| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is plsC [H]
Identifier: 238028592
GI number: 238028592
Start: 3473440
End: 3474186
Strand: Direct
Name: plsC [H]
Synonym: bglu_1g30560
Alternate gene names: 238028592
Gene position: 3473440-3474186 (Clockwise)
Preceding gene: 238028591
Following gene: 238028593
Centisome position: 88.91
GC content: 67.07
Gene sequence:
>747_bases ATGCGCCTCCTCCGTTCGCTGCTGCTGCTGATCTTCTTCGTGCTGTACACGGTGCCCTACGCCACCGCCTGTTTCATCGC GTTCCCGTTCCTGCGTCCCGACGCGCGCTACTGGATGGCGGCGGGCTGGTGCCGCTCCACGCTCGCGGTGACGCGCTGGC TGAACGGCATCCGCTACCGCATCGAGGGCTTCGAGAACCTGCCCGACGGGCCGGCCGTGCTGCTCTCGAAACACCAGTCG GCGTGGGAGACGCTCGCGTTTCCGGCACTGATGCCGCGCCCGCTCTGCTACGTGTTCAAGCGCGAGCTGCTCTACGTGCC GTTCTTCGGCTGGGCGCTCGGGCTGCTGCACATGGTCCACATCAACCGCAGCGAAGGCAAGAACGCATTCGACTCGGTGA TCCGGCAGGGCAAGAAGCGCCTCGCCGAGGGCGCCTGGGTGATCATGTTCCCGGAAGGCACGCGCACCCCCACCGGCAGC CAGGGCAAGTACAAGACGGGCGGCGTGCGCTTCGCGGTGGGCACCGGCGCGCCGGTGGTGCCGATCGCCCATAATGCGGG GCGCGTGTGGCCGCGCAATTCGTTCATCAAGTATCCGGGTATAGTCACGGTGTCGATCGGTAAGCCGATCGATTCGCGCG GCCTCACCCCGGAGGAGCTGAATGCGCGCGTCGAGCAGTGGATCGAGACGGAAATGCGCCGCATCGATCCCGACGCCTAT CGAGGCGCAAGCGGCGAGCGCCGCTGA
Upstream 100 bases:
>100_bases CTGCGCGCCTTCGCGCTCGATTTCCTGTCCCGTGAGCCGGCCTGAGGGGGCATCCGCCGCCGCCCGCCGCCCCCTCCCCA CCCCCGAGCCCCCGACTCCG
Downstream 100 bases:
>100_bases CGATGCCCGGCCGGAGCCCGCCGCACGACCCCGATTCAAGGTTTCATTCATATTGCGCACCGCCAAACGAAGCGAACTGA TGCCCAAGCGTCCCAGGCCA
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MRLLRSLLLLIFFVLYTVPYATACFIAFPFLRPDARYWMAAGWCRSTLAVTRWLNGIRYRIEGFENLPDGPAVLLSKHQS AWETLAFPALMPRPLCYVFKRELLYVPFFGWALGLLHMVHINRSEGKNAFDSVIRQGKKRLAEGAWVIMFPEGTRTPTGS QGKYKTGGVRFAVGTGAPVVPIAHNAGRVWPRNSFIKYPGIVTVSIGKPIDSRGLTPEELNARVEQWIETEMRRIDPDAY RGASGERR
Sequences:
>Translated_248_residues MRLLRSLLLLIFFVLYTVPYATACFIAFPFLRPDARYWMAAGWCRSTLAVTRWLNGIRYRIEGFENLPDGPAVLLSKHQS AWETLAFPALMPRPLCYVFKRELLYVPFFGWALGLLHMVHINRSEGKNAFDSVIRQGKKRLAEGAWVIMFPEGTRTPTGS QGKYKTGGVRFAVGTGAPVVPIAHNAGRVWPRNSFIKYPGIVTVSIGKPIDSRGLTPEELNARVEQWIETEMRRIDPDAY RGASGERR >Mature_248_residues MRLLRSLLLLIFFVLYTVPYATACFIAFPFLRPDARYWMAAGWCRSTLAVTRWLNGIRYRIEGFENLPDGPAVLLSKHQS AWETLAFPALMPRPLCYVFKRELLYVPFFGWALGLLHMVHINRSEGKNAFDSVIRQGKKRLAEGAWVIMFPEGTRTPTGS QGKYKTGGVRFAVGTGAPVVPIAHNAGRVWPRNSFIKYPGIVTVSIGKPIDSRGLTPEELNARVEQWIETEMRRIDPDAY RGASGERR
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI5453718, Length=205, Percent_Identity=29.2682926829268, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI15100175, Length=205, Percent_Identity=29.2682926829268, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI6041665, Length=177, Percent_Identity=27.683615819209, Blast_Score=76, Evalue=3e-14, Organism=Escherichia coli, GI1789395, Length=186, Percent_Identity=28.494623655914, Blast_Score=70, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17564032, Length=238, Percent_Identity=25.2100840336134, Blast_Score=77, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6320151, Length=195, Percent_Identity=27.6923076923077, Blast_Score=77, Evalue=2e-15, Organism=Drosophila melanogaster, GI281364648, Length=244, Percent_Identity=25, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI24582856, Length=244, Percent_Identity=25, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI24582854, Length=244, Percent_Identity=25, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI24641614, Length=233, Percent_Identity=28.3261802575107, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24641612, Length=233, Percent_Identity=28.3261802575107, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 28089; Mature: 28089
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLRSLLLLIFFVLYTVPYATACFIAFPFLRPDARYWMAAGWCRSTLAVTRWLNGIRYR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE IEGFENLPDGPAVLLSKHQSAWETLAFPALMPRPLCYVFKRELLYVPFFGWALGLLHMVH ECCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH INRSEGKNAFDSVIRQGKKRLAEGAWVIMFPEGTRTPTGSQGKYKTGGVRFAVGTGAPVV CCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEECCCEEEEECCCCCEE PIAHNAGRVWPRNSFIKYPGIVTVSIGKPIDSRGLTPEELNARVEQWIETEMRRIDPDAY EEECCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH RGASGERR CCCCCCCC >Mature Secondary Structure MRLLRSLLLLIFFVLYTVPYATACFIAFPFLRPDARYWMAAGWCRSTLAVTRWLNGIRYR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE IEGFENLPDGPAVLLSKHQSAWETLAFPALMPRPLCYVFKRELLYVPFFGWALGLLHMVH ECCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH INRSEGKNAFDSVIRQGKKRLAEGAWVIMFPEGTRTPTGSQGKYKTGGVRFAVGTGAPVV CCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEECCCEEEEECCCCCEE PIAHNAGRVWPRNSFIKYPGIVTVSIGKPIDSRGLTPEELNARVEQWIETEMRRIDPDAY EEECCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH RGASGERR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9403685; 7812434 [H]