| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028620
Identifier: 238028620
GI number: 238028620
Start: 3505084
End: 3505497
Strand: Reverse
Name: 238028620
Synonym: bglu_1g30840
Alternate gene names: NA
Gene position: 3505497-3505084 (Counterclockwise)
Preceding gene: 238028621
Following gene: 238028619
Centisome position: 89.73
GC content: 69.32
Gene sequence:
>414_bases ATGAGCGGCTTGACCCCGGCCACGCCGATTCCGTCGGGCGTGGTCGTCCACGCGGTATCGCGCGTGCTCGAATTGCAATA TCCGAACGGCGAGAACTATCGCGTGCCGTTCGAACTGCTGCGGGTCTTCTCGCCCTCGGCCGAGGTCCGCGGCCACGGCC CCGGGCAGGAAATCCTGCAGACCGGCAAGCGCGGCGTGACCATCACGGCGCTCGAGGGCGTAGGCCACTACGCGCTGCAG CCGACCTTCTCCGACGGCCACTCCACCGGCATCTACTCGTGGGACCTGCTGTACGAACTCGCCACGCGCCAGGACGCGCT CTGGCGCGAGTACTTCGACAAGCTGCAGGCGGCCGGCGTCGACCGCGACGCGCCGATGCCCGCCGCCGGCGGCCAGAGCG GTCACTGTCACTGA
Upstream 100 bases:
>100_bases TGTCCGACGCGCTGCTGCGGCTGCGCGCGGCCCAGGCCACGCTGCTGCACAATGCGGTCCACGAGGCAATCGAACAGGCT TTGAACACGAGGCATTCTTC
Downstream 100 bases:
>100_bases CTACCGATTGATCCGACGGCGCCCTCCTGGCGCCGTCTTGCCATTTCCAGAGGATTCACGCGATGAGCAAAACCCACTTC GGCTTCGAGACCGTCGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSGLTPATPIPSGVVVHAVSRVLELQYPNGENYRVPFELLRVFSPSAEVRGHGPGQEILQTGKRGVTITALEGVGHYALQ PTFSDGHSTGIYSWDLLYELATRQDALWREYFDKLQAAGVDRDAPMPAAGGQSGHCH
Sequences:
>Translated_137_residues MSGLTPATPIPSGVVVHAVSRVLELQYPNGENYRVPFELLRVFSPSAEVRGHGPGQEILQTGKRGVTITALEGVGHYALQ PTFSDGHSTGIYSWDLLYELATRQDALWREYFDKLQAAGVDRDAPMPAAGGQSGHCH >Mature_136_residues SGLTPATPIPSGVVVHAVSRVLELQYPNGENYRVPFELLRVFSPSAEVRGHGPGQEILQTGKRGVTITALEGVGHYALQP TFSDGHSTGIYSWDLLYELATRQDALWREYFDKLQAAGVDRDAPMPAAGGQSGHCH
Specific function: Unknown
COG id: COG3536
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14845; Mature: 14714
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLTPATPIPSGVVVHAVSRVLELQYPNGENYRVPFELLRVFSPSAEVRGHGPGQEILQ CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHH TGKRGVTITALEGVGHYALQPTFSDGHSTGIYSWDLLYELATRQDALWREYFDKLQAAGV CCCCCEEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC DRDAPMPAAGGQSGHCH CCCCCCCCCCCCCCCCC >Mature Secondary Structure SGLTPATPIPSGVVVHAVSRVLELQYPNGENYRVPFELLRVFSPSAEVRGHGPGQEILQ CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHH TGKRGVTITALEGVGHYALQPTFSDGHSTGIYSWDLLYELATRQDALWREYFDKLQAAGV CCCCCEEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC DRDAPMPAAGGQSGHCH CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA