| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028576
Identifier: 238028576
GI number: 238028576
Start: 3454159
End: 3454521
Strand: Reverse
Name: 238028576
Synonym: bglu_1g30400
Alternate gene names: NA
Gene position: 3454521-3454159 (Counterclockwise)
Preceding gene: 238028581
Following gene: 238028573
Centisome position: 88.43
GC content: 74.1
Gene sequence:
>363_bases ATGCGTCAGATCATGCTGGCGGGAGCGTTCGCGCTGCTGGCGGGATGCGCGGGAATGCCGAGCTTCGGCCCCGGCCCGTC GCTCGATGCGCTGCAGCGCGCCTGCGGCGAGCCGCACGACTATGGCGGCGACGCTCCGGCCGTCCAGGCCGCGTTGCAGG ACGCCTGGGTGGCCCAGCGCCACCGCGGGCTCATGCAGGCGCAGTATTGCGGGTTCGCGAACGCGCTCGCGGCGCACCAT GCGGCGCTCGGCGCCCGGCCCGGCGCCGCCGCGCGGGAGCAGTGGGTGAATTATCTGAACGAGCAGCGCGCGCAGGCGAT CAGCTGGCGCTCACGGGTCGATCCGACGCTGCGCGGCGGCTGA
Upstream 100 bases:
>100_bases GTTTAAGCAGGGCGGGAACCGGAGGGCGGTTGCGGCGCGGCATGGCGCGCGCCGCGATCCCGAACGATACTGGCGGAATT GTCGACACCGAGGAGGGAAC
Downstream 100 bases:
>100_bases GCCGCGCAGCGCGCCGGCTGGCGGGGGGCGCCGATCGGGCGCGACGCGCCTGGGCGGCCCGTGCGCCGTGCCACGCCGAC GAGGGCGCCACCAAGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MRQIMLAGAFALLAGCAGMPSFGPGPSLDALQRACGEPHDYGGDAPAVQAALQDAWVAQRHRGLMQAQYCGFANALAAHH AALGARPGAAAREQWVNYLNEQRAQAISWRSRVDPTLRGG
Sequences:
>Translated_120_residues MRQIMLAGAFALLAGCAGMPSFGPGPSLDALQRACGEPHDYGGDAPAVQAALQDAWVAQRHRGLMQAQYCGFANALAAHH AALGARPGAAAREQWVNYLNEQRAQAISWRSRVDPTLRGG >Mature_120_residues MRQIMLAGAFALLAGCAGMPSFGPGPSLDALQRACGEPHDYGGDAPAVQAALQDAWVAQRHRGLMQAQYCGFANALAAHH AALGARPGAAAREQWVNYLNEQRAQAISWRSRVDPTLRGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12682; Mature: 12682
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQIMLAGAFALLAGCAGMPSFGPGPSLDALQRACGEPHDYGGDAPAVQAALQDAWVAQR CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH HRGLMQAQYCGFANALAAHHAALGARPGAAAREQWVNYLNEQRAQAISWRSRVDPTLRGG HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRQIMLAGAFALLAGCAGMPSFGPGPSLDALQRACGEPHDYGGDAPAVQAALQDAWVAQR CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH HRGLMQAQYCGFANALAAHHAALGARPGAAAREQWVNYLNEQRAQAISWRSRVDPTLRGG HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA