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The map label for this gene is ctaD [H]

Identifier: 238028704

GI number: 238028704

Start: 3600115

End: 3601722

Strand: Reverse

Name: ctaD [H]

Synonym: bglu_1g31680

Alternate gene names: 238028704

Gene position: 3601722-3600115 (Counterclockwise)

Preceding gene: 238028705

Following gene: 238028703

Centisome position: 92.2

GC content: 64.55

Gene sequence:

>1608_bases
ATGTCTAGCATAGGACACGACGTAACCGCGGGACACGCGCACGACGATCATGCGCACGAGCTACCGCACGGCTGGCGCCG
CTGGCTGTTCGCGACCAATCACAAGGACATCGGCACGCTGTACCTGCTGTTCTCGTTCGTGATGTTCCTGTCGGGCGGCG
TGATGGCGCTCGGCATTCGCGCCGAGCTGTTCGAGCCGGGCCTGCAGATCATGCGTCCCGAGTTCTTCAACCAGCTCACC
ACGATGCACGGCCTGATCATGGTGTTCGGCGCGATCATGCCGGCCTTCGTCGGCTTCGCGAACTGGATGGTGCCGCTGCA
GATCGGGGCCTCGGACATGGCGTTCGCGCGCATGAACAACTTCAGCTTCTGGCTGCTGCCGGTGGCGGCGGTGCTGCTGG
TGGGCTCGTTCTTCGCGCCGGGCGGCGCGACCGCGGCGGGCTGGACGCTGTACGCGCCGCTTTCCACGCAGATGGGGCCG
GGCATGGACTTTGCGATCTTCGCGGTCCACCTGATGGGCGCCTCGTCGATCATGGGCGGCATCAATATCGTCGTGACGAT
CCTGAACATGCGCGCGCCGGGCATGACGCTCATGAAGATGCCGATGTTCGCGTGGACCTGGCTGATCACCGCCTACCTGC
TGATCGCGGTGATGCCGGTGCTGGCCGGCGCCATCACGATGGTGCTGTTCGACCGCCATTTCGGCACCTCGTTCTTCAAC
GCGGCGGGCGGCGGCGACCCGGTGATGTATCAGCACATCTTCTGGTTCTTCGGCCATCCCGAGGTCTACATCATGATCCT
GCCCGCGTTCGGGATCGTCTCGCAGGTGATACCGGCGTTCTCGCGCAAGCCGCTGTTCGGCTACAGCTCGATGGTGTACG
CCACCGCGTCGATCGCGATCCTCTCGTTCATGGTCTGGGCGCACCACATGTTCGCCACCGGCATGCCCGTCACGGGTCAG
CTGTTCTTCATGTACGCGACCATGCTGATCGCGGTGCCGACCGGCGTGAAGGTGTTCAACTGGGTCGCCACCATGTGGCG
CGGCTCGCTCAGCTTCGAGACGCCGATGCTGTTCGCGATCGGCTTCCTGTTCGTGTTCACGTTCGGCGGGCTGACCGGGC
TGATGCTGGCGATGGCGCCGCTCGACATCCAGTACCACGGCACCTACTTCGTGGTGGCGCACTTCCACTACGTGCTGGTG
GCGGGCTCGCTGTTCGGGCTGTTCTCGGGCTGGTACTACTGGTCGCCGAAATGGACCGGCTGGATGTACAACGAGATGCG
CGGCAAGATCCATTTCTGGGCGTCGATGATCTTCTTCAACATCACGTTCTTCCCGATGCACTTCGTCGGTCTGGCCGGCA
TGCCGCGCCGCTATGCCGACTATCCGGCGCAGTTCACCGACTTCAACCAGGTCGCGACGATCGGCGCGTTCGGCTTCGGC
CTCGCGCAGGTCTACTTCCTGTTCGCGGTGGCGCTGCCGGCCTATCGCGGCGGCGGCGGGCTCGAGAAGGCACCCGACAA
GCCATGGGACGGCGCGATCGGCCTCGAGTGGACGGTGCCGAGCCCGGCGCCGTTCCATACCTTCGAGCATCCGCCGACCG
TCGACTGA

Upstream 100 bases:

>100_bases
GGATGCCGGGCAGGCGCGCCGTGTCGAAATCGGCCCGGCTGCCTGACGTGTCGTTCGTCGTCTAGGTCGACGTCATCGGA
ACGAGGATTAGGAGACATCC

Downstream 100 bases:

>100_bases
CTCACTGCGCGCTGGCCGCCCGGCCCGGGCGGCGGCGCACCAACCCGTCCGAGCCGATGAGCCGCCACCGTTCACAAGCA
CGCACGCCCGCGCAGATCCG

Product: Heme/copper-type cytochrome/quinol oxidase subunit 1

Products: NA

Alternate protein names: Cytochrome aa3 subunit 1; Cytochrome c oxidase polypeptide I [H]

Number of amino acids: Translated: 535; Mature: 534

Protein sequence:

>535_residues
MSSIGHDVTAGHAHDDHAHELPHGWRRWLFATNHKDIGTLYLLFSFVMFLSGGVMALGIRAELFEPGLQIMRPEFFNQLT
TMHGLIMVFGAIMPAFVGFANWMVPLQIGASDMAFARMNNFSFWLLPVAAVLLVGSFFAPGGATAAGWTLYAPLSTQMGP
GMDFAIFAVHLMGASSIMGGINIVVTILNMRAPGMTLMKMPMFAWTWLITAYLLIAVMPVLAGAITMVLFDRHFGTSFFN
AAGGGDPVMYQHIFWFFGHPEVYIMILPAFGIVSQVIPAFSRKPLFGYSSMVYATASIAILSFMVWAHHMFATGMPVTGQ
LFFMYATMLIAVPTGVKVFNWVATMWRGSLSFETPMLFAIGFLFVFTFGGLTGLMLAMAPLDIQYHGTYFVVAHFHYVLV
AGSLFGLFSGWYYWSPKWTGWMYNEMRGKIHFWASMIFFNITFFPMHFVGLAGMPRRYADYPAQFTDFNQVATIGAFGFG
LAQVYFLFAVALPAYRGGGGLEKAPDKPWDGAIGLEWTVPSPAPFHTFEHPPTVD

Sequences:

>Translated_535_residues
MSSIGHDVTAGHAHDDHAHELPHGWRRWLFATNHKDIGTLYLLFSFVMFLSGGVMALGIRAELFEPGLQIMRPEFFNQLT
TMHGLIMVFGAIMPAFVGFANWMVPLQIGASDMAFARMNNFSFWLLPVAAVLLVGSFFAPGGATAAGWTLYAPLSTQMGP
GMDFAIFAVHLMGASSIMGGINIVVTILNMRAPGMTLMKMPMFAWTWLITAYLLIAVMPVLAGAITMVLFDRHFGTSFFN
AAGGGDPVMYQHIFWFFGHPEVYIMILPAFGIVSQVIPAFSRKPLFGYSSMVYATASIAILSFMVWAHHMFATGMPVTGQ
LFFMYATMLIAVPTGVKVFNWVATMWRGSLSFETPMLFAIGFLFVFTFGGLTGLMLAMAPLDIQYHGTYFVVAHFHYVLV
AGSLFGLFSGWYYWSPKWTGWMYNEMRGKIHFWASMIFFNITFFPMHFVGLAGMPRRYADYPAQFTDFNQVATIGAFGFG
LAQVYFLFAVALPAYRGGGGLEKAPDKPWDGAIGLEWTVPSPAPFHTFEHPPTVD
>Mature_534_residues
SSIGHDVTAGHAHDDHAHELPHGWRRWLFATNHKDIGTLYLLFSFVMFLSGGVMALGIRAELFEPGLQIMRPEFFNQLTT
MHGLIMVFGAIMPAFVGFANWMVPLQIGASDMAFARMNNFSFWLLPVAAVLLVGSFFAPGGATAAGWTLYAPLSTQMGPG
MDFAIFAVHLMGASSIMGGINIVVTILNMRAPGMTLMKMPMFAWTWLITAYLLIAVMPVLAGAITMVLFDRHFGTSFFNA
AGGGDPVMYQHIFWFFGHPEVYIMILPAFGIVSQVIPAFSRKPLFGYSSMVYATASIAILSFMVWAHHMFATGMPVTGQL
FFMYATMLIAVPTGVKVFNWVATMWRGSLSFETPMLFAIGFLFVFTFGGLTGLMLAMAPLDIQYHGTYFVVAHFHYVLVA
GSLFGLFSGWYYWSPKWTGWMYNEMRGKIHFWASMIFFNITFFPMHFVGLAGMPRRYADYPAQFTDFNQVATIGAFGFGL
AQVYFLFAVALPAYRGGGGLEKAPDKPWDGAIGLEWTVPSPAPFHTFEHPPTVD

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG0843

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

Organism=Homo sapiens, GI251831109, Length=511, Percent_Identity=48.7279843444227, Blast_Score=450, Evalue=1e-126,
Organism=Escherichia coli, GI1786634, Length=517, Percent_Identity=41.1992263056093, Blast_Score=377, Evalue=1e-105,
Organism=Saccharomyces cerevisiae, GI6226519, Length=529, Percent_Identity=48.2041587901701, Blast_Score=489, Evalue=1e-139,
Organism=Saccharomyces cerevisiae, GI6226524, Length=323, Percent_Identity=50.7739938080495, Blast_Score=332, Evalue=1e-91,
Organism=Saccharomyces cerevisiae, GI6226523, Length=247, Percent_Identity=47.3684210526316, Blast_Score=216, Evalue=8e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000883
- InterPro:   IPR014241 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 59370; Mature: 59238

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSIGHDVTAGHAHDDHAHELPHGWRRWLFATNHKDIGTLYLLFSFVMFLSGGVMALGIR
CCCCCCCCCCCCCCCCCHHHCCHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCEEEEEHH
AELFEPGLQIMRPEFFNQLTTMHGLIMVFGAIMPAFVGFANWMVPLQIGASDMAFARMNN
HHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHCC
FSFWLLPVAAVLLVGSFFAPGGATAAGWTLYAPLSTQMGPGMDFAIFAVHLMGASSIMGG
CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC
INIVVTILNMRAPGMTLMKMPMFAWTWLITAYLLIAVMPVLAGAITMVLFDRHFGTSFFN
HHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHC
AAGGGDPVMYQHIFWFFGHPEVYIMILPAFGIVSQVIPAFSRKPLFGYSSMVYATASIAI
CCCCCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LSFMVWAHHMFATGMPVTGQLFFMYATMLIAVPTGVKVFNWVATMWRGSLSFETPMLFAI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHH
GFLFVFTFGGLTGLMLAMAPLDIQYHGTYFVVAHFHYVLVAGSLFGLFSGWYYWSPKWTG
HHHHHHHHHHHHHHHHHHCCCCEEECCCEEEHHHHHHHHHHHHHHHHHCCEEEECCCCCC
WMYNEMRGKIHFWASMIFFNITFFPMHFVGLAGMPRRYADYPAQFTDFNQVATIGAFGFG
EEHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHH
LAQVYFLFAVALPAYRGGGGLEKAPDKPWDGAIGLEWTVPSPAPFHTFEHPPTVD
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSIGHDVTAGHAHDDHAHELPHGWRRWLFATNHKDIGTLYLLFSFVMFLSGGVMALGIR
CCCCCCCCCCCCCCCCHHHCCHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCEEEEEHH
AELFEPGLQIMRPEFFNQLTTMHGLIMVFGAIMPAFVGFANWMVPLQIGASDMAFARMNN
HHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHCC
FSFWLLPVAAVLLVGSFFAPGGATAAGWTLYAPLSTQMGPGMDFAIFAVHLMGASSIMGG
CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC
INIVVTILNMRAPGMTLMKMPMFAWTWLITAYLLIAVMPVLAGAITMVLFDRHFGTSFFN
HHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHC
AAGGGDPVMYQHIFWFFGHPEVYIMILPAFGIVSQVIPAFSRKPLFGYSSMVYATASIAI
CCCCCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LSFMVWAHHMFATGMPVTGQLFFMYATMLIAVPTGVKVFNWVATMWRGSLSFETPMLFAI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHH
GFLFVFTFGGLTGLMLAMAPLDIQYHGTYFVVAHFHYVLVAGSLFGLFSGWYYWSPKWTG
HHHHHHHHHHHHHHHHHHCCCCEEECCCEEEHHHHHHHHHHHHHHHHHCCEEEECCCCCC
WMYNEMRGKIHFWASMIFFNITFFPMHFVGLAGMPRRYADYPAQFTDFNQVATIGAFGFG
EEHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHH
LAQVYFLFAVALPAYRGGGGLEKAPDKPWDGAIGLEWTVPSPAPFHTFEHPPTVD
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2172930; 1965217; 12597275 [H]