| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is aceK [H]
Identifier: 238028773
GI number: 238028773
Start: 3676707
End: 3678515
Strand: Direct
Name: aceK [H]
Synonym: bglu_1g32370
Alternate gene names: 238028773
Gene position: 3676707-3678515 (Clockwise)
Preceding gene: 238028771
Following gene: 238028774
Centisome position: 94.12
GC content: 67.0
Gene sequence:
>1809_bases ATGCACCACTTTCCCAAGCTGCTCTCCTCGCAGATCGGTTTCGACGTCGCCCGGACGATGCTGGACGGGTTCGATCGCCA TTACCGGGTGTTTCGCGACGCGGCCGTCGAGGCGAAGGCCCGGTTCGAGGCGGCAGACTGGCACGGGCTGCAGCGGCTCG CGCGCGAGCGCATCACGTCCTACGACGAGCGCGTGCGCGAATGCGTCGAGCAGCTGCAGGACGAATACGACGCCGAGCGC ATCGACGACGAGGTCTGGCAGCAGATCAAGCTGCACTACATCGGGCTGCTGACCACCCACCTGCAGCCCGAATGCGCGGA AACCTTCTTCAACTCGGTCTGCTGCAAGATCCTGCACCGCTCGTACTTCAACAACGACTTCATCTTCGTGCGCCCGGCGA TCTCGACCGACTACCTCGAGAACGCGGCGCCGGCCGCCAGGCCGACCTACCGCGCCTACTATCCGGCGCAGGACGGGCTG GCGGCCACGCTCGAGCGGATCGTCACGAACTTCCAGCTCGCGCCGCCGTTCGAGGACCTGAGGCGCGACACGGCCTGCCT GATGCAGGCGATCGACGACGAGTTCGGCCCGTTCAGCGAGGCCTTCAACTTCCAGATCCACGTGCTGTCGTCGCCGTTCT TCCGCAATCAGGCCGCCTATCTGGTCGGACGCATCGTCAACGGCGAGCGCGTGCTGCCGTTCGCGGTGCCGGTGCGCCAT GTCGGCGGCGGCAAGCTCGCGCTCGACACGGTGCTGCTGCGGCGCGAGCAGCTGCAGGTGCTGTTCGGCTTCGCGCATTC GTATTTCCTGGTGGACATGGACGTGCCGTCGGCCTACGTCGCGTTCCTCGGCTCGATCATGCCCGGCAAGCCGAAGGCCG AGATCTACACCGCGCTGGGGCTGCAGAAGCAGGGCAAGAACCTGTTCTACCGCGACCTGCTGCATCACCTCTCGCATTCG AGCGACCGCTTCGTGATCGCGCCCGGCATCAAGGGGCTCGTGATGCTGGTGTTCACGCTGCCGTCGTTCCCCTACGTGTT CAAGGCGATCAAGGACCGCTTCCCGCCGCCGAAGGACACCACGCGCGAGCAGATCATGGAGAAGTACCAGCTCGTCAAGC GCCACGACCGGCTCGGCCGGATGGCCGACACGCTCGAATACTCGAGCGTGGCGCTGCCGCTCGCGCGCCTCGACGAGGCG CTGCTGCGCGAGCTGGAGAAGGAAGCGCCGTCGCTGCTCGAATACGACGGCGACAGCGTGGTGATCCGGCACCTGTACAT CGAGCGGCGCATGACGCCGCTGAACCTCTACCTGCAGCACGGCAGCGACGCCGAGGTCGAGCACGGCGTGCAGGAATACG GCGATGCGATCAAGGAACTGATCCAGGCGAACATCTTCCCCGGCGACATGCTCTACAAGAACTTCGGGGTGACGCGCCAC GGCCGCGTGGTGTTCTACGACTACGACGAGATCGAATACCTGACCGACTGCCAGGTGCGCCGCGTGCCGCCGCCGCGCCA CGAGGACGACGAGCTCGCGAGCGAGCCGTGGTATTCGGTCGGCCCGCGCGACATCTTCCCCGAAACCTACGGGCCGTTCC TGCTCGGCGATCCGCGCGTGCGCAAGGCGTTCCTGGCCCGGCATCCGGACTTCTTCGATCCGGCGCTCTGGCAGGACAGC CAGGACCGGCTGCGGCGCGGCGAGCTGCCCGAGTTTTTCCCCTACGCTGCGTCGCTGCGGTTCCGCACGCGCTATCCCGA GCGCTTCGCCGGCCACGGCGCGGCCCCGGCCGCCCCACGCGCGGCCTGA
Upstream 100 bases:
>100_bases GGCCGGCCCCGGCCCCGCGCGGCCGGGCGCCAGGGCCGCGGCAACCAGCGCGGGTGACGGTAAAATGGCGGCTCGCCCCA GCCACGAGCCCGGACGGACC
Downstream 100 bases:
>100_bases GCACGGCGACGCCCCTTACTCCCTGTCACGGACCCTCGCGATGACCACCAACGCCCACCCGCTCTCCGACCTGTTCGAGA ACAACGAGACCTGGGTCAAC
Product: bifunctional isocitrate dehydrogenase kinase/phosphatase protein
Products: NA
Alternate protein names: IDH kinase/phosphatase; IDHK/P [H]
Number of amino acids: Translated: 602; Mature: 602
Protein sequence:
>602_residues MHHFPKLLSSQIGFDVARTMLDGFDRHYRVFRDAAVEAKARFEAADWHGLQRLARERITSYDERVRECVEQLQDEYDAER IDDEVWQQIKLHYIGLLTTHLQPECAETFFNSVCCKILHRSYFNNDFIFVRPAISTDYLENAAPAARPTYRAYYPAQDGL AATLERIVTNFQLAPPFEDLRRDTACLMQAIDDEFGPFSEAFNFQIHVLSSPFFRNQAAYLVGRIVNGERVLPFAVPVRH VGGGKLALDTVLLRREQLQVLFGFAHSYFLVDMDVPSAYVAFLGSIMPGKPKAEIYTALGLQKQGKNLFYRDLLHHLSHS SDRFVIAPGIKGLVMLVFTLPSFPYVFKAIKDRFPPPKDTTREQIMEKYQLVKRHDRLGRMADTLEYSSVALPLARLDEA LLRELEKEAPSLLEYDGDSVVIRHLYIERRMTPLNLYLQHGSDAEVEHGVQEYGDAIKELIQANIFPGDMLYKNFGVTRH GRVVFYDYDEIEYLTDCQVRRVPPPRHEDDELASEPWYSVGPRDIFPETYGPFLLGDPRVRKAFLARHPDFFDPALWQDS QDRLRRGELPEFFPYAASLRFRTRYPERFAGHGAAPAAPRAA
Sequences:
>Translated_602_residues MHHFPKLLSSQIGFDVARTMLDGFDRHYRVFRDAAVEAKARFEAADWHGLQRLARERITSYDERVRECVEQLQDEYDAER IDDEVWQQIKLHYIGLLTTHLQPECAETFFNSVCCKILHRSYFNNDFIFVRPAISTDYLENAAPAARPTYRAYYPAQDGL AATLERIVTNFQLAPPFEDLRRDTACLMQAIDDEFGPFSEAFNFQIHVLSSPFFRNQAAYLVGRIVNGERVLPFAVPVRH VGGGKLALDTVLLRREQLQVLFGFAHSYFLVDMDVPSAYVAFLGSIMPGKPKAEIYTALGLQKQGKNLFYRDLLHHLSHS SDRFVIAPGIKGLVMLVFTLPSFPYVFKAIKDRFPPPKDTTREQIMEKYQLVKRHDRLGRMADTLEYSSVALPLARLDEA LLRELEKEAPSLLEYDGDSVVIRHLYIERRMTPLNLYLQHGSDAEVEHGVQEYGDAIKELIQANIFPGDMLYKNFGVTRH GRVVFYDYDEIEYLTDCQVRRVPPPRHEDDELASEPWYSVGPRDIFPETYGPFLLGDPRVRKAFLARHPDFFDPALWQDS QDRLRRGELPEFFPYAASLRFRTRYPERFAGHGAAPAAPRAA >Mature_602_residues MHHFPKLLSSQIGFDVARTMLDGFDRHYRVFRDAAVEAKARFEAADWHGLQRLARERITSYDERVRECVEQLQDEYDAER IDDEVWQQIKLHYIGLLTTHLQPECAETFFNSVCCKILHRSYFNNDFIFVRPAISTDYLENAAPAARPTYRAYYPAQDGL AATLERIVTNFQLAPPFEDLRRDTACLMQAIDDEFGPFSEAFNFQIHVLSSPFFRNQAAYLVGRIVNGERVLPFAVPVRH VGGGKLALDTVLLRREQLQVLFGFAHSYFLVDMDVPSAYVAFLGSIMPGKPKAEIYTALGLQKQGKNLFYRDLLHHLSHS SDRFVIAPGIKGLVMLVFTLPSFPYVFKAIKDRFPPPKDTTREQIMEKYQLVKRHDRLGRMADTLEYSSVALPLARLDEA LLRELEKEAPSLLEYDGDSVVIRHLYIERRMTPLNLYLQHGSDAEVEHGVQEYGDAIKELIQANIFPGDMLYKNFGVTRH GRVVFYDYDEIEYLTDCQVRRVPPPRHEDDELASEPWYSVGPRDIFPETYGPFLLGDPRVRKAFLARHPDFFDPALWQDS QDRLRRGELPEFFPYAASLRFRTRYPERFAGHGAAPAAPRAA
Specific function: Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source
COG id: COG4579
COG function: function code T; Isocitrate dehydrogenase kinase/phosphatase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AceK family [H]
Homologues:
Organism=Escherichia coli, GI1790446, Length=572, Percent_Identity=41.6083916083916, Blast_Score=456, Evalue=1e-129,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010452 - ProDom: PD043552 [H]
Pfam domain/function: PF06315 AceK [H]
EC number: =2.7.11.5 [H]
Molecular weight: Translated: 69386; Mature: 69386
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHFPKLLSSQIGFDVARTMLDGFDRHYRVFRDAAVEAKARFEAADWHGLQRLARERITS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH YDERVRECVEQLQDEYDAERIDDEVWQQIKLHYIGLLTTHLQPECAETFFNSVCCKILHR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SYFNNDFIFVRPAISTDYLENAAPAARPTYRAYYPAQDGLAATLERIVTNFQLAPPFEDL HHCCCCEEEEECCCCHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCHHHH RRDTACLMQAIDDEFGPFSEAFNFQIHVLSSPFFRNQAAYLVGRIVNGERVLPFAVPVRH HHHHHHHHHHHHHCCCCHHHHCCEEEEEECCCCHHCHHHHHHHEEECCCEEEEEECCHHH VGGGKLALDTVLLRREQLQVLFGFAHSYFLVDMDVPSAYVAFLGSIMPGKPKAEIYTALG CCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHC LQKQGKNLFYRDLLHHLSHSSDRFVIAPGIKGLVMLVFTLPSFPYVFKAIKDRFPPPKDT CHHCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC TREQIMEKYQLVKRHDRLGRMADTLEYSSVALPLARLDEALLRELEKEAPSLLEYDGDSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHH VIRHLYIERRMTPLNLYLQHGSDAEVEHGVQEYGDAIKELIQANIFPGDMLYKNFGVTRH HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC GRVVFYDYDEIEYLTDCQVRRVPPPRHEDDELASEPWYSVGPRDIFPETYGPFLLGDPRV CEEEEEECCHHHHHHCCCEECCCCCCCCCHHHHCCCCCCCCCHHCCCCCCCCCCCCCHHH RKAFLARHPDFFDPALWQDSQDRLRRGELPEFFPYAASLRFRTRYPERFAGHGAAPAAPR HHHHHHCCCCCCCHHHCCCCHHHHHCCCCCCHHHHHHHEEHHCCCCHHHCCCCCCCCCCC AA CC >Mature Secondary Structure MHHFPKLLSSQIGFDVARTMLDGFDRHYRVFRDAAVEAKARFEAADWHGLQRLARERITS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH YDERVRECVEQLQDEYDAERIDDEVWQQIKLHYIGLLTTHLQPECAETFFNSVCCKILHR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SYFNNDFIFVRPAISTDYLENAAPAARPTYRAYYPAQDGLAATLERIVTNFQLAPPFEDL HHCCCCEEEEECCCCHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCHHHH RRDTACLMQAIDDEFGPFSEAFNFQIHVLSSPFFRNQAAYLVGRIVNGERVLPFAVPVRH HHHHHHHHHHHHHCCCCHHHHCCEEEEEECCCCHHCHHHHHHHEEECCCEEEEEECCHHH VGGGKLALDTVLLRREQLQVLFGFAHSYFLVDMDVPSAYVAFLGSIMPGKPKAEIYTALG CCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHC LQKQGKNLFYRDLLHHLSHSSDRFVIAPGIKGLVMLVFTLPSFPYVFKAIKDRFPPPKDT CHHCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC TREQIMEKYQLVKRHDRLGRMADTLEYSSVALPLARLDEALLRELEKEAPSLLEYDGDSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHH VIRHLYIERRMTPLNLYLQHGSDAEVEHGVQEYGDAIKELIQANIFPGDMLYKNFGVTRH HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC GRVVFYDYDEIEYLTDCQVRRVPPPRHEDDELASEPWYSVGPRDIFPETYGPFLLGDPRV CEEEEEECCHHHHHHCCCEECCCCCCCCCHHHHCCCCCCCCCHHCCCCCCCCCCCCCHHH RKAFLARHPDFFDPALWQDSQDRLRRGELPEFFPYAASLRFRTRYPERFAGHGAAPAAPR HHHHHHCCCCCCCHHHCCCCHHHHHCCCCCCHHHHHHHEEHHCCCCHHHCCCCCCCCCCC AA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA