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The map label for this gene is atoE [H]

Identifier: 238028673

GI number: 238028673

Start: 3564672

End: 3565994

Strand: Direct

Name: atoE [H]

Synonym: bglu_1g31370

Alternate gene names: 238028673

Gene position: 3564672-3565994 (Clockwise)

Preceding gene: 238028671

Following gene: 238028676

Centisome position: 91.25

GC content: 67.12

Gene sequence:

>1323_bases
GTGATTTCCCGCATTTCCCGCTTTTTCACCCAGATCGTGCATCGAGTGCTGCCCGATCCGCTGATCTTCGCGATCTTTCT
GACCGTGGTCACCTTCGTGCTCGCGTTCTCGCTCACGCCGAAGACACCTGGAGAACTCGTGCTGCTGTGGGGCGGCGGGT
TCTGGAACCTGCTCGCGTTCACGATGCAGATGGCGCTGATCCTGGTCACGGGGCACGCGCTCGCCAGCTCCGGTCCGGTC
AAGCGCCTGCTGGTCGCGCTTGCGAGCTCACCGAAGACGCCGGCGCAGGGCGTGATGCTGGTGGCCTTCGTGGCCGGCGT
GGCCTGCGCGATCAACTGGGGCTTCGGTCTCGTGCTCGGCGCGATGCTCGCGCGCGAGGTTGCACGGCGCGTGCCCGGCT
CCGACTACCGCCTGCTCGTCGCCTCGGCCTACATGGGTTTCCTGACCTGGCACGGCGGCCTGTCCGGCTCGGTGCCGCTG
GTCGCCGCGACCAAGGGCAATCCGATGGAGAAGGTGATCGGCCTGATCCCCGTCTCGCAGACGCTGTTCACCGGCTACAA
CGCGTTCGTCACGATCGGCCTGATCGTGATGCTGCCGTTCCTCGCGCGGCTGATGATGCCGAAGCCCGGCGAGGTGGTGA
CGGTCGATCCGAAGCTGCTCGAGGATCCGCCCAGCTTCGAGCGCAAGCTCGCGCCCGGCGCAACCTGGGCCGAGCGCATG
GAGGAAAGCCGCCTGCTGTCGCTGCTGGTCGCGCTGCTGTGCCTGGTGTTTCTCGTGATCCGCACGCGCACCAGGGGGTT
CATGCTCGACATCGACACCGTCAACCTGGTGTTTCTTGCCGCCGGCCTGGTGCTGCACCGCACGCCGATGGCCTATGCGC
GCGCGATCGGCGCAGCCGCGCGCGGCGCCGGCGCGATCATGATCCAGTTCCCGTTCTATGCCGGCATCCAGGCGCTAATG
GATCATTCCGGGCTGGCCGGCGTGATCACGAATTGGTTCGTCGACATCGCCAACGTCCATACGTTTGCGCTGCTCACGTT
CCTCAGTTCGGCCGTGATCAACTTCGCGGTGCCCTCGGGCGGTGGCCACTGGGTGGTGCAAGGGCCGTTCGTGATGCCGG
CCGCGCAGGCGCTCGGCGTCGATCTCGGCAAGTCCGCGATGGCGATCGCCTACGGCGAGGCCTGGACCAACATGGCCCAG
CCGTTCTGGGCGCTGCCCGCGCTCGCGATCGCCGGGCTCGGCGTGCGCGACATCATGGGCTACTGCGTGACGGCGCTGCT
GTTCTCGGGCGTGGTGTTCGTCGCGGGGCTGTACCTGTTCTGA

Upstream 100 bases:

>100_bases
CGGCTTTGCGACCGGCAATCCGGCTCGCACCGGCCGCCCGGCAACGGGCGGCGAATCATATCAACCACAACGACCGAACT
CACCAGCCAGGAGGAGACCC

Downstream 100 bases:

>100_bases
ACCGGCGGCCTCCCGTGGCGGGAGGCCGGACGCGCGCGCCGCGCGGGCAACGGTTCGGAACGGTAAGAAAAAGGGCCGGC
CGGCGCGGCGCCGGGCGTGA

Product: short-chain fatty acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MISRISRFFTQIVHRVLPDPLIFAIFLTVVTFVLAFSLTPKTPGELVLLWGGGFWNLLAFTMQMALILVTGHALASSGPV
KRLLVALASSPKTPAQGVMLVAFVAGVACAINWGFGLVLGAMLAREVARRVPGSDYRLLVASAYMGFLTWHGGLSGSVPL
VAATKGNPMEKVIGLIPVSQTLFTGYNAFVTIGLIVMLPFLARLMMPKPGEVVTVDPKLLEDPPSFERKLAPGATWAERM
EESRLLSLLVALLCLVFLVIRTRTRGFMLDIDTVNLVFLAAGLVLHRTPMAYARAIGAAARGAGAIMIQFPFYAGIQALM
DHSGLAGVITNWFVDIANVHTFALLTFLSSAVINFAVPSGGGHWVVQGPFVMPAAQALGVDLGKSAMAIAYGEAWTNMAQ
PFWALPALAIAGLGVRDIMGYCVTALLFSGVVFVAGLYLF

Sequences:

>Translated_440_residues
MISRISRFFTQIVHRVLPDPLIFAIFLTVVTFVLAFSLTPKTPGELVLLWGGGFWNLLAFTMQMALILVTGHALASSGPV
KRLLVALASSPKTPAQGVMLVAFVAGVACAINWGFGLVLGAMLAREVARRVPGSDYRLLVASAYMGFLTWHGGLSGSVPL
VAATKGNPMEKVIGLIPVSQTLFTGYNAFVTIGLIVMLPFLARLMMPKPGEVVTVDPKLLEDPPSFERKLAPGATWAERM
EESRLLSLLVALLCLVFLVIRTRTRGFMLDIDTVNLVFLAAGLVLHRTPMAYARAIGAAARGAGAIMIQFPFYAGIQALM
DHSGLAGVITNWFVDIANVHTFALLTFLSSAVINFAVPSGGGHWVVQGPFVMPAAQALGVDLGKSAMAIAYGEAWTNMAQ
PFWALPALAIAGLGVRDIMGYCVTALLFSGVVFVAGLYLF
>Mature_440_residues
MISRISRFFTQIVHRVLPDPLIFAIFLTVVTFVLAFSLTPKTPGELVLLWGGGFWNLLAFTMQMALILVTGHALASSGPV
KRLLVALASSPKTPAQGVMLVAFVAGVACAINWGFGLVLGAMLAREVARRVPGSDYRLLVASAYMGFLTWHGGLSGSVPL
VAATKGNPMEKVIGLIPVSQTLFTGYNAFVTIGLIVMLPFLARLMMPKPGEVVTVDPKLLEDPPSFERKLAPGATWAERM
EESRLLSLLVALLCLVFLVIRTRTRGFMLDIDTVNLVFLAAGLVLHRTPMAYARAIGAAARGAGAIMIQFPFYAGIQALM
DHSGLAGVITNWFVDIANVHTFALLTFLSSAVINFAVPSGGGHWVVQGPFVMPAAQALGVDLGKSAMAIAYGEAWTNMAQ
PFWALPALAIAGLGVRDIMGYCVTALLFSGVVFVAGLYLF

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=440, Percent_Identity=67.5, Blast_Score=613, Evalue=1e-177,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 46970; Mature: 46970

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRISRFFTQIVHRVLPDPLIFAIFLTVVTFVLAFSLTPKTPGELVLLWGGGFWNLLAF
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHH
TMQMALILVTGHALASSGPVKRLLVALASSPKTPAQGVMLVAFVAGVACAINWGFGLVLG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
AMLAREVARRVPGSDYRLLVASAYMGFLTWHGGLSGSVPLVAATKGNPMEKVIGLIPVSQ
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHCCHH
TLFTGYNAFVTIGLIVMLPFLARLMMPKPGEVVTVDPKLLEDPPSFERKLAPGATWAERM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHCCCCCHHHHCCCCCHHHHHH
EESRLLSLLVALLCLVFLVIRTRTRGFMLDIDTVNLVFLAAGLVLHRTPMAYARAIGAAA
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RGAGAIMIQFPFYAGIQALMDHSGLAGVITNWFVDIANVHTFALLTFLSSAVINFAVPSG
CCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
GGHWVVQGPFVMPAAQALGVDLGKSAMAIAYGEAWTNMAQPFWALPALAIAGLGVRDIMG
CCEEEEECCCHHHHHHHHCCCCCCCHHEEEECHHHHHHCCHHHHHHHHHHHCCCHHHHHH
YCVTALLFSGVVFVAGLYLF
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MISRISRFFTQIVHRVLPDPLIFAIFLTVVTFVLAFSLTPKTPGELVLLWGGGFWNLLAF
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHH
TMQMALILVTGHALASSGPVKRLLVALASSPKTPAQGVMLVAFVAGVACAINWGFGLVLG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
AMLAREVARRVPGSDYRLLVASAYMGFLTWHGGLSGSVPLVAATKGNPMEKVIGLIPVSQ
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHCCHH
TLFTGYNAFVTIGLIVMLPFLARLMMPKPGEVVTVDPKLLEDPPSFERKLAPGATWAERM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHCCCCCHHHHCCCCCHHHHHH
EESRLLSLLVALLCLVFLVIRTRTRGFMLDIDTVNLVFLAAGLVLHRTPMAYARAIGAAA
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RGAGAIMIQFPFYAGIQALMDHSGLAGVITNWFVDIANVHTFALLTFLSSAVINFAVPSG
CCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
GGHWVVQGPFVMPAAQALGVDLGKSAMAIAYGEAWTNMAQPFWALPALAIAGLGVRDIMG
CCEEEEECCCHHHHHHHHCCCCCCCHHEEEECHHHHHHCCHHHHHHHHHHHCCCHHHHHH
YCVTALLFSGVVFVAGLYLF
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]