| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yieH [H]
Identifier: 238028580
GI number: 238028580
Start: 3458871
End: 3459557
Strand: Direct
Name: yieH [H]
Synonym: bglu_1g30440
Alternate gene names: 238028580
Gene position: 3458871-3459557 (Clockwise)
Preceding gene: 238028579
Following gene: 238028582
Centisome position: 88.54
GC content: 71.03
Gene sequence:
>687_bases ATGCTCGACCATCTGATCTGCGACTGCGACGGCGTGCTCGTCGACAGTGAAGTGATCGCCGACCGCGTGCTGCTCGACGT GCTCGGCGCCACGTTTCCCTCGCTCGATTTCAGCGCCGACGCGGCCGCCGCGTTCGGCCAGAAGACCTCGCTGTTTCTCG CCTCGGTCGAGGCGCGCCACGGCATCCGCATGCCGGAAGGCTTCGTCGCCACCATCGATCGCGCCACCGAGGCCGAACTC GCGCGCACGCTCGCGCCGATCGCGGGGGTGCGCGACGCGCTGCTGCGCATCCCGCTGCCGGCCGCCGTGGTATCCAACGC ACGCGGCGAACGCGTGCGCAACTCGCTCGCGCGCGCCGCGCTCACCGACGTGTTCGGCGAACGCGTGTTCAGCGCCGACC AGGTGGCGCGGCCGAAGCCCTACCCCGACGTCTATCTGCTCGCCGCGCGCACGCTCGGCGTCGAACCGGCGCGCTGCGTG GTGGTGGAGGACAGCCTGTCGGGGCTGACCGCCGCGCGCGCGGCCGGCATGAAGACGATCGCGTTCGTCGGCGCGAGCCA CATTCCGGATGGTTACGAGAGCGTGCTGCGCGCGACCGGCATCACGCGGATCGTGCGCAGCATGCGCGAATTGCCGGCGC TCGTGGAGGCCGGCATGCGCGGCGAATTCGGCGACGTGCAATCGTAG
Upstream 100 bases:
>100_bases GTGCCTGCGCGGCGCGCGCGGGCTGCCCGGGCCGCGCCGCGAAAGCACGTATGATGGCGATTCGCCCAACTCAGCGATTG TCCGCGCCCTGCCGCTTGCC
Downstream 100 bases:
>100_bases CGGCAGCCCGCCCGGCGGCGCGAACCGCCGCCCGCCCTATTGCGGCAGATCCCAGCGCGGCGGCACTTCCGCGTTGATCG TGACGCGGAACGCGCGCGCC
Product: HAD-superfamily hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MLDHLICDCDGVLVDSEVIADRVLLDVLGATFPSLDFSADAAAAFGQKTSLFLASVEARHGIRMPEGFVATIDRATEAEL ARTLAPIAGVRDALLRIPLPAAVVSNARGERVRNSLARAALTDVFGERVFSADQVARPKPYPDVYLLAARTLGVEPARCV VVEDSLSGLTAARAAGMKTIAFVGASHIPDGYESVLRATGITRIVRSMRELPALVEAGMRGEFGDVQS
Sequences:
>Translated_228_residues MLDHLICDCDGVLVDSEVIADRVLLDVLGATFPSLDFSADAAAAFGQKTSLFLASVEARHGIRMPEGFVATIDRATEAEL ARTLAPIAGVRDALLRIPLPAAVVSNARGERVRNSLARAALTDVFGERVFSADQVARPKPYPDVYLLAARTLGVEPARCV VVEDSLSGLTAARAAGMKTIAFVGASHIPDGYESVLRATGITRIVRSMRELPALVEAGMRGEFGDVQS >Mature_228_residues MLDHLICDCDGVLVDSEVIADRVLLDVLGATFPSLDFSADAAAAFGQKTSLFLASVEARHGIRMPEGFVATIDRATEAEL ARTLAPIAGVRDALLRIPLPAAVVSNARGERVRNSLARAALTDVFGERVFSADQVARPKPYPDVYLLAARTLGVEPARCV VVEDSLSGLTAARAAGMKTIAFVGASHIPDGYESVLRATGITRIVRSMRELPALVEAGMRGEFGDVQS
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=185, Percent_Identity=29.7297297297297, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789046, Length=179, Percent_Identity=30.7262569832402, Blast_Score=67, Evalue=7e-13, Organism=Escherichia coli, GI1788021, Length=182, Percent_Identity=32.4175824175824, Blast_Score=67, Evalue=1e-12, Organism=Drosophila melanogaster, GI20129151, Length=227, Percent_Identity=29.0748898678414, Blast_Score=75, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24161; Mature: 24161
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDHLICDCDGVLVDSEVIADRVLLDVLGATFPSLDFSADAAAAFGQKTSLFLASVEARH CCCCEEECCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHC GIRMPEGFVATIDRATEAELARTLAPIAGVRDALLRIPLPAAVVSNARGERVRNSLARAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHH LTDVFGERVFSADQVARPKPYPDVYLLAARTLGVEPARCVVVEDSLSGLTAARAAGMKTI HHHHHHHHHHCHHHHCCCCCCCCEEEEEHHHCCCCCCEEEEEECCHHHHHHHHHHCCHHH AFVGASHIPDGYESVLRATGITRIVRSMRELPALVEAGMRGEFGDVQS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLDHLICDCDGVLVDSEVIADRVLLDVLGATFPSLDFSADAAAAFGQKTSLFLASVEARH CCCCEEECCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHC GIRMPEGFVATIDRATEAELARTLAPIAGVRDALLRIPLPAAVVSNARGERVRNSLARAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHH LTDVFGERVFSADQVARPKPYPDVYLLAARTLGVEPARCVVVEDSLSGLTAARAAGMKTI HHHHHHHHHHCHHHHCCCCCCCCEEEEEHHHCCCCCCEEEEEECCHHHHHHHHHHCCHHH AFVGASHIPDGYESVLRATGITRIVRSMRELPALVEAGMRGEFGDVQS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]