Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028665

Identifier: 238028665

GI number: 238028665

Start: 3556819

End: 3558663

Strand: Direct

Name: 238028665

Synonym: bglu_1g31290

Alternate gene names: NA

Gene position: 3556819-3558663 (Clockwise)

Preceding gene: 238028662

Following gene: 238028666

Centisome position: 91.05

GC content: 69.97

Gene sequence:

>1845_bases
ATGACCTTGCCCTCGACGCTGTCCCCGAAGCGCTCCGCCGCCCGCGCGCGCCGCGCGTTCGCCTTTCCGGTTCGCCGCGC
CCTCGGCGCCGCGCTTGTCGCCGCTTGGACGTTCGGCGCGGTTGCCGCGCATGCCCAGACTCCCGCCGACGCACCGGCTG
CCGGCGCGTCCGACGCGCTGGCGCAAAGCGCGTTCTCGCCGGCCTTTCCCGAAGAGAAAAAGGATCTGCCGAACGTGCCG
CTGACGGCGCAGATCGTCTACCAGGTGCTCGCGGCCGAGGTCGCGCTGCAGCGCTCGCAGCCGGCGCCCGCATACCAGAC
CTACCTCGCGCTGGCACGCGACACGAAGGACCCGCGCATGGCGCAGCGGGCCACCGAGATCGCGCTGGCGGCCCAGAGCC
CGGCCGACGCGCTTGCCGCGGCAAATCTGTGGCGCCAGTTCGCGCCCGACTCGAACCGCGCCTCGCAGGTCGACTCGGCG
CTGCTGGTGCTGGCCGGCAAGCCGGCCGAAGCCGAGCCGCTGCTCGCGCGCGAGCTCGCGCGCGCCAACGGCGAGAATCG
CGGCGACGCGCTGCTCGCGCTGCAGGCGCTGATTTCGCGCGGCCCGAACCGGGTCGAGGGCCTGACGGTGCTGCAGGATC
TGCTCAAGAACGACCTCGATCGCCCCGAGGCGCAGCTGGCCATCGCACGCCAGCAGCTCGCCACCGACGACCGGGCGGGC
GCCGTCGCCTCGCTGAAGCAGGCGCTGAAGTTGCGGCCCGACTACCTGCCGGCGGCCCTGATGCTCTCGCAGATGGGTCC
CGACGAGCGCGCGGTCGGCGTGGCCTCGTTCGAGAAGTTCGTCCAGCAGAATCCGAAGTCGCGCGAAGGACGCCTCGCGC
TGGCGCAGCTCTATCTGGCCGACAACCGCCTCGAGGACGCACAGAAGCAGTTCGAGGCGATGCGCAGGAACGATCCGAAG
GAACCGGCGCCGCTGATGGCGCTCGCGCTCGTCAAGATCCAGGAAAAGCATTACGACGACGCGCAGGCCGACCTGAAGCA
GTACATCGAACTCGCCCAGAAGCGCCAGGGCGCCGATGTCGGCCAGGCCTACGTCTACCTTGCGCAGATCGCGATCGAGC
AGAACGACGATGCGCAAGCCTCGCAATGGCTCGACAAGATCGACGCGTCGAGCCCGCATTACATCCCGGCCCAGGTCACG
CGCGCGCAACTGCTCGCCAAGCAGGGCAAAACCGACGAGGCCCGCCAGGTGCTGGCCGGCATCCAGGTCTCCGATCCGCA
CGACGCGGCCGTGATCGCGCGCACCGACGCGTCGCTGCTGTTCGCCGCCAAGCGCTACCGCGAGGCGGCCGACCGGCTGG
CGCAGGCCGTCGAGCAGTTCCCCGACGATCCCGACCTGCGCTACGACTATGCGATGGCCTGCGAGAAGATCGGCCAGTAC
ACGACCATGGAGCAGCAGCTGCGCCTGCTGATCAGCGCCCAGCCGGACAGCCCGCAGGCTTACAACGCGCTCGGCTACTC
GCTCGCGGACCGCAACGAGCGCCTGCCCGAGGCGAACAAGCTGATCGAGCGCGCCAGCGCGCTCGCGCCCAAGGATGCGT
TCATCATGGACAGCCTCGGCTGGGTCAAGTACCGGCTCGGCGACAACGCCGCCGCCGCCAAGATCCTGACGCAGGCCTAT
GCGCTGCAGCCGAACGCCGAGATCGGCGCGCACCTCGGCGAAGTGCTCTGGAAGAGCGGCCAGCGGGACAAGGCCCGCGA
AGTCTGGCGTGCTGCGCAAAAGCTCGAGCCCGACAACGACACGCTCGTCAGCACGCTCAAGCGCTTCGGGGTGAACGGGC
TGTGA

Upstream 100 bases:

>100_bases
GCAACTCTGGCATGGTTTTGTGGTCTGTGTGTGGCTGGTGCGATGGTGCGCGTATTGTAGCGAGCGCGTTACAATCGACC
GAAACCTCGAACGGATTTCC

Downstream 100 bases:

>100_bases
GCACCACGATTCGAACCGGCGCGCGGCTCGCGCGCCACGCTTGCGCCGTGCTCGCCGCGGGCGCCCTGCTGGCCGGCTGC
GCGACGCGCCCCCAGCCGCC

Product: TPR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 614; Mature: 613

Protein sequence:

>614_residues
MTLPSTLSPKRSAARARRAFAFPVRRALGAALVAAWTFGAVAAHAQTPADAPAAGASDALAQSAFSPAFPEEKKDLPNVP
LTAQIVYQVLAAEVALQRSQPAPAYQTYLALARDTKDPRMAQRATEIALAAQSPADALAAANLWRQFAPDSNRASQVDSA
LLVLAGKPAEAEPLLARELARANGENRGDALLALQALISRGPNRVEGLTVLQDLLKNDLDRPEAQLAIARQQLATDDRAG
AVASLKQALKLRPDYLPAALMLSQMGPDERAVGVASFEKFVQQNPKSREGRLALAQLYLADNRLEDAQKQFEAMRRNDPK
EPAPLMALALVKIQEKHYDDAQADLKQYIELAQKRQGADVGQAYVYLAQIAIEQNDDAQASQWLDKIDASSPHYIPAQVT
RAQLLAKQGKTDEARQVLAGIQVSDPHDAAVIARTDASLLFAAKRYREAADRLAQAVEQFPDDPDLRYDYAMACEKIGQY
TTMEQQLRLLISAQPDSPQAYNALGYSLADRNERLPEANKLIERASALAPKDAFIMDSLGWVKYRLGDNAAAAKILTQAY
ALQPNAEIGAHLGEVLWKSGQRDKAREVWRAAQKLEPDNDTLVSTLKRFGVNGL

Sequences:

>Translated_614_residues
MTLPSTLSPKRSAARARRAFAFPVRRALGAALVAAWTFGAVAAHAQTPADAPAAGASDALAQSAFSPAFPEEKKDLPNVP
LTAQIVYQVLAAEVALQRSQPAPAYQTYLALARDTKDPRMAQRATEIALAAQSPADALAAANLWRQFAPDSNRASQVDSA
LLVLAGKPAEAEPLLARELARANGENRGDALLALQALISRGPNRVEGLTVLQDLLKNDLDRPEAQLAIARQQLATDDRAG
AVASLKQALKLRPDYLPAALMLSQMGPDERAVGVASFEKFVQQNPKSREGRLALAQLYLADNRLEDAQKQFEAMRRNDPK
EPAPLMALALVKIQEKHYDDAQADLKQYIELAQKRQGADVGQAYVYLAQIAIEQNDDAQASQWLDKIDASSPHYIPAQVT
RAQLLAKQGKTDEARQVLAGIQVSDPHDAAVIARTDASLLFAAKRYREAADRLAQAVEQFPDDPDLRYDYAMACEKIGQY
TTMEQQLRLLISAQPDSPQAYNALGYSLADRNERLPEANKLIERASALAPKDAFIMDSLGWVKYRLGDNAAAAKILTQAY
ALQPNAEIGAHLGEVLWKSGQRDKAREVWRAAQKLEPDNDTLVSTLKRFGVNGL
>Mature_613_residues
TLPSTLSPKRSAARARRAFAFPVRRALGAALVAAWTFGAVAAHAQTPADAPAAGASDALAQSAFSPAFPEEKKDLPNVPL
TAQIVYQVLAAEVALQRSQPAPAYQTYLALARDTKDPRMAQRATEIALAAQSPADALAAANLWRQFAPDSNRASQVDSAL
LVLAGKPAEAEPLLARELARANGENRGDALLALQALISRGPNRVEGLTVLQDLLKNDLDRPEAQLAIARQQLATDDRAGA
VASLKQALKLRPDYLPAALMLSQMGPDERAVGVASFEKFVQQNPKSREGRLALAQLYLADNRLEDAQKQFEAMRRNDPKE
PAPLMALALVKIQEKHYDDAQADLKQYIELAQKRQGADVGQAYVYLAQIAIEQNDDAQASQWLDKIDASSPHYIPAQVTR
AQLLAKQGKTDEARQVLAGIQVSDPHDAAVIARTDASLLFAAKRYREAADRLAQAVEQFPDDPDLRYDYAMACEKIGQYT
TMEQQLRLLISAQPDSPQAYNALGYSLADRNERLPEANKLIERASALAPKDAFIMDSLGWVKYRLGDNAAAAKILTQAYA
LQPNAEIGAHLGEVLWKSGQRDKAREVWRAAQKLEPDNDTLVSTLKRFGVNGL

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011717
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR013105
- InterPro:   IPR019734 [H]

Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]

EC number: NA

Molecular weight: Translated: 66840; Mature: 66709

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPSTLSPKRSAARARRAFAFPVRRALGAALVAAWTFGAVAAHAQTPADAPAAGASDAL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
AQSAFSPAFPEEKKDLPNVPLTAQIVYQVLAAEVALQRSQPAPAYQTYLALARDTKDPRM
HHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHH
AQRATEIALAAQSPADALAAANLWRQFAPDSNRASQVDSALLVLAGKPAEAEPLLARELA
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHCEEEEEECCCCCCCHHHHHHHH
RANGENRGDALLALQALISRGPNRVEGLTVLQDLLKNDLDRPEAQLAIARQQLATDDRAG
HHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHH
AVASLKQALKLRPDYLPAALMLSQMGPDERAVGVASFEKFVQQNPKSREGRLALAQLYLA
HHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
DNRLEDAQKQFEAMRRNDPKEPAPLMALALVKIQEKHYDDAQADLKQYIELAQKRQGADV
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCH
GQAYVYLAQIAIEQNDDAQASQWLDKIDASSPHYIPAQVTRAQLLAKQGKTDEARQVLAG
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHC
IQVSDPHDAAVIARTDASLLFAAKRYREAADRLAQAVEQFPDDPDLRYDYAMACEKIGQY
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
TTMEQQLRLLISAQPDSPQAYNALGYSLADRNERLPEANKLIERASALAPKDAFIMDSLG
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHCCC
WVKYRLGDNAAAAKILTQAYALQPNAEIGAHLGEVLWKSGQRDKAREVWRAAQKLEPDND
CEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCH
TLVSTLKRFGVNGL
HHHHHHHHHCCCCC
>Mature Secondary Structure 
TLPSTLSPKRSAARARRAFAFPVRRALGAALVAAWTFGAVAAHAQTPADAPAAGASDAL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
AQSAFSPAFPEEKKDLPNVPLTAQIVYQVLAAEVALQRSQPAPAYQTYLALARDTKDPRM
HHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHH
AQRATEIALAAQSPADALAAANLWRQFAPDSNRASQVDSALLVLAGKPAEAEPLLARELA
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHCEEEEEECCCCCCCHHHHHHHH
RANGENRGDALLALQALISRGPNRVEGLTVLQDLLKNDLDRPEAQLAIARQQLATDDRAG
HHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHH
AVASLKQALKLRPDYLPAALMLSQMGPDERAVGVASFEKFVQQNPKSREGRLALAQLYLA
HHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
DNRLEDAQKQFEAMRRNDPKEPAPLMALALVKIQEKHYDDAQADLKQYIELAQKRQGADV
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCH
GQAYVYLAQIAIEQNDDAQASQWLDKIDASSPHYIPAQVTRAQLLAKQGKTDEARQVLAG
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHC
IQVSDPHDAAVIARTDASLLFAAKRYREAADRLAQAVEQFPDDPDLRYDYAMACEKIGQY
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
TTMEQQLRLLISAQPDSPQAYNALGYSLADRNERLPEANKLIERASALAPKDAFIMDSLG
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHCCC
WVKYRLGDNAAAAKILTQAYALQPNAEIGAHLGEVLWKSGQRDKAREVWRAAQKLEPDND
CEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCH
TLVSTLKRFGVNGL
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7883699; 10984043 [H]