| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028559
Identifier: 238028559
GI number: 238028559
Start: 3433878
End: 3435569
Strand: Reverse
Name: 238028559
Synonym: bglu_1g30230
Alternate gene names: NA
Gene position: 3435569-3433878 (Counterclockwise)
Preceding gene: 238028560
Following gene: 238028556
Centisome position: 87.94
GC content: 71.93
Gene sequence:
>1692_bases ATGTCGAAACAGACGCCCCCCGAAGCACCGTCCGCCGGCCCGCATGCGTCGCAGCACGCAGCGGTCTCGCGCCGCGGTTT CCTGAAGCTGGCCGGCGTGTCCGGCCTCGCCACCGCGAGCGGCCTGGGCGCCGTGCGCGCGGCCGCGGCCGCGCCGGACG GCACGCCCGAGCAGATCCACCTGACCTGGGGCGACGATCCCTCGTCCGAGGTGACGATCTCCTGGGCCTCGCTCGCGCCC GCCGCGAACCCGCGCGTGCGCGTGTCGGGCGACGCCGGCCGGCCATTCACGGTGCATGCCGTGCAGCGCAGCTACACCGA CGGCCTGAACGGCGCGGTGGTGTTTGCCTATCACGCGCGCCTGCTCGGGCTGCGGGCCGACTCGCGCTACGCCTACGAAG TCACCGCCGACAACGACGCCAACGCCGCGCGGCCGTTCGCTGCCAGCTTTCGCACCGCGCCGCGCGGGCGTGCGCCGTTT CGCTGGACCAGCTACGGCGACCTGGCCACGCCGAACACGGGCTGGGTGCTGTCGTCGCCGCAGAGCCGCTTCGCGGTGCA GGCGGTGGAGCGCTTCCAGCCGCTGTTCCACCTGCTCAACGGCGACCTCTGCTACGCGAACCTGAATCCCGCGCACCAGC CCGACGTCTGGCGCGACTTCGGCAACAACAACCAGAGCTCGGCCGCCAACCGTCCGTGGATGCCGTGCCCCGGCAATCAC GAGATCGAGTTCCACAACGGCCCGCAGGGGCTCGATTCCTACCTCGCGCGCTACGCGCTGCCCGGCAACGGCACGCGTTT CCCGGGGCGCTGGTACACCTTCCGCGTGGGCGCGGTGCGGTTCATCTCGCTCGACGCCGACGACGTGGTCTACCAGGACG GCGCGGCCTTCGTGGCCGGCCCCGCGCCGCTGGTGCCGGCCGCCAGCACCGGCCACGAGCCGGTGGCGCCGGGCACCTCG TTCTACGTGCGCGGCTACAGCCAGGGCGAGCAGACCCGCTGGCTCGAACGGACGCTGCGGCATGCCTCGCAAGACGGTTC GATCGACTGGATCGTGGTGCAGATGCACCAGGACGCGCTCAGCTCGTCGAAGTCGGGCAACGGCTCCGACAAGGGCATCC GCGAGGCGTGGCTGCCGCTCTTCGATCGCTACGGCGTCGATCTCGTGCTGTGCGGCCACGACCACGACTACGAGCGCAGC TTCCCGGTGCGCGGCTGCCATCACCACGCGGGCGTGGACGCGGCCACCGGCTCGGTGGTCGACACGCTGCAGCCGAAGCC GGTGGTCACCGCCGATCCCGAGGACCGCACCTTCGACACGCGTCACGGCACGATCCACCTGATCCTCGGCGGCGGCGGGA CCAGCGCGCCGACCGACAAGTATGGCGACGATCCCGCCACCGGGCAGCCGCAGGCGATGGTCTTCACCAAGCCGAACCGG CCGGTGCCGGGCGCCACCGCCGGCACCTTCGTGCGGCCCGGCGCCGATGCGCGCGAGGACGCGGTCTGGTCGGCGCGGCG TGATGCCGGCAGCGGTTACGGGATCGCCGTGTTCGACTACGAGCCGGGCGAGGTGGGCGGCAATACCACCATCACGGTCA GCTACTACCACGCGGCCGGCGCCGACTCGACGCCGAACCCGGACTACTCGCTGTTCGAGACCATCGTGCTGAGCAAGCCG CATCGCTGCTGA
Upstream 100 bases:
>100_bases CGAGGGCCGTCGCCTCCCTCGTGCAGCGCCCGGCCGTGCCGCCCTCGGGCCGCCCCGGCCGGGCCGCGCGATCGATACGA GACAAGATCGGAGCCCACCG
Downstream 100 bases:
>100_bases GCGCGGCGCGGGCAACCAGGCGCGCGCCATCGAGCACGCGGGGCGCCGCTGACGAGCCGGCGCCCCGCCTGTCGTTGCGG CCCGCCGTGGCCGGCACCGC
Product: Ser/Thr protein phosphatase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 563; Mature: 562
Protein sequence:
>563_residues MSKQTPPEAPSAGPHASQHAAVSRRGFLKLAGVSGLATASGLGAVRAAAAAPDGTPEQIHLTWGDDPSSEVTISWASLAP AANPRVRVSGDAGRPFTVHAVQRSYTDGLNGAVVFAYHARLLGLRADSRYAYEVTADNDANAARPFAASFRTAPRGRAPF RWTSYGDLATPNTGWVLSSPQSRFAVQAVERFQPLFHLLNGDLCYANLNPAHQPDVWRDFGNNNQSSAANRPWMPCPGNH EIEFHNGPQGLDSYLARYALPGNGTRFPGRWYTFRVGAVRFISLDADDVVYQDGAAFVAGPAPLVPAASTGHEPVAPGTS FYVRGYSQGEQTRWLERTLRHASQDGSIDWIVVQMHQDALSSSKSGNGSDKGIREAWLPLFDRYGVDLVLCGHDHDYERS FPVRGCHHHAGVDAATGSVVDTLQPKPVVTADPEDRTFDTRHGTIHLILGGGGTSAPTDKYGDDPATGQPQAMVFTKPNR PVPGATAGTFVRPGADAREDAVWSARRDAGSGYGIAVFDYEPGEVGGNTTITVSYYHAAGADSTPNPDYSLFETIVLSKP HRC
Sequences:
>Translated_563_residues MSKQTPPEAPSAGPHASQHAAVSRRGFLKLAGVSGLATASGLGAVRAAAAAPDGTPEQIHLTWGDDPSSEVTISWASLAP AANPRVRVSGDAGRPFTVHAVQRSYTDGLNGAVVFAYHARLLGLRADSRYAYEVTADNDANAARPFAASFRTAPRGRAPF RWTSYGDLATPNTGWVLSSPQSRFAVQAVERFQPLFHLLNGDLCYANLNPAHQPDVWRDFGNNNQSSAANRPWMPCPGNH EIEFHNGPQGLDSYLARYALPGNGTRFPGRWYTFRVGAVRFISLDADDVVYQDGAAFVAGPAPLVPAASTGHEPVAPGTS FYVRGYSQGEQTRWLERTLRHASQDGSIDWIVVQMHQDALSSSKSGNGSDKGIREAWLPLFDRYGVDLVLCGHDHDYERS FPVRGCHHHAGVDAATGSVVDTLQPKPVVTADPEDRTFDTRHGTIHLILGGGGTSAPTDKYGDDPATGQPQAMVFTKPNR PVPGATAGTFVRPGADAREDAVWSARRDAGSGYGIAVFDYEPGEVGGNTTITVSYYHAAGADSTPNPDYSLFETIVLSKP HRC >Mature_562_residues SKQTPPEAPSAGPHASQHAAVSRRGFLKLAGVSGLATASGLGAVRAAAAAPDGTPEQIHLTWGDDPSSEVTISWASLAPA ANPRVRVSGDAGRPFTVHAVQRSYTDGLNGAVVFAYHARLLGLRADSRYAYEVTADNDANAARPFAASFRTAPRGRAPFR WTSYGDLATPNTGWVLSSPQSRFAVQAVERFQPLFHLLNGDLCYANLNPAHQPDVWRDFGNNNQSSAANRPWMPCPGNHE IEFHNGPQGLDSYLARYALPGNGTRFPGRWYTFRVGAVRFISLDADDVVYQDGAAFVAGPAPLVPAASTGHEPVAPGTSF YVRGYSQGEQTRWLERTLRHASQDGSIDWIVVQMHQDALSSSKSGNGSDKGIREAWLPLFDRYGVDLVLCGHDHDYERSF PVRGCHHHAGVDAATGSVVDTLQPKPVVTADPEDRTFDTRHGTIHLILGGGGTSAPTDKYGDDPATGQPQAMVFTKPNRP VPGATAGTFVRPGADAREDAVWSARRDAGSGYGIAVFDYEPGEVGGNTTITVSYYHAAGADSTPNPDYSLFETIVLSKPH RC
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR008963 - InterPro: IPR015914 - InterPro: IPR006311 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 60313; Mature: 60182
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQTPPEAPSAGPHASQHAAVSRRGFLKLAGVSGLATASGLGAVRAAAAAPDGTPEQIH CCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCHHHCCCHHHHHHHCCCCCCCCEEE LTWGDDPSSEVTISWASLAPAANPRVRVSGDAGRPFTVHAVQRSYTDGLNGAVVFAYHAR EEECCCCCCEEEEEEHHCCCCCCCCEEEECCCCCCEEEEEEHHHHCCCCCCEEEEEEEEE LLGLRADSRYAYEVTADNDANAARPFAASFRTAPRGRAPFRWTSYGDLATPNTGWVLSSP HEEEECCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCCCCEEECCC QSRFAVQAVERFQPLFHLLNGDLCYANLNPAHQPDVWRDFGNNNQSSAANRPWMPCPGNH HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC EIEFHNGPQGLDSYLARYALPGNGTRFPGRWYTFRVGAVRFISLDADDVVYQDGAAFVAG EEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECEEEEEEECCCCEEEECCCEEEEC PAPLVPAASTGHEPVAPGTSFYVRGYSQGEQTRWLERTLRHASQDGSIDWIVVQMHQDAL CCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHH SSSKSGNGSDKGIREAWLPLFDRYGVDLVLCGHDHDYERSFPVRGCHHHAGVDAATGSVV HCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCHH DTLQPKPVVTADPEDRTFDTRHGTIHLILGGGGTSAPTDKYGDDPATGQPQAMVFTKPNR HCCCCCCEEECCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCC PVPGATAGTFVRPGADAREDAVWSARRDAGSGYGIAVFDYEPGEVGGNTTITVSYYHAAG CCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEEEEEECC ADSTPNPDYSLFETIVLSKPHRC CCCCCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure SKQTPPEAPSAGPHASQHAAVSRRGFLKLAGVSGLATASGLGAVRAAAAAPDGTPEQIH CCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCHHHCCCHHHHHHHCCCCCCCCEEE LTWGDDPSSEVTISWASLAPAANPRVRVSGDAGRPFTVHAVQRSYTDGLNGAVVFAYHAR EEECCCCCCEEEEEEHHCCCCCCCCEEEECCCCCCEEEEEEHHHHCCCCCCEEEEEEEEE LLGLRADSRYAYEVTADNDANAARPFAASFRTAPRGRAPFRWTSYGDLATPNTGWVLSSP HEEEECCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCCCCEEECCC QSRFAVQAVERFQPLFHLLNGDLCYANLNPAHQPDVWRDFGNNNQSSAANRPWMPCPGNH HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC EIEFHNGPQGLDSYLARYALPGNGTRFPGRWYTFRVGAVRFISLDADDVVYQDGAAFVAG EEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECEEEEEEECCCCEEEECCCEEEEC PAPLVPAASTGHEPVAPGTSFYVRGYSQGEQTRWLERTLRHASQDGSIDWIVVQMHQDAL CCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHH SSSKSGNGSDKGIREAWLPLFDRYGVDLVLCGHDHDYERSFPVRGCHHHAGVDAATGSVV HCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCHH DTLQPKPVVTADPEDRTFDTRHGTIHLILGGGGTSAPTDKYGDDPATGQPQAMVFTKPNR HCCCCCCEEECCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCC PVPGATAGTFVRPGADAREDAVWSARRDAGSGYGIAVFDYEPGEVGGNTTITVSYYHAAG CCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEEEEEECC ADSTPNPDYSLFETIVLSKPHRC CCCCCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]