| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028727
Identifier: 238028727
GI number: 238028727
Start: 3624043
End: 3624651
Strand: Reverse
Name: 238028727
Synonym: bglu_1g31910
Alternate gene names: NA
Gene position: 3624651-3624043 (Counterclockwise)
Preceding gene: 238028729
Following gene: 339905979
Centisome position: 92.78
GC content: 76.03
Gene sequence:
>609_bases ATGTCCATCCCTGATTTCCGTGCGCCGGCGGCCGCACGGCGCTTCCCGCGCGGCGCGGCCGCCTTGCTGGCACGCGCCCG CGCCTGCCTGTTGTTGGCGGTGGCGGCGGCTGCCGCCGTCGGCTGCTCGCCCGCGCTCGACTGGCGCACGCTGCATAGCG ACGCCGGCTACACGATCGATCTGCCGGCACGGCCCACCGTCGATGCGCGCACGGTCGAGATCGGCGGCGCGCCGCTGACG ATGCGGATGCAGGCCGCGCACGTGGCCGGCGCCGTGTTCGCGGTCGGTACGGTGACGCTGCCGCAGCCGAGCGAGGCCGG CCGCCGGGCGGTGCTCGAGGCGCTGCGCGCCGCGCTGGCGCGCAATCTGCGCGCGCAGCCGGTGGTGCGCGAGGTCGCGG TGCCGCTCGCGGCGGGCGGCAGCACGCCCGGCGTGGAGCTGACGATCCGCGGCGGGCCGGCCGGCTCCTCGCAGGCGACA GCCGGCAAGACGATGGTGGCGCGGCTCGTCGCGCGCGGCGCGCATGTCTATCAGGCGGTGGCGATCGCCGATACCCCGCT GCCGGCGGAGGCGCTCGACCAGTTCCTCGGTTCGTTGAAGCTGGATTGA
Upstream 100 bases:
>100_bases TGTCGCCTGCCGCGCCCGTGTGGCGGCGAGGCGTGTGCCTTCTCGCGGGTTTCCGTTGCGCTCGTTGCGTGCGGCCACGG CCGCCGCTGGTTGATCCGAC
Downstream 100 bases:
>100_bases ACCCCCGTGGCCGCGCGCCGCCGTCGGAAAGGCGGCGGATTGCTGCACGGCGAGGCGCGAGGACAGCCGCGGGCGCGCCC CGGAAAAGCCGCTAGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MSIPDFRAPAAARRFPRGAAALLARARACLLLAVAAAAAVGCSPALDWRTLHSDAGYTIDLPARPTVDARTVEIGGAPLT MRMQAAHVAGAVFAVGTVTLPQPSEAGRRAVLEALRAALARNLRAQPVVREVAVPLAAGGSTPGVELTIRGGPAGSSQAT AGKTMVARLVARGAHVYQAVAIADTPLPAEALDQFLGSLKLD
Sequences:
>Translated_202_residues MSIPDFRAPAAARRFPRGAAALLARARACLLLAVAAAAAVGCSPALDWRTLHSDAGYTIDLPARPTVDARTVEIGGAPLT MRMQAAHVAGAVFAVGTVTLPQPSEAGRRAVLEALRAALARNLRAQPVVREVAVPLAAGGSTPGVELTIRGGPAGSSQAT AGKTMVARLVARGAHVYQAVAIADTPLPAEALDQFLGSLKLD >Mature_201_residues SIPDFRAPAAARRFPRGAAALLARARACLLLAVAAAAAVGCSPALDWRTLHSDAGYTIDLPARPTVDARTVEIGGAPLTM RMQAAHVAGAVFAVGTVTLPQPSEAGRRAVLEALRAALARNLRAQPVVREVAVPLAAGGSTPGVELTIRGGPAGSSQATA GKTMVARLVARGAHVYQAVAIADTPLPAEALDQFLGSLKLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20581; Mature: 20450
Theoretical pI: Translated: 11.14; Mature: 11.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPDFRAPAAARRFPRGAAALLARARACLLLAVAAAAAVGCSPALDWRTLHSDAGYTID CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCEEE LPARPTVDARTVEIGGAPLTMRMQAAHVAGAVFAVGTVTLPQPSEAGRRAVLEALRAALA CCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHH RNLRAQPVVREVAVPLAAGGSTPGVELTIRGGPAGSSQATAGKTMVARLVARGAHVYQAV HCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHE AIADTPLPAEALDQFLGSLKLD EECCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure SIPDFRAPAAARRFPRGAAALLARARACLLLAVAAAAAVGCSPALDWRTLHSDAGYTID CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCEEE LPARPTVDARTVEIGGAPLTMRMQAAHVAGAVFAVGTVTLPQPSEAGRRAVLEALRAALA CCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHH RNLRAQPVVREVAVPLAAGGSTPGVELTIRGGPAGSSQATAGKTMVARLVARGAHVYQAV HCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHE AIADTPLPAEALDQFLGSLKLD EECCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA