Click here to switch to the map view.

The map label for this gene is cc4 [H]

Identifier: 238028568

GI number: 238028568

Start: 3445218

End: 3445979

Strand: Direct

Name: cc4 [H]

Synonym: bglu_1g30320

Alternate gene names: 238028568

Gene position: 3445218-3445979 (Clockwise)

Preceding gene: 238028565

Following gene: 238028569

Centisome position: 88.19

GC content: 73.23

Gene sequence:

>762_bases
GTGTCTTCAATGCGTGTCTTCCGTGCCCTGCTGGCCGCCCTGTCGATCGGCGCCGCCTGCCTGCCGCTCCCCTCGCGGGC
CCAGAATCCCCCGTCTCACGCCACCCCGGCCGGCACCGCCGGCGCCGCGCCGCTGAAGGCGCCCGACACCATGGCCGAGC
GCGTGCGCGGCTGCACCGCCTGCCACGGCGCGCAGGGCCAGGGCACCGACAACGACTATTTCCCGCGCCTGGCCGGCAAG
CCCGTCGAGTACCTGTACAACCAGCTGATGAATTTCCGTGACGGGCGGCGCAAGTATCCGCCGATGAACTACCTGCTCAC
CTACCTCAGCGACGACTACCTGCACGAGATCGCCGCCCACTTCTCGAACCTGCGGCCGCCCTATCCGGCGCCGGCCACGC
CGAGCGTGTCCGACGACGTGCTGGCGCGCGGCAAGGCGCTCGCCATGCACGGCGACGCCGCGCGCTCGGTCCCGGCCTGC
GTGGCCTGCCACGGCAGCGCGCTGACCGGCATGCAGCCCGCCATCCCCGGCCTCGTCGGCCTGCACAGCGACTACCTGAG
CGCGCAGCTCGGCGCCTGGCGTTCCGGCAACCGGCGCGCGAAGGCGCCCGACTGCATGCACGAGATCGCCACGCGCCTCA
CCGACGACGACGTGACCGCCGTGACCGCGTGGCTCGCCGCGCAGCCCGCGCCGGCCAATCCGGTGCCGGCTGCGGCCCGC
TCGCTGAAGCTGCCGCTCGCGTGCGGCAGCGAACCGCAATGA

Upstream 100 bases:

>100_bases
GCGCAGCCGACCGGAGATGGGCTGCCGAAACACGTGTAGTCAAAGCCCGAGCCGGCGCAGCCGGCCAGGTCCCCGACGAT
ATAAAAAATTGGAGCCTCTC

Downstream 100 bases:

>100_bases
GACCCAGGAGACAGACGCCATGAAACGCCAGTCCCTGTATGCCTTCTGCGCCGTGCTGCTCGCGGCGGCCGCGACGCTCG
CCCCGGTGTTCTGGCCCGGC

Product: cytochrome c4

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MSSMRVFRALLAALSIGAACLPLPSRAQNPPSHATPAGTAGAAPLKAPDTMAERVRGCTACHGAQGQGTDNDYFPRLAGK
PVEYLYNQLMNFRDGRRKYPPMNYLLTYLSDDYLHEIAAHFSNLRPPYPAPATPSVSDDVLARGKALAMHGDAARSVPAC
VACHGSALTGMQPAIPGLVGLHSDYLSAQLGAWRSGNRRAKAPDCMHEIATRLTDDDVTAVTAWLAAQPAPANPVPAAAR
SLKLPLACGSEPQ

Sequences:

>Translated_253_residues
MSSMRVFRALLAALSIGAACLPLPSRAQNPPSHATPAGTAGAAPLKAPDTMAERVRGCTACHGAQGQGTDNDYFPRLAGK
PVEYLYNQLMNFRDGRRKYPPMNYLLTYLSDDYLHEIAAHFSNLRPPYPAPATPSVSDDVLARGKALAMHGDAARSVPAC
VACHGSALTGMQPAIPGLVGLHSDYLSAQLGAWRSGNRRAKAPDCMHEIATRLTDDDVTAVTAWLAAQPAPANPVPAAAR
SLKLPLACGSEPQ
>Mature_252_residues
SSMRVFRALLAALSIGAACLPLPSRAQNPPSHATPAGTAGAAPLKAPDTMAERVRGCTACHGAQGQGTDNDYFPRLAGKP
VEYLYNQLMNFRDGRRKYPPMNYLLTYLSDDYLHEIAAHFSNLRPPYPAPATPSVSDDVLARGKALAMHGDAARSVPACV
ACHGSALTGMQPAIPGLVGLHSDYLSAQLGAWRSGNRRAKAPDCMHEIATRLTDDDVTAVTAWLAAQPAPANPVPAAARS
LKLPLACGSEPQ

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 26707; Mature: 26575

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSMRVFRALLAALSIGAACLPLPSRAQNPPSHATPAGTAGAAPLKAPDTMAERVRGCTA
CCHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
CHGAQGQGTDNDYFPRLAGKPVEYLYNQLMNFRDGRRKYPPMNYLLTYLSDDYLHEIAAH
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
FSNLRPPYPAPATPSVSDDVLARGKALAMHGDAARSVPACVACHGSALTGMQPAIPGLVG
HHHCCCCCCCCCCCCCCHHHHHCCCEEEECCCHHHCCCHHHHHCCCHHCCCCCCCCHHHH
LHSDYLSAQLGAWRSGNRRAKAPDCMHEIATRLTDDDVTAVTAWLAAQPAPANPVPAAAR
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHH
SLKLPLACGSEPQ
HCCCCCCCCCCCC
>Mature Secondary Structure 
SSMRVFRALLAALSIGAACLPLPSRAQNPPSHATPAGTAGAAPLKAPDTMAERVRGCTA
CHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
CHGAQGQGTDNDYFPRLAGKPVEYLYNQLMNFRDGRRKYPPMNYLLTYLSDDYLHEIAAH
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
FSNLRPPYPAPATPSVSDDVLARGKALAMHGDAARSVPACVACHGSALTGMQPAIPGLVG
HHHCCCCCCCCCCCCCCHHHHHCCCEEEECCCHHHCCCHHHHHCCCHHCCCCCCCCHHHH
LHSDYLSAQLGAWRSGNRRAKAPDCMHEIATRLTDDDVTAVTAWLAAQPAPANPVPAAAR
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHH
SLKLPLACGSEPQ
HCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]