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The map label for this gene is yieP [H]

Identifier: 238028564

GI number: 238028564

Start: 3441120

End: 3441800

Strand: Reverse

Name: yieP [H]

Synonym: bglu_1g30280

Alternate gene names: 238028564

Gene position: 3441800-3441120 (Counterclockwise)

Preceding gene: 238028566

Following gene: 238028560

Centisome position: 88.1

GC content: 73.13

Gene sequence:

>681_bases
GTGATTCAACGAGACCTGCATGGACAAACCGCGTTCCGGCTCGCAACCGCGATCCTGCGCGGCGACTACGCGCCCGCGGC
GACGCTGCCGCGCGAGGCCGAGCTGATGCGGGCGTTCGGCGTGAGCCGCACGGTGCTGCGCGAGGCGCTGCGCACGCTGA
CCTCGAAGGGGCTGATCGAGTCGCGGCCGAAGGTCGGCACGCGGGTGCGCCCGCGCCACGCCTGGAACCTGCTCGATGCG
GAGCTGCTCGACTGGTATTCGCAGGTGGCGCCGCCGCTCGCCTTCGCGATGCAGCTGCAGGAGATGCGCGAGATGGTGGA
GCCCTACGCGGCGGGGCTCGCCGCGCGTGCGTGGGCACCCGACACCCTGGCCGAGATGGAGGCCGCGCACGAGGCGATGT
GCGAGGCCAGGCAGGTGGACGAATGGGTGCGCGCCGACCTGCGCTTTCACCTGAGCGTGCTGGCCGCGGGCGGCAATGAA
CTGCTGATTCCGCTCGGCGCGCTGATCGAGCGCACGCTCGAGGCGCAGCTGCGCGTCAACGCGCGGCGCGCCGACGTGTT
CAACGCGTCGCTGGCCGAGCACACGCGCGTGTGCGAGGCGATCCGCGCGCGCGATGCCGAGGCGGCGCGCCGCGCGATGG
CGGCGCTGCTCGGCACCACGCGCGCGCGCATCGAGCGCTGA

Upstream 100 bases:

>100_bases
GCGTCGATGATGGCATCCTACACGAAAGCGCTAAAAAGTAGTATTAATAGCACTTTTGCGCAGATAGTGGTCAGCGGCAT
GCCGCGTGACGAGGAGAACC

Downstream 100 bases:

>100_bases
GGCCGCCGTCGGCGCCGCGGTCGCGCCGCAGCCGCCGGCCTCAGCCGGCCGGCTTCGCGCCGGCCGCCGCGTCGGCCGGC
ACCTGCGGCGCGGTCGCGTC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MIQRDLHGQTAFRLATAILRGDYAPAATLPREAELMRAFGVSRTVLREALRTLTSKGLIESRPKVGTRVRPRHAWNLLDA
ELLDWYSQVAPPLAFAMQLQEMREMVEPYAAGLAARAWAPDTLAEMEAAHEAMCEARQVDEWVRADLRFHLSVLAAGGNE
LLIPLGALIERTLEAQLRVNARRADVFNASLAEHTRVCEAIRARDAEAARRAMAALLGTTRARIER

Sequences:

>Translated_226_residues
MIQRDLHGQTAFRLATAILRGDYAPAATLPREAELMRAFGVSRTVLREALRTLTSKGLIESRPKVGTRVRPRHAWNLLDA
ELLDWYSQVAPPLAFAMQLQEMREMVEPYAAGLAARAWAPDTLAEMEAAHEAMCEARQVDEWVRADLRFHLSVLAAGGNE
LLIPLGALIERTLEAQLRVNARRADVFNASLAEHTRVCEAIRARDAEAARRAMAALLGTTRARIER
>Mature_226_residues
MIQRDLHGQTAFRLATAILRGDYAPAATLPREAELMRAFGVSRTVLREALRTLTSKGLIESRPKVGTRVRPRHAWNLLDA
ELLDWYSQVAPPLAFAMQLQEMREMVEPYAAGLAARAWAPDTLAEMEAAHEAMCEARQVDEWVRADLRFHLSVLAAGGNE
LLIPLGALIERTLEAQLRVNARRADVFNASLAEHTRVCEAIRARDAEAARRAMAALLGTTRARIER

Specific function: Repressor For The Dgorkat Operon. Binds D-Galactonate As An Inducer. [C]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48994961, Length=218, Percent_Identity=33.9449541284404, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI48994955, Length=217, Percent_Identity=34.5622119815668, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1790032, Length=239, Percent_Identity=28.8702928870293, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 25187; Mature: 25187

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQRDLHGQTAFRLATAILRGDYAPAATLPREAELMRAFGVSRTVLREALRTLTSKGLIE
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHH
SRPKVGTRVRPRHAWNLLDAELLDWYSQVAPPLAFAMQLQEMREMVEPYAAGLAARAWAP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DTLAEMEAAHEAMCEARQVDEWVRADLRFHLSVLAAGGNELLIPLGALIERTLEAQLRVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHH
ARRADVFNASLAEHTRVCEAIRARDAEAARRAMAALLGTTRARIER
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIQRDLHGQTAFRLATAILRGDYAPAATLPREAELMRAFGVSRTVLREALRTLTSKGLIE
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHH
SRPKVGTRVRPRHAWNLLDAELLDWYSQVAPPLAFAMQLQEMREMVEPYAAGLAARAWAP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DTLAEMEAAHEAMCEARQVDEWVRADLRFHLSVLAAGGNELLIPLGALIERTLEAQLRVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHH
ARRADVFNASLAEHTRVCEAIRARDAEAARRAMAALLGTTRARIER
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]