Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is nagA [H]

Identifier: 238028688

GI number: 238028688

Start: 3584069

End: 3585172

Strand: Reverse

Name: nagA [H]

Synonym: bglu_1g31520

Alternate gene names: 238028688

Gene position: 3585172-3584069 (Counterclockwise)

Preceding gene: 238028689

Following gene: 238028687

Centisome position: 91.77

GC content: 70.2

Gene sequence:

>1104_bases
ATGCTGACCGGAAACCTACTGACCGCCGAAGGCTGGCGCTACGGCACGATCGAGTTCGGCAACGGCCGGATCACCGCGCT
GTCGGGCCATGCCGTCGACCCGTCGATGAACGACGCGCCGTACATCGTGCCGGGCTTCATCGACCTGCACGTGCATGGCG
GCGGCGGAGCCGACGTGATGGAGGGCGGCGACGCGATCGAGACCATCGGCCGGACCCACGCCCGCTACGGCACCACCAGC
CTGCTCGCCACCACCATGACGGCGCCGCGCGACGAACTGATGAAGGTGGTCGCGCAGCTCGGCGAGCGCGCGCGCAACCG
CACGCCGGGCTGCGCGCGCGTGCTCGGCGTCCATCTCGAAGGCCCTTACATCAACCCCGGCAAGCTCGGCGCGCAGCCCG
ACGCGGCGGTATCGGCCGCGCTCGACGAGGTGCTGCGCTATCTCGCGATCGCGCCGATCCGCGTGGTCACGCTCGCGCCC
GAGATCGCCGGCCACATCGAGATCATCTCGGAGATGGCCGCGCGCGGCGTGCGCGTGCAGCTCGGCCATTCGCTCGCCAC
CTATGAGGAGGGCGTCGCCGCGCTCAAGCATGGCGCCTGCGGCTTCACGCACCTGTTCAACGCGATGTCGCCGCTGCACC
ACCGCAACCCCGGTCTGGTCGGCGCCGCGCTCGCCCATGCCGAGTACGCGGAGATCATCCCCGACCTGCTGCACGTCCAT
CCCGGTGCGATCCGCGCCGCGCTGCGCGCGATCCCGCGCCTGTACGTGGTGACCGACAGCACCTCGGCCACCGGCATGCC
CGACGGCGAATACCGGCTCGGCAGCCAGCACGTCACCAAGTGTCTCGGCGGCGTGCGGCTGGCCGACGGCACGCTGGCCG
GCAGCACGCTGACGATGGACCAGGCGTTCCGCAACCTGGTGTCGATCGGGCTGCCGATCGCCGACGTATCGAACCGGATG
TCGCGCTTCGCCGCCGACTATCTCGGCCTCGAGGATCGCGGCCGCCTCGCGCGCGGCGCCTGGGCCGACATCGCCGTGTT
CGACCGCGACCTGAACCTGAGCGCGACCTACGTCGAAGGAGAATCGATTGTCGAATATGCTTGA

Upstream 100 bases:

>100_bases
TGGTTATATAATCAGCTCGCTTCGGCCGGGGGCGAGCCCGTCGCGGCCCGCCGGCCGGCCTTCTCTCGCAACCCGCATGA
CCCGGATACAAGTGAACGAG

Downstream 100 bases:

>100_bases
AGAGGCGCGCGAAGCGTCCCGCGTGGTCGCCGCGCAACTGGCCGACACCTCGCGCCTGGAGGCGCTCGCCGAGCGCCTGC
TCGCCGCACCGCCGCAGGTG

Product: N-acetylglucosamine-6-phosphate deacetylase

Products: NA

Alternate protein names: GlcNAc 6-P deacetylase [H]

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MLTGNLLTAEGWRYGTIEFGNGRITALSGHAVDPSMNDAPYIVPGFIDLHVHGGGGADVMEGGDAIETIGRTHARYGTTS
LLATTMTAPRDELMKVVAQLGERARNRTPGCARVLGVHLEGPYINPGKLGAQPDAAVSAALDEVLRYLAIAPIRVVTLAP
EIAGHIEIISEMAARGVRVQLGHSLATYEEGVAALKHGACGFTHLFNAMSPLHHRNPGLVGAALAHAEYAEIIPDLLHVH
PGAIRAALRAIPRLYVVTDSTSATGMPDGEYRLGSQHVTKCLGGVRLADGTLAGSTLTMDQAFRNLVSIGLPIADVSNRM
SRFAADYLGLEDRGRLARGAWADIAVFDRDLNLSATYVEGESIVEYA

Sequences:

>Translated_367_residues
MLTGNLLTAEGWRYGTIEFGNGRITALSGHAVDPSMNDAPYIVPGFIDLHVHGGGGADVMEGGDAIETIGRTHARYGTTS
LLATTMTAPRDELMKVVAQLGERARNRTPGCARVLGVHLEGPYINPGKLGAQPDAAVSAALDEVLRYLAIAPIRVVTLAP
EIAGHIEIISEMAARGVRVQLGHSLATYEEGVAALKHGACGFTHLFNAMSPLHHRNPGLVGAALAHAEYAEIIPDLLHVH
PGAIRAALRAIPRLYVVTDSTSATGMPDGEYRLGSQHVTKCLGGVRLADGTLAGSTLTMDQAFRNLVSIGLPIADVSNRM
SRFAADYLGLEDRGRLARGAWADIAVFDRDLNLSATYVEGESIVEYA
>Mature_367_residues
MLTGNLLTAEGWRYGTIEFGNGRITALSGHAVDPSMNDAPYIVPGFIDLHVHGGGGADVMEGGDAIETIGRTHARYGTTS
LLATTMTAPRDELMKVVAQLGERARNRTPGCARVLGVHLEGPYINPGKLGAQPDAAVSAALDEVLRYLAIAPIRVVTLAP
EIAGHIEIISEMAARGVRVQLGHSLATYEEGVAALKHGACGFTHLFNAMSPLHHRNPGLVGAALAHAEYAEIIPDLLHVH
PGAIRAALRAIPRLYVVTDSTSATGMPDGEYRLGSQHVTKCLGGVRLADGTLAGSTLTMDQAFRNLVSIGLPIADVSNRM
SRFAADYLGLEDRGRLARGAWADIAVFDRDLNLSATYVEGESIVEYA

Specific function: N-acetylglucosamine utilization. [C]

COG id: COG1820

COG function: function code G; N-acetylglucosamine-6-phosphate deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nagA family [H]

Homologues:

Organism=Homo sapiens, GI21361513, Length=373, Percent_Identity=34.5844504021448, Blast_Score=166, Evalue=3e-41,
Organism=Homo sapiens, GI224922791, Length=368, Percent_Identity=34.7826086956522, Blast_Score=164, Evalue=2e-40,
Organism=Escherichia coli, GI1786892, Length=346, Percent_Identity=35.2601156069364, Blast_Score=151, Evalue=6e-38,
Organism=Caenorhabditis elegans, GI17553768, Length=343, Percent_Identity=33.5276967930029, Blast_Score=154, Evalue=6e-38,
Organism=Drosophila melanogaster, GI19920392, Length=341, Percent_Identity=35.1906158357771, Blast_Score=175, Evalue=4e-44,
Organism=Drosophila melanogaster, GI281361140, Length=356, Percent_Identity=33.7078651685393, Blast_Score=170, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680
- InterPro:   IPR003764
- InterPro:   IPR011059 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: =3.5.1.25 [H]

Molecular weight: Translated: 38869; Mature: 38869

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTGNLLTAEGWRYGTIEFGNGRITALSGHAVDPSMNDAPYIVPGFIDLHVHGGGGADVM
CCCCCEEEECCCEEEEEEECCCEEEEEECCCCCCCCCCCCEEECCEEEEEEECCCCCCHH
EGGDAIETIGRTHARYGTTSLLATTMTAPRDELMKVVAQLGERARNRTPGCARVLGVHLE
CCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEC
GPYINPGKLGAQPDAAVSAALDEVLRYLAIAPIRVVTLAPEIAGHIEIISEMAARGVRVQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHCCEEEE
LGHSLATYEEGVAALKHGACGFTHLFNAMSPLHHRNPGLVGAALAHAEYAEIIPDLLHVH
ECCCHHHHHHHHHHHHCCCCHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PGAIRAALRAIPRLYVVTDSTSATGMPDGEYRLGSQHVTKCLGGVRLADGTLAGSTLTMD
CHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCEEEHH
QAFRNLVSIGLPIADVSNRMSRFAADYLGLEDRGRLARGAWADIAVFDRDLNLSATYVEG
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECC
ESIVEYA
CHHHCCC
>Mature Secondary Structure
MLTGNLLTAEGWRYGTIEFGNGRITALSGHAVDPSMNDAPYIVPGFIDLHVHGGGGADVM
CCCCCEEEECCCEEEEEEECCCEEEEEECCCCCCCCCCCCEEECCEEEEEEECCCCCCHH
EGGDAIETIGRTHARYGTTSLLATTMTAPRDELMKVVAQLGERARNRTPGCARVLGVHLE
CCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEC
GPYINPGKLGAQPDAAVSAALDEVLRYLAIAPIRVVTLAPEIAGHIEIISEMAARGVRVQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHCCEEEE
LGHSLATYEEGVAALKHGACGFTHLFNAMSPLHHRNPGLVGAALAHAEYAEIIPDLLHVH
ECCCHHHHHHHHHHHHCCCCHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PGAIRAALRAIPRLYVVTDSTSATGMPDGEYRLGSQHVTKCLGGVRLADGTLAGSTLTMD
CHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCEEEHH
QAFRNLVSIGLPIADVSNRMSRFAADYLGLEDRGRLARGAWADIAVFDRDLNLSATYVEG
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECC
ESIVEYA
CHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA