| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is ctaE [H]
Identifier: 238028700
GI number: 238028700
Start: 3598082
End: 3598942
Strand: Reverse
Name: ctaE [H]
Synonym: bglu_1g31640
Alternate gene names: 238028700
Gene position: 3598942-3598082 (Counterclockwise)
Preceding gene: 238028701
Following gene: 238028698
Centisome position: 92.13
GC content: 65.51
Gene sequence:
>861_bases ATGAGCGGCCAACACGAAAGCCCTTACTATTTCATCCCGCATCCGTCGCGGCACCCGATCAATGCGGCGCTCGGCCTGCT CGTCATGCTCGGCTCGGCGGCGCTGTGGATCAACGGCCATGCCTGGGCGCCGATCACCGTCACGCTCGGCCTGCTGTGGC TGCTGTTCGTGCTCTATCACTGGTTCGGCGACGCGATCTCCGAATCGGAGGGCGGCATGTACGGCCAGCGCGTCGACAAG TCGTACCGCTGGAGCATGAGCTGGTTCATCTTCTCCGAGGTGATGTTCTTCGGCGCGTTCTTCGGCGCGCTGTTCTACGC GCGCGAGATCGCGCTGCACCAGCTCGGCAGCCTCGACTACCGGCTGATCTGGCCGGACTTCAGCGCCGTCTGGCCGAATG AGGGGCCGGCCGCGCTGGCGGGCCACTTCCGCACCATGGGCCCGTGGCCGGTGCCGACCATCAACACCGCGCTGCTGCTG AGCTCGGGCGCGACGCTGACGGTCTCGCACCATGCGCTGCGCGAGAACCACCGGCGCAAGGCGATCGTCTGGCTGGCGGC CACCATCGTGCTCGGCGTGAGCTTCCTGTTCCTGCAGGGCTTCGAGTATTTCCATGCGTACAACGAACTGAACCTGACGC TCGCCTCGGGCGTGTACGGCTCGACCTTCTTCCTGCTGACAGGTTTCCACGGCTTCCACGTGTTCCTCGGCGGCACGATG CTGACCGTGGTGCTGGTGCGGATGCTGCGCGGGCACTTCAAGCCCGATCACCATTTCGCGTTCGAGGGCGCGGCCTGGTA CTGGCACTTCGTGGACGTGGTGTGGCTGGGCCTGTACGTGGTGGTGTACTGGCTGTCGTAG
Upstream 100 bases:
>100_bases GCGCGCGAGGGGCGCGGCCGCGGTTTAGGCGCGAGGCGGCGCGCTCGCGGAAGCTTTCCGGAGCGCTCCGGAATCAACTG GACGAAGTGGAGAATCAAGC
Downstream 100 bases:
>100_bases CAGGCGCGCGCATGGCACGCGGTGCGCGTGCGGGGCGCGGCCTCGCCGGCCTCAGCGGCCGAGCGGGATGCCGGTCGAGT GGATCCAGCCCATCCAGTTC
Product: putative cytochrome c oxidase subunit III
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSGQHESPYYFIPHPSRHPINAALGLLVMLGSAALWINGHAWAPITVTLGLLWLLFVLYHWFGDAISESEGGMYGQRVDK SYRWSMSWFIFSEVMFFGAFFGALFYAREIALHQLGSLDYRLIWPDFSAVWPNEGPAALAGHFRTMGPWPVPTINTALLL SSGATLTVSHHALRENHRRKAIVWLAATIVLGVSFLFLQGFEYFHAYNELNLTLASGVYGSTFFLLTGFHGFHVFLGGTM LTVVLVRMLRGHFKPDHHFAFEGAAWYWHFVDVVWLGLYVVVYWLS
Sequences:
>Translated_286_residues MSGQHESPYYFIPHPSRHPINAALGLLVMLGSAALWINGHAWAPITVTLGLLWLLFVLYHWFGDAISESEGGMYGQRVDK SYRWSMSWFIFSEVMFFGAFFGALFYAREIALHQLGSLDYRLIWPDFSAVWPNEGPAALAGHFRTMGPWPVPTINTALLL SSGATLTVSHHALRENHRRKAIVWLAATIVLGVSFLFLQGFEYFHAYNELNLTLASGVYGSTFFLLTGFHGFHVFLGGTM LTVVLVRMLRGHFKPDHHFAFEGAAWYWHFVDVVWLGLYVVVYWLS >Mature_285_residues SGQHESPYYFIPHPSRHPINAALGLLVMLGSAALWINGHAWAPITVTLGLLWLLFVLYHWFGDAISESEGGMYGQRVDKS YRWSMSWFIFSEVMFFGAFFGALFYAREIALHQLGSLDYRLIWPDFSAVWPNEGPAALAGHFRTMGPWPVPTINTALLLS SGATLTVSHHALRENHRRKAIVWLAATIVLGVSFLFLQGFEYFHAYNELNLTLASGVYGSTFFLLTGFHGFHVFLGGTML TVVLVRMLRGHFKPDHHFAFEGAAWYWHFVDVVWLGLYVVVYWLS
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=281, Percent_Identity=41.2811387900356, Blast_Score=173, Evalue=2e-43, Organism=Escherichia coli, GI1786633, Length=136, Percent_Identity=31.6176470588235, Blast_Score=65, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6226542, Length=284, Percent_Identity=35.9154929577465, Blast_Score=116, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 32451; Mature: 32320
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGQHESPYYFIPHPSRHPINAALGLLVMLGSAALWINGHAWAPITVTLGLLWLLFVLYH CCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHH WFGDAISESEGGMYGQRVDKSYRWSMSWFIFSEVMFFGAFFGALFYAREIALHQLGSLDY HHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE RLIWPDFSAVWPNEGPAALAGHFRTMGPWPVPTINTALLLSSGATLTVSHHALRENHRRK EEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHEEEECCCEEEEEHHHHHHCCCHH AIVWLAATIVLGVSFLFLQGFEYFHAYNELNLTLASGVYGSTFFLLTGFHGFHVFLGGTM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHCCCHHHHHHHHHH LTVVLVRMLRGHFKPDHHFAFEGAAWYWHFVDVVWLGLYVVVYWLS HHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SGQHESPYYFIPHPSRHPINAALGLLVMLGSAALWINGHAWAPITVTLGLLWLLFVLYH CCCCCCCEEECCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHH WFGDAISESEGGMYGQRVDKSYRWSMSWFIFSEVMFFGAFFGALFYAREIALHQLGSLDY HHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE RLIWPDFSAVWPNEGPAALAGHFRTMGPWPVPTINTALLLSSGATLTVSHHALRENHRRK EEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHEEEECCCEEEEEHHHHHHCCCHH AIVWLAATIVLGVSFLFLQGFEYFHAYNELNLTLASGVYGSTFFLLTGFHGFHVFLGGTM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHCCCHHHHHHHHHH LTVVLVRMLRGHFKPDHHFAFEGAAWYWHFVDVVWLGLYVVVYWLS HHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3019767; 2832167; 7651515 [H]