym: bglu_1g32380
Alternate gene names: 238028774
Gene position: 3678556-3679326 (Clockwise)
Preceding gene: 238028773
Following gene: 238028775
Centisome position: 94.16
GC content: 66.41
Gene sequence:
>771_bases ATGACCACCAACGCCCACCCGCTCTCCGACCTGTTCGAGAACAACGAGACCTGGGTCAACCGCAAACTCGCCGAAGATCC GCACTTCTTCGAACGCCTGAAGGACCAGCAGGCCCCGGCCTACCTGTGGATCGGCTGCTCCGATTCCCGCGTGCCGGCCA ACCAGATCGTCGGGCTGCAGCCCGGCGAGGTGTTCGTGCATCGCAACATCGCCAACGTGGTGGTGCACAGCGACCTGAAC TGCCTGTCGGTGGTGCAGTTCGCCGTCGACATCCTGAAGGTCAAGCACATCATGGTGGTGGGCCATTACGGCTGCTCGGG CGTGAACGCCGCGCTCACCAACCGCCGCGTCGGGCTCGCCGACAACTGGCTGCACCACGTGCAGGACGTGCGCGACAAGC ACGCGGCGCTGCTCGAAGAATGGCCGCTCGGCGAGGCGCGCTACCGCCGCCTGATCGAGCTGAACGCGATCGAGCAGGTG GTCAACCTGTGCCGCACCACCATCGTCGGCGACGCCTGGGCGCGCGGCCAGGCGCTGTCGGTACACGGCCTGGTGTACGG CGTCCACGACGGCAGGATGCGCAACCTCGGCATGACGGTCGCGTCGCCCGAGGCGCTGGAACCCGTTCATCGCCGCTGCG TCGACGCATTGTCGGCGGGGCGTGCACTGTCGGCGGACAACGATATGGTCGCGGCCGATGCGGCGAAGCTCGCCGACGTC GCCGAACAGGTCGCGAATACTCTGATGGAGACGAAACATGACGACTGCTGA
Upstream 100 bases:
>100_bases CGCTATCCCGAGCGCTTCGCCGGCCACGGCGCGGCCCCGGCCGCCCCACGCGCGGCCTGAGCACGGCGACGCCCCTTACT CCCTGTCACGGACCCTCGCG
Downstream 100 bases:
>100_bases ACGTGATCCGGTCGTGATCGCCGCGGCGGCACGCACGCCGATCGCGGGCTTCCAGGGCGGCTTCGCGCCGCTCACCGCGC CGCAGCTCGGCAGCGCCGCG
Product: beta carbonic anhydrase
Products: NA
Alternate protein names: Carbonate dehydratase 2 [H]
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MTTNAHPLSDLFENNETWVNRKLAEDPHFFERLKDQQAPAYLWIGCSDSRVPANQIVGLQPGEVFVHRNIANVVVHSDLN CLSVVQFAVDILKVKHIMVVGHYGCSGVNAALTNRRVGLADNWLHHVQDVRDKHAALLEEWPLGEARYRRLIELNAIEQV VNLCRTTIVGDAWARGQALSVHGLVYGVHDGRMRNLGMTVASPEALEPVHRRCVDALSAGRALSADNDMVAADAAKLADV AEQVANTLMETKHDDC
Sequences:
>Translated_256_residues MTTNAHPLSDLFENNETWVNRKLAEDPHFFERLKDQQAPAYLWIGCSDSRVPANQIVGLQPGEVFVHRNIANVVVHSDLN CLSVVQFAVDILKVKHIMVVGHYGCSGVNAALTNRRVGLADNWLHHVQDVRDKHAALLEEWPLGEARYRRLIELNAIEQV VNLCRTTIVGDAWARGQALSVHGLVYGVHDGRMRNLGMTVASPEALEPVHRRCVDALSAGRALSADNDMVAADAAKLADV AEQVANTLMETKHDDC >Mature_255_residues TTNAHPLSDLFENNETWVNRKLAEDPHFFERLKDQQAPAYLWIGCSDSRVPANQIVGLQPGEVFVHRNIANVVVHSDLNC LSVVQFAVDILKVKHIMVVGHYGCSGVNAALTNRRVGLADNWLHHVQDVRDKHAALLEEWPLGEARYRRLIELNAIEQVV NLCRTTIVGDAWARGQALSVHGLVYGVHDGRMRNLGMTVASPEALEPVHRRCVDALSAGRALSADNDMVAADAAKLADVA EQVANTLMETKHDDC
Specific function: Unknown
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1786318, Length=215, Percent_Identity=52.093023255814, Blast_Score=241, Evalue=5e-65, Organism=Escherichia coli, GI1786534, Length=173, Percent_Identity=28.3236994219653, Blast_Score=67, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324292, Length=206, Percent_Identity=29.126213592233, Blast_Score=90, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 - InterPro: IPR015892 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 28304; Mature: 28173
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNAHPLSDLFENNETWVNRKLAEDPHFFERLKDQQAPAYLWIGCSDSRVPANQIVGLQ CCCCCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCHHHEECCC PGEVFVHRNIANVVVHSDLNCLSVVQFAVDILKVKHIMVVGHYGCSGVNAALTNRRVGLA CCCEEEECCHHHHHEECCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHCCCCCCH DNWLHHVQDVRDKHAALLEEWPLGEARYRRLIELNAIEQVVNLCRTTIVGDAWARGQALS HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEE VHGLVYGVHDGRMRNLGMTVASPEALEPVHRRCVDALSAGRALSADNDMVAADAAKLADV EEEEEEECCCCCCHHCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH AEQVANTLMETKHDDC HHHHHHHHHHHCCCCC >Mature Secondary Structure TTNAHPLSDLFENNETWVNRKLAEDPHFFERLKDQQAPAYLWIGCSDSRVPANQIVGLQ CCCCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCCHHHEECCC PGEVFVHRNIANVVVHSDLNCLSVVQFAVDILKVKHIMVVGHYGCSGVNAALTNRRVGLA CCCEEEECCHHHHHEECCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHCCCCCCH DNWLHHVQDVRDKHAALLEEWPLGEARYRRLIELNAIEQVVNLCRTTIVGDAWARGQALS HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEE VHGLVYGVHDGRMRNLGMTVASPEALEPVHRRCVDALSAGRALSADNDMVAADAAKLADV EEEEEEECCCCCCHHCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH AEQVANTLMETKHDDC HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503; 10493123 [H]