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The map label for this gene is ctaC [H]

Identifier: 238028705

GI number: 238028705

Start: 3601777

End: 3603444

Strand: Reverse

Name: ctaC [H]

Synonym: bglu_1g31690

Alternate gene names: 238028705

Gene position: 3603444-3601777 (Counterclockwise)

Preceding gene: 238028706

Following gene: 238028704

Centisome position: 92.24

GC content: 67.03

Gene sequence:

>1668_bases
ATGACAATTTTGGGTAAGGAAGCCATGAAAACAATCAAGCGCGCCCTCACTGGTTTGCTGGCCGTCAGCGGACTCATCGC
GTCCGGTGCCGCATTGGCCGTCGGCGACAGCCCGGGCGGCCCCCGCGTCAACGAAATCAATCTCCAGCCGCCCGTCACCA
AGATCGCGCAGGAACTGTACGACCTGCACACCATGATGCTGATCCTCTGCACGGTGATCTTCGTCGGCGTGTTCGGGGTG
ATGTTCTATTCGGTGTTCGCCCATCGCAAATCACGCGGCCACAAGGCCGCGAATTTTCATGAAAGCACCACCGTCGAAAT
TATCTGGACGATTGTGCCGTTCGTGATCGTGGTGCTGATGGCGCTGCCGGCCACCAAGGCGGTGGTCGCGATGAAGGACA
CCACCAACGCGGACGTCACGATCAAGGTCACCGGCTATCAATGGAAGTGGGGCTACGACTACGTGAAGGGGCCGGGCGAG
GGCATCAGCTTCGTCTCCACGCTCACCACGCCGCGCAGCGAAGTGAACGGCCAGCAGCCGATCAGCGAAACCTATCTGCA
GGAAGTCGACCACCCGCTGGTGGTGCCCGTCGATAAAAAGATCCGCATCATCACCACCGCCAACGACGTGGTTCATTCGT
GGTACGTGCCGGCCTTCGGCGTGAAACAGGATGCGATCCCGGGCTTCGTGCGCGACACCTGGTTCAAGGCCGACAAGGTG
GGCACCTACCGCGGTTTCTGCACCGAGCTGTGCGGCAAGGAGCATGCCTACATGCCGGTGGTGGTGCAGGTCCTGTCGGC
CGACGACTACGACAAATGGGTGAAGGACCAGAAGGCCAAGGCCGCCGCCGCCACGCTCGATCCGAACAAGGTATGGACCC
GCGCCGAGCTGATCGCGCACGGCGAGGACGTCTACAAGGCCAACTGCGCGGTCTGCCACCAGCCGAACGGCAAGGGGCTG
GGCGCGTTCCCGGCGCTCGACGGCAGCAAGATCGCCAACGGCCCGATCGCCCAGCATGTGAGCCTGGTGCTGAGCGGCAA
GGGCGCGATGCCGAGCTGGGCCTCGCTGTCGGATGTCGATCTGGCCTCGGTCGTCACCTACGAGCGCAATGCGTGGGGCA
ACCACATGGGCGACGCGCTGCAGCCGAAGCAGGTGGCCGACGCGCGCAACGGCAAGCTGCCCGAAGGCGGCGCGACGCAG
GCGGCGGCCCCGGCGGCCGCATCGGGTGCGTCCGCGCCGGCGGCGGAGGCCTCGGCGTCCGCGCCGGCCGCCGAGGCCTC
GGCGGCAGCGGCCGCATCGGGTGGCGACGCGTCGGGCACGTCGGCTGCGTCGGCGCCGGCTGCCGAGGCCGCCGCGCTGC
CGGCCGCCGTCTATTTCGATACCGGCAAGAGCGAATTGCCGGCCGACGCGAAGGCCGCGCTCGATGCCGCCGCGCGATAT
GCGAGCGCGCATCCGGACGCGAAGCTCGCGCTGTCGGGTTTCACGGATACGACGGGCTCGGCCGATGCCAACGCCGAACT
CGCGAAGCGTCGCGCGCAGGCGGTGCGCGACGCGCTGAAGGCGGCCGGCATCGCCGAGGACCGGATCGTGTTGAAGAAGC
CGCAGACGATCACGGGCGGAGCGGATGCCGGGCAGGCGCGCCGTGTCGAAATCGGCCCGGCTGCCTGA

Upstream 100 bases:

>100_bases
TATCGGCGCGCCCAGTTCGCTCATGAATTGCGTGCGTGGCTGATGCGCTGCGGCTGATCGAGGCGGCCGCGGCGTGGGGC
CGGCGGCGGGGAGGGTAGGA

Downstream 100 bases:

>100_bases
CGTGTCGTTCGTCGTCTAGGTCGACGTCATCGGAACGAGGATTAGGAGACATCCATGTCTAGCATAGGACACGACGTAAC
CGCGGGACACGCGCACGACG

Product: cytochrome c oxidase subunit II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]

Number of amino acids: Translated: 555; Mature: 554

Protein sequence:

>555_residues
MTILGKEAMKTIKRALTGLLAVSGLIASGAALAVGDSPGGPRVNEINLQPPVTKIAQELYDLHTMMLILCTVIFVGVFGV
MFYSVFAHRKSRGHKAANFHESTTVEIIWTIVPFVIVVLMALPATKAVVAMKDTTNADVTIKVTGYQWKWGYDYVKGPGE
GISFVSTLTTPRSEVNGQQPISETYLQEVDHPLVVPVDKKIRIITTANDVVHSWYVPAFGVKQDAIPGFVRDTWFKADKV
GTYRGFCTELCGKEHAYMPVVVQVLSADDYDKWVKDQKAKAAAATLDPNKVWTRAELIAHGEDVYKANCAVCHQPNGKGL
GAFPALDGSKIANGPIAQHVSLVLSGKGAMPSWASLSDVDLASVVTYERNAWGNHMGDALQPKQVADARNGKLPEGGATQ
AAAPAAASGASAPAAEASASAPAAEASAAAAASGGDASGTSAASAPAAEAAALPAAVYFDTGKSELPADAKAALDAAARY
ASAHPDAKLALSGFTDTTGSADANAELAKRRAQAVRDALKAAGIAEDRIVLKKPQTITGGADAGQARRVEIGPAA

Sequences:

>Translated_555_residues
MTILGKEAMKTIKRALTGLLAVSGLIASGAALAVGDSPGGPRVNEINLQPPVTKIAQELYDLHTMMLILCTVIFVGVFGV
MFYSVFAHRKSRGHKAANFHESTTVEIIWTIVPFVIVVLMALPATKAVVAMKDTTNADVTIKVTGYQWKWGYDYVKGPGE
GISFVSTLTTPRSEVNGQQPISETYLQEVDHPLVVPVDKKIRIITTANDVVHSWYVPAFGVKQDAIPGFVRDTWFKADKV
GTYRGFCTELCGKEHAYMPVVVQVLSADDYDKWVKDQKAKAAAATLDPNKVWTRAELIAHGEDVYKANCAVCHQPNGKGL
GAFPALDGSKIANGPIAQHVSLVLSGKGAMPSWASLSDVDLASVVTYERNAWGNHMGDALQPKQVADARNGKLPEGGATQ
AAAPAAASGASAPAAEASASAPAAEASAAAAASGGDASGTSAASAPAAEAAALPAAVYFDTGKSELPADAKAALDAAARY
ASAHPDAKLALSGFTDTTGSADANAELAKRRAQAVRDALKAAGIAEDRIVLKKPQTITGGADAGQARRVEIGPAA
>Mature_554_residues
TILGKEAMKTIKRALTGLLAVSGLIASGAALAVGDSPGGPRVNEINLQPPVTKIAQELYDLHTMMLILCTVIFVGVFGVM
FYSVFAHRKSRGHKAANFHESTTVEIIWTIVPFVIVVLMALPATKAVVAMKDTTNADVTIKVTGYQWKWGYDYVKGPGEG
ISFVSTLTTPRSEVNGQQPISETYLQEVDHPLVVPVDKKIRIITTANDVVHSWYVPAFGVKQDAIPGFVRDTWFKADKVG
TYRGFCTELCGKEHAYMPVVVQVLSADDYDKWVKDQKAKAAAATLDPNKVWTRAELIAHGEDVYKANCAVCHQPNGKGLG
AFPALDGSKIANGPIAQHVSLVLSGKGAMPSWASLSDVDLASVVTYERNAWGNHMGDALQPKQVADARNGKLPEGGATQA
AAPAAASGASAPAAEASASAPAAEASAAAAASGGDASGTSAASAPAAEAAALPAAVYFDTGKSELPADAKAALDAAARYA
SAHPDAKLALSGFTDTTGSADANAELAKRRAQAVRDALKAAGIAEDRIVLKKPQTITGGADAGQARRVEIGPAA

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Homo sapiens, GI251831110, Length=227, Percent_Identity=32.15859030837, Blast_Score=132, Evalue=6e-31,
Organism=Saccharomyces cerevisiae, GI6226540, Length=220, Percent_Identity=31.3636363636364, Blast_Score=126, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 57810; Mature: 57679

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS00078 COX2 ; PS50999 COX2_TM ; PS50857 COX2_CUA ; PS51007 CYTC ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILGKEAMKTIKRALTGLLAVSGLIASGAALAVGDSPGGPRVNEINLQPPVTKIAQELY
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEECCCCCHHHHHHHHH
DLHTMMLILCTVIFVGVFGVMFYSVFAHRKSRGHKAANFHESTTVEIIWTIVPFVIVVLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ALPATKAVVAMKDTTNADVTIKVTGYQWKWGYDYVKGPGEGISFVSTLTTPRSEVNGQQP
HCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCHHHCCCCCC
ISETYLQEVDHPLVVPVDKKIRIITTANDVVHSWYVPAFGVKQDAIPGFVRDTWFKADKV
HHHHHHHHCCCCEEEECCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC
GTYRGFCTELCGKEHAYMPVVVQVLSADDYDKWVKDQKAKAAAATLDPNKVWTRAELIAH
CCHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHC
GEDVYKANCAVCHQPNGKGLGAFPALDGSKIANGPIAQHVSLVLSGKGAMPSWASLSDVD
CCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCCCCCCCCCC
LASVVTYERNAWGNHMGDALQPKQVADARNGKLPEGGATQAAAPAAASGASAPAAEASAS
HHHHHEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APAAEASAAAAASGGDASGTSAASAPAAEAAALPAAVYFDTGKSELPADAKAALDAAARY
CCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHH
ASAHPDAKLALSGFTDTTGSADANAELAKRRAQAVRDALKAAGIAEDRIVLKKPQTITGG
HCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEECCC
ADAGQARRVEIGPAA
CCCCCCEEEECCCCC
>Mature Secondary Structure 
TILGKEAMKTIKRALTGLLAVSGLIASGAALAVGDSPGGPRVNEINLQPPVTKIAQELY
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEECCCCCHHHHHHHHH
DLHTMMLILCTVIFVGVFGVMFYSVFAHRKSRGHKAANFHESTTVEIIWTIVPFVIVVLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ALPATKAVVAMKDTTNADVTIKVTGYQWKWGYDYVKGPGEGISFVSTLTTPRSEVNGQQP
HCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCHHHCCCCCC
ISETYLQEVDHPLVVPVDKKIRIITTANDVVHSWYVPAFGVKQDAIPGFVRDTWFKADKV
HHHHHHHHCCCCEEEECCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC
GTYRGFCTELCGKEHAYMPVVVQVLSADDYDKWVKDQKAKAAAATLDPNKVWTRAELIAH
CCHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHC
GEDVYKANCAVCHQPNGKGLGAFPALDGSKIANGPIAQHVSLVLSGKGAMPSWASLSDVD
CCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCCCCCCCCCC
LASVVTYERNAWGNHMGDALQPKQVADARNGKLPEGGATQAAAPAAASGASAPAAEASAS
HHHHHEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APAAEASAAAAASGGDASGTSAASAPAAEAAALPAAVYFDTGKSELPADAKAALDAAARY
CCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHH
ASAHPDAKLALSGFTDTTGSADANAELAKRRAQAVRDALKAAGIAEDRIVLKKPQTITGG
HCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEECCC
ADAGQARRVEIGPAA
CCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1648008 [H]