Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028662

Identifier: 238028662

GI number: 238028662

Start: 3554103

End: 3554738

Strand: Direct

Name: 238028662

Synonym: bglu_1g31260

Alternate gene names: NA

Gene position: 3554103-3554738 (Clockwise)

Preceding gene: 238028661

Following gene: 238028665

Centisome position: 90.98

GC content: 67.92

Gene sequence:

>636_bases
ATGTCATCGCTTTCGACCACGCTCATCGATTTGCCTCTGTTCCCGCTGCGCACGGTGTTGTTCCCCGGCGGCCTGCTGCC
GCTGAAGGTGTTTGAACAGCGCTACGTCGACATGGTCCGTTCGTGCCTGCGCGATCATGCGCCGTTCGGCGTCTGCCTGC
TCAAGAGCGGCCCAGAGGTCGCCCAGGACGACGCGGTATCGGTGCCGGAGGCGGTCGGCTGCATGGCCGAGATCATCGAA
TGCGATACCGGCGAGTTCGGCATGCTGCTGCTGCGCACCGTCGGCACGCGGCGTTTCCGGCTGCTCTCGCACCGCGTCGA
GGCCCACGGCCTGCTGGTCGGCATCGCCGAGCCGCTCCCCGAGGACGAGCCGCTCGACGGCGAGCTGTCGATCGCGCAGT
TCGGCGCCTGCGCGGAAGTGCTCGAGCGCATCGTCGGCGCGCTGCGCAACGTCAAGGCCGGCGAGCTGCCGTTTCTCGAG
CCGTTCCATTTCGAGGATCCGACCTGGGTGTCGAACCGGCTCGCCGAGGTGCTGCCGCTCGATCTGCGCACGCGGCAGAA
GCTGATGGAACTCCCCGGCGTCGGCGCGCGGATCGACGCCGTGCATCAGGTGCTCAAGCGCCACGACTGGCTGTGA

Upstream 100 bases:

>100_bases
GGCGAACGTGATAGTGCGGCATCGTGACGCGCCGGTTGATGCCGATGCGTCGTCGCGGCTCGTCACCTGAGCGAGCCGTT
CCTCGTCAAGGGGGCGCCAC

Downstream 100 bases:

>100_bases
GCGCACGGGCGGGGCGGCCCGGGCCGCCCCCCTGCCGCCCCTGAGCATCGGTCAGAGCAGCGTCCCGCTCAGGCTGTCGA
GCAGCTTGCGCACGGGCGCC

Product: ATP-dependent protease La

Products: NA

Alternate protein names: ATP-Dependent Protease La; Peptidase S; Endopeptidase; ATP-Dependent Protease; ATP-Dependent Protease La Domain-Containing Protein; Protease; ATP-Dependent Endopeptidase Lon

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSSLSTTLIDLPLFPLRTVLFPGGLLPLKVFEQRYVDMVRSCLRDHAPFGVCLLKSGPEVAQDDAVSVPEAVGCMAEIIE
CDTGEFGMLLLRTVGTRRFRLLSHRVEAHGLLVGIAEPLPEDEPLDGELSIAQFGACAEVLERIVGALRNVKAGELPFLE
PFHFEDPTWVSNRLAEVLPLDLRTRQKLMELPGVGARIDAVHQVLKRHDWL

Sequences:

>Translated_211_residues
MSSLSTTLIDLPLFPLRTVLFPGGLLPLKVFEQRYVDMVRSCLRDHAPFGVCLLKSGPEVAQDDAVSVPEAVGCMAEIIE
CDTGEFGMLLLRTVGTRRFRLLSHRVEAHGLLVGIAEPLPEDEPLDGELSIAQFGACAEVLERIVGALRNVKAGELPFLE
PFHFEDPTWVSNRLAEVLPLDLRTRQKLMELPGVGARIDAVHQVLKRHDWL
>Mature_210_residues
SSLSTTLIDLPLFPLRTVLFPGGLLPLKVFEQRYVDMVRSCLRDHAPFGVCLLKSGPEVAQDDAVSVPEAVGCMAEIIEC
DTGEFGMLLLRTVGTRRFRLLSHRVEAHGLLVGIAEPLPEDEPLDGELSIAQFGACAEVLERIVGALRNVKAGELPFLEP
FHFEDPTWVSNRLAEVLPLDLRTRQKLMELPGVGARIDAVHQVLKRHDWL

Specific function: Unknown

COG id: COG2802

COG function: function code R; Uncharacterized protein, similar to the N-terminal domain of Lon protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23385; Mature: 23253

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLSTTLIDLPLFPLRTVLFPGGLLPLKVFEQRYVDMVRSCLRDHAPFGVCLLKSGPEV
CCCHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
AQDDAVSVPEAVGCMAEIIECDTGEFGMLLLRTVGTRRFRLLSHRVEAHGLLVGIAEPLP
CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCC
EDEPLDGELSIAQFGACAEVLERIVGALRNVKAGELPFLEPFHFEDPTWVSNRLAEVLPL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
DLRTRQKLMELPGVGARIDAVHQVLKRHDWL
CHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSLSTTLIDLPLFPLRTVLFPGGLLPLKVFEQRYVDMVRSCLRDHAPFGVCLLKSGPEV
CCHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
AQDDAVSVPEAVGCMAEIIECDTGEFGMLLLRTVGTRRFRLLSHRVEAHGLLVGIAEPLP
CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCC
EDEPLDGELSIAQFGACAEVLERIVGALRNVKAGELPFLEPFHFEDPTWVSNRLAEVLPL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
DLRTRQKLMELPGVGARIDAVHQVLKRHDWL
CHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA