| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is tauA [H]
Identifier: 238028738
GI number: 238028738
Start: 3638411
End: 3639445
Strand: Reverse
Name: tauA [H]
Synonym: bglu_1g32020
Alternate gene names: 238028738
Gene position: 3639445-3638411 (Counterclockwise)
Preceding gene: 238028739
Following gene: 238028737
Centisome position: 93.16
GC content: 72.75
Gene sequence:
>1035_bases ATGCCGCGTTTGAACCCCGCCCGCGCCGCCGCCGCGCTCGCCACCGCCCTTGCCACCCTTGCCGCCACCGTGCTGCCGTC CGCGGCGCGCGCGGCCGACAGGGAGGTGGTGATCGCCTACCAGGACATGGTCGTGCCGTGGCGCTACGCGCAGGCCACCG GCGAAGTCGAGAAGGCGACCGGCTACCACGTCACGTTCCGCAAGCTCGGCAGCGGCGCCGACGTGATCCGCGCGCTCGCC TCCGGCTCGGTGCAGCTGGGCGAGGCGGGTTCGAGCCCGATCGCGGCCGGCCTCTCGCAGGGCGTGGACATCGCGTTGTT CTGGATTCTCGACGACATCAACGACGCCGAGGCGCTGGTCGCGCGCAACGGTTCGGGCGTGACCAGCGTGGCCGGGCTGA AGGGCCGCCGGATCGGCGTGCCGTTCGTCTCCACCTCGCATTTCCACACGCTGGTGGCGCTGCAGCAGGCGGGCGTGAAC CCGAACGACGTGCGGATCGTCAACCTGCGCCCGCCCGAAGTGGCGGCGGCCTGGGCGCGCGGCGACATCGACGCGACCTA CATCTGGGACCCGGTGCTCGCGAAGGTCAAGCAAAGCGGCACGGTGCTGACCACCTCGGGGCGGGTCGCCAAGGCGAGCG GCAAGGCCACCTTCGACGGCTTCGTGGTCGCGCGCGGCTTCGCGAACGCGCATCCCGAGTTCGTCACGCGCTTCGTGAAG GTGCTGGCGGCGGCCGACGCCGACTATCGCGCCCATCCGGCCGCCTGGGGCAAGGGCTCGGCGCAGGCCGCGGCGATCGC GCAGGAGTCGGGCGCGAACCCCGGCGACGTGCCGGCGAGCCTCGCGCTCTATGCGTTTCCGTCGCTCGCCGAGCAGGCGT CGGCCACCTGGCTGGGCGGGGGCGCGCAAGCGGGCGCGGCGAGGTCGCTGGCCGCCACGGCGGCGTTTCTGAAGACGCAG GGCACGATCCAGACGGTGCTGCCCGATTATTCGGTCGGCGTCGATCCGCGCTTCGTGAAGGCGGCCGCGCGATGA
Upstream 100 bases:
>100_bases CGGCAGCGTCAATTGCATCGCAGGAATCGTTAGAACCGCAGGCGTGCCAAGGCCTCTATAGTCGGGCGCTTTCGTGCCGC TTCCCGACCCGAGGACCGCC
Downstream 100 bases:
>100_bases GCCTGCTCGAGATCCGGCAGCTGTCGGTGGCCTATCCCGGCGAGCGCGGGCGCGACGGCACGCAGGCCCTGGCCGGGGTC GACCTGTCGATCGAGGCCGG
Product: taurine transport system, periplasmic component
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: Sulfate starvation-induced protein 1; SSI1 [H]
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MPRLNPARAAAALATALATLAATVLPSAARAADREVVIAYQDMVVPWRYAQATGEVEKATGYHVTFRKLGSGADVIRALA SGSVQLGEAGSSPIAAGLSQGVDIALFWILDDINDAEALVARNGSGVTSVAGLKGRRIGVPFVSTSHFHTLVALQQAGVN PNDVRIVNLRPPEVAAAWARGDIDATYIWDPVLAKVKQSGTVLTTSGRVAKASGKATFDGFVVARGFANAHPEFVTRFVK VLAAADADYRAHPAAWGKGSAQAAAIAQESGANPGDVPASLALYAFPSLAEQASATWLGGGAQAGAARSLAATAAFLKTQ GTIQTVLPDYSVGVDPRFVKAAAR
Sequences:
>Translated_344_residues MPRLNPARAAAALATALATLAATVLPSAARAADREVVIAYQDMVVPWRYAQATGEVEKATGYHVTFRKLGSGADVIRALA SGSVQLGEAGSSPIAAGLSQGVDIALFWILDDINDAEALVARNGSGVTSVAGLKGRRIGVPFVSTSHFHTLVALQQAGVN PNDVRIVNLRPPEVAAAWARGDIDATYIWDPVLAKVKQSGTVLTTSGRVAKASGKATFDGFVVARGFANAHPEFVTRFVK VLAAADADYRAHPAAWGKGSAQAAAIAQESGANPGDVPASLALYAFPSLAEQASATWLGGGAQAGAARSLAATAAFLKTQ GTIQTVLPDYSVGVDPRFVKAAAR >Mature_343_residues PRLNPARAAAALATALATLAATVLPSAARAADREVVIAYQDMVVPWRYAQATGEVEKATGYHVTFRKLGSGADVIRALAS GSVQLGEAGSSPIAAGLSQGVDIALFWILDDINDAEALVARNGSGVTSVAGLKGRRIGVPFVSTSHFHTLVALQQAGVNP NDVRIVNLRPPEVAAAWARGDIDATYIWDPVLAKVKQSGTVLTTSGRVAKASGKATFDGFVVARGFANAHPEFVTRFVKV LAAADADYRAHPAAWGKGSAQAAAIAQESGANPGDVPASLALYAFPSLAEQASATWLGGGAQAGAARSLAATAAFLKTQG TIQTVLPDYSVGVDPRFVKAAAR
Specific function: Part of a binding-protein-dependent transport system for taurine [H]
COG id: COG4521
COG function: function code P; ABC-type taurine transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081727, Length=322, Percent_Identity=39.7515527950311, Blast_Score=207, Evalue=8e-55, Organism=Escherichia coli, GI87081803, Length=235, Percent_Identity=26.8085106382979, Blast_Score=76, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007210 - InterPro: IPR001638 - InterPro: IPR010068 [H]
Pfam domain/function: PF04069 OpuAC [H]
EC number: NA
Molecular weight: Translated: 35352; Mature: 35221
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLNPARAAAALATALATLAATVLPSAARAADREVVIAYQDMVVPWRYAQATGEVEKAT CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEEECEECCEEHHHCCCCHHHCC GYHVTFRKLGSGADVIRALASGSVQLGEAGSSPIAAGLSQGVDIALFWILDDINDAEALV CCEEEEECCCCCHHHHHHHHCCCEEECCCCCCCHHHHHHCCCCEEEEEEEECCCCCHHHE ARNGSGVTSVAGLKGRRIGVPFVSTSHFHTLVALQQAGVNPNDVRIVNLRPPEVAAAWAR ECCCCCCEEECCCCCCEECCCEECCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHC GDIDATYIWDPVLAKVKQSGTVLTTSGRVAKASGKATFDGFVVARGFANAHPEFVTRFVK CCCCEEEEHHHHHHHHHCCCCEEEECCCEEECCCCCCCCCEEEECCCCCCCHHHHHHHHH VLAAADADYRAHPAAWGKGSAQAAAIAQESGANPGDVPASLALYAFPSLAEQASATWLGG HHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEECC GAQAGAARSLAATAAFLKTQGTIQTVLPDYSVGVDPRFVKAAAR CCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHCCC >Mature Secondary Structure PRLNPARAAAALATALATLAATVLPSAARAADREVVIAYQDMVVPWRYAQATGEVEKAT CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEEECEECCEEHHHCCCCHHHCC GYHVTFRKLGSGADVIRALASGSVQLGEAGSSPIAAGLSQGVDIALFWILDDINDAEALV CCEEEEECCCCCHHHHHHHHCCCEEECCCCCCCHHHHHHCCCCEEEEEEEECCCCCHHHE ARNGSGVTSVAGLKGRRIGVPFVSTSHFHTLVALQQAGVNPNDVRIVNLRPPEVAAAWAR ECCCCCCEEECCCCCCEECCCEECCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHC GDIDATYIWDPVLAKVKQSGTVLTTSGRVAKASGKATFDGFVVARGFANAHPEFVTRFVK CCCCEEEEHHHHHHHHHCCCCEEEECCCEEECCCCCCCCCEEEECCCCCCCHHHHHHHHH VLAAADADYRAHPAAWGKGSAQAAAIAQESGANPGDVPASLALYAFPSLAEQASATWLGG HHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEECC GAQAGAARSLAATAAFLKTQGTIQTVLPDYSVGVDPRFVKAAAR CCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 8774726 [H]