| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028756
Identifier: 238028756
GI number: 238028756
Start: 3655898
End: 3656761
Strand: Reverse
Name: 238028756
Synonym: bglu_1g32200
Alternate gene names: NA
Gene position: 3656761-3655898 (Counterclockwise)
Preceding gene: 238028757
Following gene: 238028755
Centisome position: 93.61
GC content: 64.58
Gene sequence:
>864_bases ATGCTTTATCCGGAACTCTACAAATCGCTCGAAGCCGTCCGTTGGGACATGGAGAAGGACATCCCTTGGGACAAGTTCGA CGCGTCGCTGCTGACGGACGAACAGGCGACGACGATCAAGATGAACGCGATCACCGAGTGGTCGGCGTTGCCCGCGACGG AGATGTTCCTGCGCGACAACCACCACGACAGCGATTTCTCGGCGTTCATGAGCGTCTGGTTCTTCGAGGAGCAGAAGCAT TCGCTGGTCCTGATGGAATACCTGCGCCGCTTCAAGCCGGAGATGATGCCGACCGAGGAGGAGTTGCACGCGGTGCGCTT CGAGTTCGATCCGGCGCCGCCGCTCGAGACGCTGATGCTGCACTTCTGCGGCGAGATCCGCCTGAACCACTGGTATCGCC GTGCCGCCGAGTGGCATACCGAGCCCGTCATCAAGCACATCTACGAGACGATCTCACGCGACGAGGCCCGCCACGGCGGC GCCTACCTGCGCTATATGAAGAAGGCGCTCGTCAACTGCGGCGACGCCGCGCGCTCGGCGTTCGCGAAGATCGGCGTGCT GATGGCCTCGGCGCGCCGCACCGAGAAGCCGCTGCACCCGACCAACCTGCACGTGAACCAGGCGCTGTTCCCGCGCGACA CCGTGCAGTCGCGGCTGCCCGATCCCGAGTGGCTCGAGCGCTGGCTCGACGAGCAGATCCGCTTCGACGGCGAGTGGGAG AAGAAGGTCGTCGACCGCATCCTGCACAACCTGTCGATCCTGTTCGAGCGCACCTTCGCGACCGCCCAGGAACTGAACCG CTACCGCAAGGAAGTGACGACGCGGCTGCAGGCGCAGGAGGGCGGTGCGGCCCAGCCCGCCTGA
Upstream 100 bases:
>100_bases TTACTGGTTCGTCAGGTCGGCGCCCTTATTGTGGGCGTTCGACGCAACAGTCACGTTTAGCAGTCGCAATGCGCAGAACA GGGGTGGGACCATGAACACC
Downstream 100 bases:
>100_bases CACGGCGCGCTGCCGTGACGCCAGCCCGCCGACGTTCAGCGGGCTTTTTTTTATGGCGCGCCGGCGCGCGCGCTGTGCCG CCGCCGCGCCGCCATGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MLYPELYKSLEAVRWDMEKDIPWDKFDASLLTDEQATTIKMNAITEWSALPATEMFLRDNHHDSDFSAFMSVWFFEEQKH SLVLMEYLRRFKPEMMPTEEELHAVRFEFDPAPPLETLMLHFCGEIRLNHWYRRAAEWHTEPVIKHIYETISRDEARHGG AYLRYMKKALVNCGDAARSAFAKIGVLMASARRTEKPLHPTNLHVNQALFPRDTVQSRLPDPEWLERWLDEQIRFDGEWE KKVVDRILHNLSILFERTFATAQELNRYRKEVTTRLQAQEGGAAQPA
Sequences:
>Translated_287_residues MLYPELYKSLEAVRWDMEKDIPWDKFDASLLTDEQATTIKMNAITEWSALPATEMFLRDNHHDSDFSAFMSVWFFEEQKH SLVLMEYLRRFKPEMMPTEEELHAVRFEFDPAPPLETLMLHFCGEIRLNHWYRRAAEWHTEPVIKHIYETISRDEARHGG AYLRYMKKALVNCGDAARSAFAKIGVLMASARRTEKPLHPTNLHVNQALFPRDTVQSRLPDPEWLERWLDEQIRFDGEWE KKVVDRILHNLSILFERTFATAQELNRYRKEVTTRLQAQEGGAAQPA >Mature_287_residues MLYPELYKSLEAVRWDMEKDIPWDKFDASLLTDEQATTIKMNAITEWSALPATEMFLRDNHHDSDFSAFMSVWFFEEQKH SLVLMEYLRRFKPEMMPTEEELHAVRFEFDPAPPLETLMLHFCGEIRLNHWYRRAAEWHTEPVIKHIYETISRDEARHGG AYLRYMKKALVNCGDAARSAFAKIGVLMASARRTEKPLHPTNLHVNQALFPRDTVQSRLPDPEWLERWLDEQIRFDGEWE KKVVDRILHNLSILFERTFATAQELNRYRKEVTTRLQAQEGGAAQPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33881; Mature: 33881
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYPELYKSLEAVRWDMEKDIPWDKFDASLLTDEQATTIKMNAITEWSALPATEMFLRDN CCCHHHHHHHHHHHHHHHCCCCCCHHCHHHHCCCCCCEEEEECHHCCCCCCHHHHHHHCC HHDSDFSAFMSVWFFEEQKHSLVLMEYLRRFKPEMMPTEEELHAVRFEFDPAPPLETLML CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEECCCCCCHHHHHH HFCGEIRLNHWYRRAAEWHTEPVIKHIYETISRDEARHGGAYLRYMKKALVNCGDAARSA HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHH FAKIGVLMASARRTEKPLHPTNLHVNQALFPRDTVQSRLPDPEWLERWLDEQIRFDGEWE HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHH KKVVDRILHNLSILFERTFATAQELNRYRKEVTTRLQAQEGGAAQPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLYPELYKSLEAVRWDMEKDIPWDKFDASLLTDEQATTIKMNAITEWSALPATEMFLRDN CCCHHHHHHHHHHHHHHHCCCCCCHHCHHHHCCCCCCEEEEECHHCCCCCCHHHHHHHCC HHDSDFSAFMSVWFFEEQKHSLVLMEYLRRFKPEMMPTEEELHAVRFEFDPAPPLETLML CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEECCCCCCHHHHHH HFCGEIRLNHWYRRAAEWHTEPVIKHIYETISRDEARHGGAYLRYMKKALVNCGDAARSA HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHH FAKIGVLMASARRTEKPLHPTNLHVNQALFPRDTVQSRLPDPEWLERWLDEQIRFDGEWE HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHH KKVVDRILHNLSILFERTFATAQELNRYRKEVTTRLQAQEGGAAQPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA