| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is glmS [H]
Identifier: 238028687
GI number: 238028687
Start: 3583069
End: 3584076
Strand: Reverse
Name: glmS [H]
Synonym: bglu_1g31510
Alternate gene names: 238028687
Gene position: 3584076-3583069 (Counterclockwise)
Preceding gene: 238028688
Following gene: 238028686
Centisome position: 91.75
GC content: 73.71
Gene sequence:
>1008_bases ATGCTTGAAGAGGCGCGCGAAGCGTCCCGCGTGGTCGCCGCGCAACTGGCCGACACCTCGCGCCTGGAGGCGCTCGCCGA GCGCCTGCTCGCCGCACCGCCGCAGGTGGCGCTGACGGTCGCGCGCGGCAGCTCGGACCACGCCGCCAGCTATTTCGCGA GCCTGACGATGAGCCGGCTCGGCGTGCCGGTGGCCTCGCTGCCGATGTCGGTGGCGACCCTGCAGCAGGCGCCGCTGCGC GTGCGCGGCCAGCTCGCGGTCGGCTTCTCGCAGTCGGGCAAGAGTCCCGACCTCGTCAACACCCTCACCGCGCTGCGCGA CGCCGGCGCGCTGACGGTGGCGGCCGTCAACGTGCTGGCCTCGCCGCTCGCGGAGGCGAGCGAATACGCGCTGCCGATCG GGGCGGGCCCCGAGCTGTCGGTGGCCGCCACCAAGAGCTACATCGCGATGCTGTCGCTGTCGGCGCAGATCGTGGCGCTC TGGCAGCGCGACGCGGCACTGATGACGGGCCTGCGCGCATTGCCCGAGACGCTCGCGAGCGCGGGCGCGCTCGACTGGAG CGCGGCGATCGACGAGCTGCGCGGGGTCGAGCGCATGATCGTGATCGGCCGCGGGCTCGGTCTCGCGATCGCGCAGGAGG CCGCGCTGAAGCTGAAGGAGACCTCGGGCATCCAGGCCGAGGCGTTCTCGAGCGCAGAGGTGCGGCACGGCCCGATGGAA TTGATCGACCGCGACTATCCGCTGCTGGTGTTCGCGCCGCCGGGCCCCGAGCAGGCCGGCCTGCTGCAGTTCGCGGCCGA CATGCGCCAGCGCGGCGCGCGGGTGCTGCTGGCCGCGCCCGAGGGCACGCCCGGCGCGCTGCTGCCGCTCGCGCGCGCGG CCCACACGGCGCTCGACCCGATCGCCGCGATCCTGTCGTTCTACGTGATGGCCGCGCATCTGGCGGTCGCGCGCGGGCGC GATCCGGATGCGCCGCGCCACCTGAACAAAGTCACCGAAACACACTGA
Upstream 100 bases:
>100_bases CGCGGCCGCCTCGCGCGCGGCGCCTGGGCCGACATCGCCGTGTTCGACCGCGACCTGAACCTGAGCGCGACCTACGTCGA AGGAGAATCGATTGTCGAAT
Downstream 100 bases:
>100_bases GTCGCGAGACAGACGATGAGACGTGCCGAGGAGTCCCAGTTGAAGAACGCATCCCCTGAACAGTTCGTCCTGCTCGCGCC GCTGACGGGGCCGGCCGTGC
Product: glutamine-fructose-6-phosphate transaminase
Products: NA
Alternate protein names: D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine-D-fructose-6-phosphate amidotransferase [H]
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MLEEAREASRVVAAQLADTSRLEALAERLLAAPPQVALTVARGSSDHAASYFASLTMSRLGVPVASLPMSVATLQQAPLR VRGQLAVGFSQSGKSPDLVNTLTALRDAGALTVAAVNVLASPLAEASEYALPIGAGPELSVAATKSYIAMLSLSAQIVAL WQRDAALMTGLRALPETLASAGALDWSAAIDELRGVERMIVIGRGLGLAIAQEAALKLKETSGIQAEAFSSAEVRHGPME LIDRDYPLLVFAPPGPEQAGLLQFAADMRQRGARVLLAAPEGTPGALLPLARAAHTALDPIAAILSFYVMAAHLAVARGR DPDAPRHLNKVTETH
Sequences:
>Translated_335_residues MLEEAREASRVVAAQLADTSRLEALAERLLAAPPQVALTVARGSSDHAASYFASLTMSRLGVPVASLPMSVATLQQAPLR VRGQLAVGFSQSGKSPDLVNTLTALRDAGALTVAAVNVLASPLAEASEYALPIGAGPELSVAATKSYIAMLSLSAQIVAL WQRDAALMTGLRALPETLASAGALDWSAAIDELRGVERMIVIGRGLGLAIAQEAALKLKETSGIQAEAFSSAEVRHGPME LIDRDYPLLVFAPPGPEQAGLLQFAADMRQRGARVLLAAPEGTPGALLPLARAAHTALDPIAAILSFYVMAAHLAVARGR DPDAPRHLNKVTETH >Mature_335_residues MLEEAREASRVVAAQLADTSRLEALAERLLAAPPQVALTVARGSSDHAASYFASLTMSRLGVPVASLPMSVATLQQAPLR VRGQLAVGFSQSGKSPDLVNTLTALRDAGALTVAAVNVLASPLAEASEYALPIGAGPELSVAATKSYIAMLSLSAQIVAL WQRDAALMTGLRALPETLASAGALDWSAAIDELRGVERMIVIGRGLGLAIAQEAALKLKETSGIQAEAFSSAEVRHGPME LIDRDYPLLVFAPPGPEQAGLLQFAADMRQRGARVLLAAPEGTPGALLPLARAAHTALDPIAAILSFYVMAAHLAVARGR DPDAPRHLNKVTETH
Specific function: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source [H]
COG id: COG2222
COG function: function code M; Predicted phosphosugar isomerases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SIS domains [H]
Homologues:
Organism=Homo sapiens, GI4826742, Length=268, Percent_Identity=30.9701492537313, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI205277386, Length=268, Percent_Identity=29.1044776119403, Blast_Score=112, Evalue=5e-25, Organism=Escherichia coli, GI1790167, Length=341, Percent_Identity=30.2052785923754, Blast_Score=114, Evalue=8e-27, Organism=Caenorhabditis elegans, GI17532897, Length=310, Percent_Identity=26.7741935483871, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17532899, Length=310, Percent_Identity=26.7741935483871, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17539970, Length=309, Percent_Identity=25.8899676375405, Blast_Score=103, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6322745, Length=311, Percent_Identity=27.0096463022508, Blast_Score=102, Evalue=7e-23, Organism=Saccharomyces cerevisiae, GI6323731, Length=205, Percent_Identity=23.4146341463415, Blast_Score=69, Evalue=9e-13, Organism=Drosophila melanogaster, GI21357745, Length=308, Percent_Identity=27.2727272727273, Blast_Score=119, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000583 - InterPro: IPR017932 - InterPro: IPR005855 - InterPro: IPR001347 [H]
Pfam domain/function: PF00310 GATase_2; PF01380 SIS [H]
EC number: =2.6.1.16 [H]
Molecular weight: Translated: 34904; Mature: 34904
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEEAREASRVVAAQLADTSRLEALAERLLAAPPQVALTVARGSSDHAASYFASLTMSRL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHH GVPVASLPMSVATLQQAPLRVRGQLAVGFSQSGKSPDLVNTLTALRDAGALTVAAVNVLA CCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH SPLAEASEYALPIGAGPELSVAATKSYIAMLSLSAQIVALWQRDAALMTGLRALPETLAS HHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGALDWSAAIDELRGVERMIVIGRGLGLAIAQEAALKLKETSGIQAEAFSSAEVRHGPME CCCCHHHHHHHHHHCHHEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHCCCCHH LIDRDYPLLVFAPPGPEQAGLLQFAADMRQRGARVLLAAPEGTPGALLPLARAAHTALDP HHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHH IAAILSFYVMAAHLAVARGRDPDAPRHLNKVTETH HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MLEEAREASRVVAAQLADTSRLEALAERLLAAPPQVALTVARGSSDHAASYFASLTMSRL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHH GVPVASLPMSVATLQQAPLRVRGQLAVGFSQSGKSPDLVNTLTALRDAGALTVAAVNVLA CCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH SPLAEASEYALPIGAGPELSVAATKSYIAMLSLSAQIVALWQRDAALMTGLRALPETLAS HHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGALDWSAAIDELRGVERMIVIGRGLGLAIAQEAALKLKETSGIQAEAFSSAEVRHGPME CCCCHHHHHHHHHHCHHEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHCCCCHH LIDRDYPLLVFAPPGPEQAGLLQFAADMRQRGARVLLAAPEGTPGALLPLARAAHTALDP HHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHH IAAILSFYVMAAHLAVARGRDPDAPRHLNKVTETH HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]