| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028698
Identifier: 238028698
GI number: 238028698
Start: 3597020
End: 3597733
Strand: Reverse
Name: 238028698
Synonym: bglu_1g31620
Alternate gene names: NA
Gene position: 3597733-3597020 (Counterclockwise)
Preceding gene: 238028700
Following gene: 238028697
Centisome position: 92.1
GC content: 71.85
Gene sequence:
>714_bases GTGAAGCTGCGCTGGCTGCCCACGCTGCTGATCCTCGCGGTGATCGCCGTGACGCTGCGGCTCGGCTTCTGGCAGCGCGA TCGCGCGCATCGGAAAGAGGCGCTCGAGGCGCAGGTGCAGCGCTACGAGCATGCGGCCCCGTTCGAGGCGAGCTCGGCGC CGACGGCGCTCGGCGCGGTCGAGTTCCACCGCGTGCGTGCGACGGGTCGCTTCCTTCCCGCTGCCGCGGTTTATCTCGAT AATCGCGCCTACCGCGATCAGCCCGGCTTCTACGTGGTGATGCCGATGCGGCTCGCGGACGGCGGCTACGTGCTCGTCAA CCGCGGCTGGCTGCCGCGCAACAGCGCCGACCGCACCGCGATGGCGCCGTTCGCGACGCCGTCCGGCACCGTGACGATCG AAGGCATCGCGCGCGCCGACGCGTCGCGCGCGTTCGAACTGGGGCGGGGTGGTTCGGCCGGGCACCAGCCGATTCGCCAG AATCTCGAGCTCGCCGCCTATGCGCGGGAAACCGGGCTGCCGCTGCAGTCCTACGTGATCCAGCAGACCAGCGACAGCGG CGACGGCCTGGTGCGCGATTGGCCGCAGCCGACGCAGGATGTGGGGCGCAACTACGGCTACATGGTGCAGTGGTGGGCGA TCGCCGCGGCGGCGGCCGGTTTCGGGCTCTACGCGGCGCGGCGCGCGGCGCGCAAGCCTTCGGGCGCGACCTGA
Upstream 100 bases:
>100_bases CGAGGATGTGCATGGCACTTACCGTGATATGGCGATTCGTCGCAGACGTGGCGATTATCCCACTTCGATCGCGTCGATGT GACACGTCGGAGCGTCTGCG
Downstream 100 bases:
>100_bases GCGCGCCACCGGCGGCGTTCGGCGCCGCGCCCCGCTCCCTATCCAGACGATGAAGAGGAATTTCGTGTCGACCCAGCCTT CCCGTCCGACGCCGGCCCGG
Product: SURF1 family protein
Products: NA
Alternate protein names: Transmembrane Cytochrome Oxidase; Surfeit Locus 1 Family Protein; Transmembrane Cytochrome Oxidase Complex Biogenesis Factor; Transmembrane Cytochrome Oxidase Complex Biogenesis Protein; SURF1-Like Protein; Transmembrane Cytochrome Oxidase Complex Protein; Cytochrome C Oxidase Assembly; Surfeit Locus 1-Like Protein; Cytochrome Oxidase Complex Biogenesis Factor; Cytochrome Oxidase Assembly Protein SurF1 ; Transmembrane Cytochrome Oxidase Biogenesis Protein
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MKLRWLPTLLILAVIAVTLRLGFWQRDRAHRKEALEAQVQRYEHAAPFEASSAPTALGAVEFHRVRATGRFLPAAAVYLD NRAYRDQPGFYVVMPMRLADGGYVLVNRGWLPRNSADRTAMAPFATPSGTVTIEGIARADASRAFELGRGGSAGHQPIRQ NLELAAYARETGLPLQSYVIQQTSDSGDGLVRDWPQPTQDVGRNYGYMVQWWAIAAAAAGFGLYAARRAARKPSGAT
Sequences:
>Translated_237_residues MKLRWLPTLLILAVIAVTLRLGFWQRDRAHRKEALEAQVQRYEHAAPFEASSAPTALGAVEFHRVRATGRFLPAAAVYLD NRAYRDQPGFYVVMPMRLADGGYVLVNRGWLPRNSADRTAMAPFATPSGTVTIEGIARADASRAFELGRGGSAGHQPIRQ NLELAAYARETGLPLQSYVIQQTSDSGDGLVRDWPQPTQDVGRNYGYMVQWWAIAAAAAGFGLYAARRAARKPSGAT >Mature_237_residues MKLRWLPTLLILAVIAVTLRLGFWQRDRAHRKEALEAQVQRYEHAAPFEASSAPTALGAVEFHRVRATGRFLPAAAVYLD NRAYRDQPGFYVVMPMRLADGGYVLVNRGWLPRNSADRTAMAPFATPSGTVTIEGIARADASRAFELGRGGSAGHQPIRQ NLELAAYARETGLPLQSYVIQQTSDSGDGLVRDWPQPTQDVGRNYGYMVQWWAIAAAAAGFGLYAARRAARKPSGAT
Specific function: Unknown
COG id: COG3346
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26000; Mature: 26000
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: PS50895 SURF1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRWLPTLLILAVIAVTLRLGFWQRDRAHRKEALEAQVQRYEHAAPFEASSAPTALGAV CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH EFHRVRATGRFLPAAAVYLDNRAYRDQPGFYVVMPMRLADGGYVLVNRGWLPRNSADRTA HHHHHHHCCCCCCHHHEEECCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCE MAPFATPSGTVTIEGIARADASRAFELGRGGSAGHQPIRQNLELAAYARETGLPLQSYVI ECCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHCCCHHHHHH QQTSDSGDGLVRDWPQPTQDVGRNYGYMVQWWAIAAAAAGFGLYAARRAARKPSGAT HCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKLRWLPTLLILAVIAVTLRLGFWQRDRAHRKEALEAQVQRYEHAAPFEASSAPTALGAV CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH EFHRVRATGRFLPAAAVYLDNRAYRDQPGFYVVMPMRLADGGYVLVNRGWLPRNSADRTA HHHHHHHCCCCCCHHHEEECCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCE MAPFATPSGTVTIEGIARADASRAFELGRGGSAGHQPIRQNLELAAYARETGLPLQSYVI ECCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHCCCHHHHHH QQTSDSGDGLVRDWPQPTQDVGRNYGYMVQWWAIAAAAAGFGLYAARRAARKPSGAT HCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA