| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is ywrD [H]
Identifier: 238028573
GI number: 238028573
Start: 3450780
End: 3452420
Strand: Reverse
Name: ywrD [H]
Synonym: bglu_1g30370
Alternate gene names: 238028573
Gene position: 3452420-3450780 (Counterclockwise)
Preceding gene: 238028576
Following gene: 238028572
Centisome position: 88.38
GC content: 73.61
Gene sequence:
>1641_bases ATGACCCGCTTCAACTGGCAGAACCCCTATCCCACCGTCCGGCAGCCCGTGTTCGCCCGCAATCTGGTCTCGACCTCGCA CCCGCTCGCCGCGCAGGCCGGCCTGCGCATGCTCTGGCAGGGCGGCAACGCGGTGGACGCGGCGCTCGCCGCCGCCGCCG CGCTCACCGTCGTCGAGCCGGTCTCGTGCGGACTCGGCGGCGACGCGTTCGCGCTGGTCTGGGACGGGGCGACGCTGTCG GGCCTCAACGCCTCGGGCGTCGCGCCCGCGGCCTGGAACCCGGACTATTTCCGCCGCCGCCATGGCGAGGACGGCAACGG CCACGCGCGGCAGCCCGAGCGCGGCTGGGATACGGTGACGGTGCCGGGCGTGGTCGCGGGCTGGGAGGCGCTGCACGCGC GCTTCGGCTCGCTGCCGTTCGCCGACCTGCTCGCGCCGGCCATCGAACTGGCCGAGCGCGGTCATGCGGTGGCCTCGATC GTGGCCCAGAAGTGGGCTGCCGCGGTGCCGGCGCTGCACGACCAGCCCGGCTTCGCGGCGGCGTTCCTGCCGCGCTCACG CGCGCCGGAGGTGGGCGAGCGGGTGGTGATGCCAGGCCACGCCCGCACGCTGCGGCTGCTCGCGCGCGACGGCGCGCGCG CCTTCTACGAGGGCGAGCCGGGCGCGGCGCTGGCCGCGTTCGCGCGCGAGACGGGCGGCGCGCTGACGGCCGAGGACCTG CGGGCCTGGCGCCCCGAGTGGGTCGAGCCGATCGGCAAGTCGTTTCGCGGCCACACGGTGCACGAGATCCCGCCGAACGG GCAGGGCATCGCGGCGCTGATCGCGCTCGGCATCGTCGAGCGCTTCGACCTGGCCGGGCTGCCGCTCGATTCGCCCGAGG CGCAGCACGTGCAGATCGAGGCCATGAAGCTCGCGTTCGCCGACGTCTACCGCTACGTGGCCGATCCGCGCGCGATGGAG GTGACGCCCGAGGCGATGCTCGACGATGCCTACCTGGCCGAGCGGGCGAAGCGCATCAACCTGTCGCGCGCGACGCATGT CGAGCACGGCAGGCCGCGCGCGGGCGGCACCGTCTACCTGTCGGCTGCCGACGAGCGCGGCATGATGGTGAGCTTCATCC AGTCGAACTACATGGGCTTCGGCTCGGGCCTGGTGGTGCCCGGCTACGGGATCGCGCTGCAGAACCGCGGCCACGGGTTC TCGATGGACCCGGCCTCGCCGAACGTGGTGGCGGGCGGCAAGCGGCCGTTCCATACCATCATCCCGGCCTTCGTCACGCG CGAGCGCGACGGCCGCCGCGAGGCGGTGATGAGCTTCGGCGTGATGGGCGGCGACATGCAGCCGCAAGGACACCTGCAGA CCCTCGTGCGCATGCTCGGCTATGGGCAGCAGCCGCAGGCCGCCTGCGACGCGCCGCGCTGGAAGGTGAACCGCGATTTC ACGCTCGACGTCGAGCACACCCTCGACCGCGGCGTGGTGGCCGCGCTCGAGGCGCGCGGCCACCGGCTGCAGTCGATCGC CGATCCCTACATGGACTTCGGCTCGGGCCAGTTCATCTGGCGGCTCGACGCCGACGATCCCGAGCGCGGCTACGTGGCCG CCAGCGACAGCCGTCGCGACGGGCTCGCGGCCGGCTTCTGA
Upstream 100 bases:
>100_bases GCTGCAATGGCGCTTTGTCGCCTGCGGCAATCGCTTGCCTTGCCGCGCGCCCTTTCTGTTGTCGGCCGTGTTCGCACGTC CATTCCACCGGAGCCGCAGC
Downstream 100 bases:
>100_bases GCGCGGCCGCGTGTCGCGTCCCGGCCGCATCGGCGCGCGGCGCTGCCCCGCCGCGCGCGCGCGGGGCCTGCGGCATGCGC GCCCGGTGCCGCCTGGTCCG
Product: Gamma-glutamyltransferase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 546; Mature: 545
Protein sequence:
>546_residues MTRFNWQNPYPTVRQPVFARNLVSTSHPLAAQAGLRMLWQGGNAVDAALAAAAALTVVEPVSCGLGGDAFALVWDGATLS GLNASGVAPAAWNPDYFRRRHGEDGNGHARQPERGWDTVTVPGVVAGWEALHARFGSLPFADLLAPAIELAERGHAVASI VAQKWAAAVPALHDQPGFAAAFLPRSRAPEVGERVVMPGHARTLRLLARDGARAFYEGEPGAALAAFARETGGALTAEDL RAWRPEWVEPIGKSFRGHTVHEIPPNGQGIAALIALGIVERFDLAGLPLDSPEAQHVQIEAMKLAFADVYRYVADPRAME VTPEAMLDDAYLAERAKRINLSRATHVEHGRPRAGGTVYLSAADERGMMVSFIQSNYMGFGSGLVVPGYGIALQNRGHGF SMDPASPNVVAGGKRPFHTIIPAFVTRERDGRREAVMSFGVMGGDMQPQGHLQTLVRMLGYGQQPQAACDAPRWKVNRDF TLDVEHTLDRGVVAALEARGHRLQSIADPYMDFGSGQFIWRLDADDPERGYVAASDSRRDGLAAGF
Sequences:
>Translated_546_residues MTRFNWQNPYPTVRQPVFARNLVSTSHPLAAQAGLRMLWQGGNAVDAALAAAAALTVVEPVSCGLGGDAFALVWDGATLS GLNASGVAPAAWNPDYFRRRHGEDGNGHARQPERGWDTVTVPGVVAGWEALHARFGSLPFADLLAPAIELAERGHAVASI VAQKWAAAVPALHDQPGFAAAFLPRSRAPEVGERVVMPGHARTLRLLARDGARAFYEGEPGAALAAFARETGGALTAEDL RAWRPEWVEPIGKSFRGHTVHEIPPNGQGIAALIALGIVERFDLAGLPLDSPEAQHVQIEAMKLAFADVYRYVADPRAME VTPEAMLDDAYLAERAKRINLSRATHVEHGRPRAGGTVYLSAADERGMMVSFIQSNYMGFGSGLVVPGYGIALQNRGHGF SMDPASPNVVAGGKRPFHTIIPAFVTRERDGRREAVMSFGVMGGDMQPQGHLQTLVRMLGYGQQPQAACDAPRWKVNRDF TLDVEHTLDRGVVAALEARGHRLQSIADPYMDFGSGQFIWRLDADDPERGYVAASDSRRDGLAAGF >Mature_545_residues TRFNWQNPYPTVRQPVFARNLVSTSHPLAAQAGLRMLWQGGNAVDAALAAAAALTVVEPVSCGLGGDAFALVWDGATLSG LNASGVAPAAWNPDYFRRRHGEDGNGHARQPERGWDTVTVPGVVAGWEALHARFGSLPFADLLAPAIELAERGHAVASIV AQKWAAAVPALHDQPGFAAAFLPRSRAPEVGERVVMPGHARTLRLLARDGARAFYEGEPGAALAAFARETGGALTAEDLR AWRPEWVEPIGKSFRGHTVHEIPPNGQGIAALIALGIVERFDLAGLPLDSPEAQHVQIEAMKLAFADVYRYVADPRAMEV TPEAMLDDAYLAERAKRINLSRATHVEHGRPRAGGTVYLSAADERGMMVSFIQSNYMGFGSGLVVPGYGIALQNRGHGFS MDPASPNVVAGGKRPFHTIIPAFVTRERDGRREAVMSFGVMGGDMQPQGHLQTLVRMLGYGQQPQAACDAPRWKVNRDFT LDVEHTLDRGVVAALEARGHRLQSIADPYMDFGSGQFIWRLDADDPERGYVAASDSRRDGLAAGF
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=557, Percent_Identity=29.6229802513465, Blast_Score=180, Evalue=4e-45, Organism=Homo sapiens, GI73915090, Length=557, Percent_Identity=29.6229802513465, Blast_Score=180, Evalue=4e-45, Organism=Homo sapiens, GI73915096, Length=557, Percent_Identity=29.6229802513465, Blast_Score=180, Evalue=4e-45, Organism=Homo sapiens, GI73915094, Length=557, Percent_Identity=29.6229802513465, Blast_Score=180, Evalue=4e-45, Organism=Homo sapiens, GI113429324, Length=556, Percent_Identity=28.4172661870504, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI113429326, Length=561, Percent_Identity=28.1639928698752, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI109148539, Length=517, Percent_Identity=29.4003868471954, Blast_Score=127, Evalue=4e-29, Organism=Homo sapiens, GI153266885, Length=555, Percent_Identity=25.5855855855856, Blast_Score=126, Evalue=5e-29, Organism=Homo sapiens, GI153266901, Length=556, Percent_Identity=25.7194244604317, Blast_Score=123, Evalue=5e-28, Organism=Homo sapiens, GI153266907, Length=553, Percent_Identity=24.4122965641953, Blast_Score=113, Evalue=4e-25, Organism=Escherichia coli, GI1789856, Length=561, Percent_Identity=29.4117647058824, Blast_Score=192, Evalue=4e-50, Organism=Caenorhabditis elegans, GI72000294, Length=529, Percent_Identity=24.952741020794, Blast_Score=123, Evalue=3e-28, Organism=Caenorhabditis elegans, GI212646519, Length=529, Percent_Identity=24.952741020794, Blast_Score=123, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17542894, Length=524, Percent_Identity=25.381679389313, Blast_Score=120, Evalue=3e-27, Organism=Caenorhabditis elegans, GI193208245, Length=510, Percent_Identity=24.9019607843137, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI193208247, Length=510, Percent_Identity=24.9019607843137, Blast_Score=116, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17506189, Length=532, Percent_Identity=23.1203007518797, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI24642670, Length=563, Percent_Identity=25.5772646536412, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24642666, Length=563, Percent_Identity=25.5772646536412, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI45551474, Length=563, Percent_Identity=25.3996447602131, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI161077878, Length=563, Percent_Identity=25.3996447602131, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI161077880, Length=563, Percent_Identity=25.3996447602131, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI18859893, Length=520, Percent_Identity=26.1538461538462, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI18859741, Length=522, Percent_Identity=26.6283524904215, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI161077496, Length=512, Percent_Identity=25.5859375, Blast_Score=106, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 58778; Mature: 58647
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFNWQNPYPTVRQPVFARNLVSTSHPLAAQAGLRMLWQGGNAVDAALAAAAALTVVEP CCCCCCCCCCCHHHCCHHHHHHHHCCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHH VSCGLGGDAFALVWDGATLSGLNASGVAPAAWNPDYFRRRHGEDGNGHARQPERGWDTVT HHCCCCCCEEEEEECCCEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEE VPGVVAGWEALHARFGSLPFADLLAPAIELAERGHAVASIVAQKWAAAVPALHDQPGFAA CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEE AFLPRSRAPEVGERVVMPGHARTLRLLARDGARAFYEGEPGAALAAFARETGGALTAEDL EECCCCCCCCCCCEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCCHHHH RAWRPEWVEPIGKSFRGHTVHEIPPNGQGIAALIALGIVERFDLAGLPLDSPEAQHVQIE HHCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHH AMKLAFADVYRYVADPRAMEVTPEAMLDDAYLAERAKRINLSRATHVEHGRPRAGGTVYL HHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEE SAADERGMMVSFIQSNYMGFGSGLVVPGYGIALQNRGHGFSMDPASPNVVAGGKRPFHTI EECCCCCCCCEEHHHCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCEEECCCCCHHHH IPAFVTRERDGRREAVMSFGVMGGDMQPQGHLQTLVRMLGYGQQPQAACDAPRWKVNRDF HHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCEECCCCE TLDVEHTLDRGVVAALEARGHRLQSIADPYMDFGSGQFIWRLDADDPERGYVAASDSRRD EEEHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCC GLAAGF CCCCCC >Mature Secondary Structure TRFNWQNPYPTVRQPVFARNLVSTSHPLAAQAGLRMLWQGGNAVDAALAAAAALTVVEP CCCCCCCCCCHHHCCHHHHHHHHCCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHH VSCGLGGDAFALVWDGATLSGLNASGVAPAAWNPDYFRRRHGEDGNGHARQPERGWDTVT HHCCCCCCEEEEEECCCEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEE VPGVVAGWEALHARFGSLPFADLLAPAIELAERGHAVASIVAQKWAAAVPALHDQPGFAA CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEE AFLPRSRAPEVGERVVMPGHARTLRLLARDGARAFYEGEPGAALAAFARETGGALTAEDL EECCCCCCCCCCCEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCCHHHH RAWRPEWVEPIGKSFRGHTVHEIPPNGQGIAALIALGIVERFDLAGLPLDSPEAQHVQIE HHCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHH AMKLAFADVYRYVADPRAMEVTPEAMLDDAYLAERAKRINLSRATHVEHGRPRAGGTVYL HHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEE SAADERGMMVSFIQSNYMGFGSGLVVPGYGIALQNRGHGFSMDPASPNVVAGGKRPFHTI EECCCCCCCCEEHHHCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCEEECCCCCHHHH IPAFVTRERDGRREAVMSFGVMGGDMQPQGHLQTLVRMLGYGQQPQAACDAPRWKVNRDF HHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCEECCCCE TLDVEHTLDRGVVAALEARGHRLQSIADPYMDFGSGQFIWRLDADDPERGYVAASDSRRD EEEHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCC GLAAGF CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]