| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238028621
Identifier: 238028621
GI number: 238028621
Start: 3505494
End: 3505940
Strand: Reverse
Name: 238028621
Synonym: bglu_1g30850
Alternate gene names: NA
Gene position: 3505940-3505494 (Counterclockwise)
Preceding gene: 238028622
Following gene: 238028620
Centisome position: 89.75
GC content: 65.77
Gene sequence:
>447_bases ATGGATTGCGTATTCTGCCGCGAGGACGGGGGCGAGCTGCTCTGGAAGGACGACCTGCTGCGCGTCGTGCTCGCCACCAC GGAGACCGATTACCCGGGTTTCTGCCGCGTCATCTGGCAGACCCACGTGGCCGAGTTCTCCGATCTCGACGAGCCCGCGC GCATGCATCTGATGCGCGTCGTGGCCGCCGTCGAGCGGGCCGTGCGCCGCGTGATGCAACCTGATAAGGTGAATCTCGCG AGCCTCGGCAACCAGGTGCCGCATCTGCACTGGCATGTGATTCCGCGCTTCTCGAACGACGCGCATTTTCCCCAGGCGGT CTGGGCGCCGCGTCAGCGCTCGGTGTCCGACGCGCTGCTGCGGCTGCGCGCGGCCCAGGCCACGCTGCTGCACAATGCGG TCCACGAGGCAATCGAACAGGCTTTGAACACGAGGCATTCTTCATGA
Upstream 100 bases:
>100_bases CGAGAACTGGATGGCCGACTATGTGGCGCGCGCCAACCACGGCGGGATCGAGCGCGTGCTGGTGTAAATTCGGAGGCGTC CGACCTGTAAGGAATTGACG
Downstream 100 bases:
>100_bases GCGGCTTGACCCCGGCCACGCCGATTCCGTCGGGCGTGGTCGTCCACGCGGTATCGCGCGTGCTCGAATTGCAATATCCG AACGGCGAGAACTATCGCGT
Product: HIT domain-containing protein
Products: NA
Alternate protein names: Histidine Triad Family Protein; HIT Family Hydrolase; HIT Family Protein; Diadenosine Tetraphosphate Hydrolase; Histidine Triad-Like; HIT Domain-Containing Protein; HIT Domain-Containing
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MDCVFCREDGGELLWKDDLLRVVLATTETDYPGFCRVIWQTHVAEFSDLDEPARMHLMRVVAAVERAVRRVMQPDKVNLA SLGNQVPHLHWHVIPRFSNDAHFPQAVWAPRQRSVSDALLRLRAAQATLLHNAVHEAIEQALNTRHSS
Sequences:
>Translated_148_residues MDCVFCREDGGELLWKDDLLRVVLATTETDYPGFCRVIWQTHVAEFSDLDEPARMHLMRVVAAVERAVRRVMQPDKVNLA SLGNQVPHLHWHVIPRFSNDAHFPQAVWAPRQRSVSDALLRLRAAQATLLHNAVHEAIEQALNTRHSS >Mature_148_residues MDCVFCREDGGELLWKDDLLRVVLATTETDYPGFCRVIWQTHVAEFSDLDEPARMHLMRVVAAVERAVRRVMQPDKVNLA SLGNQVPHLHWHVIPRFSNDAHFPQAVWAPRQRSVSDALLRLRAAQATLLHNAVHEAIEQALNTRHSS
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16893; Mature: 16893
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDCVFCREDGGELLWKDDLLRVVLATTETDYPGFCRVIWQTHVAEFSDLDEPARMHLMRV CCCEEEECCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH VAAVERAVRRVMQPDKVNLASLGNQVPHLHWHVIPRFSNDAHFPQAVWAPRQRSVSDALL HHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCCCHHHCCCCCCCHHHHHH RLRAAQATLLHNAVHEAIEQALNTRHSS HHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDCVFCREDGGELLWKDDLLRVVLATTETDYPGFCRVIWQTHVAEFSDLDEPARMHLMRV CCCEEEECCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH VAAVERAVRRVMQPDKVNLASLGNQVPHLHWHVIPRFSNDAHFPQAVWAPRQRSVSDALL HHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCCCHHHCCCCCCCHHHHHH RLRAAQATLLHNAVHEAIEQALNTRHSS HHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA