| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yhdN [H]
Identifier: 238028553
GI number: 238028553
Start: 3424168
End: 3425160
Strand: Direct
Name: yhdN [H]
Synonym: bglu_1g30170
Alternate gene names: 238028553
Gene position: 3424168-3425160 (Clockwise)
Preceding gene: 238028552
Following gene: 238028555
Centisome position: 87.65
GC content: 71.9
Gene sequence:
>993_bases ATGAACATCGAAACCACCCGCATCGCGGGCATCGACACGCCGGTGTCGCGCATCGGCCTGGGCACCTGGGCGATCGGCGG CTGGATGTGGGGCGGCACCGACGACCGGCAGTCGATCGCCACCGTGCGCCAGGCCGTCGAGCAGGGCATCAACCTGATCG ACACGGCGCCCGTCTACGGCTTCGGCCATGCCGAGTCGATCGTCGGCGAGGCGCTCGCGGGCATCCGCGACCAGGCCGTG ATCGCCACCAAGGTCGCGCTCGAGTGGAACGCCGACGAGCAGGTCATGCGCAATGCCAGCGTCGCGCGGATCCGCCGCGA GATCGAGGATTCGCTGCGCCGGCTGCGCACCGACCGCATCGACCTCTATCAGGTCCACTGGCCCGACCCGCTGGTGCCGT TCGAGGAGACCGCCGCCGAACTCGAACGCCTGCGCCGCGACGGCAAGATCCTCGCGATCGGCGTGAGCAACTACAGCCCG GCGCAGATGGAGCGATTCGCCTCGGCCGCGCCGCTGGCCACCGTGCAGCCGCCTTACAACTTGTTCGAGCGCGCGATCGA GGCCGACGTGCTGCCGTATGCGCAGCAGCATGGGCTGCAGGTGCTGGCCTACGGCGCGCTGTGCCGCGGCCTGCTGTCGG GGCGGATGACGGCCGACACGCGCTTCCAGGGCGACGACCTGCGCCGCACCGATCCGAAGTTCCAGGCGCCGCGCTTCGCG CAATACCTGGCGGCGGTGGACGCGCTGGCGGGCCTCGCCCGCGAGCGGCACGGCAAATCGGTGCTGGCGCTCGCGATCCG CTGGGTGCTGGACCAGGGGCCGACCATCGCGCTGTGGGGCGCGCGCAGGCCGGAGCAGCTGAGCGGCATCGGCGACGCGT TCGGCTGGCGGCTCGACGCGCGCGATCTGGCCGACATCGACGCGCTCCTGGCGCGGCACGTGACCGACCCGGTCGGGCCG GAATTCATGGCGCCGCCGCTGCGCACGGCCTGA
Upstream 100 bases:
>100_bases CCCATCGTGCCGGCCTGCCGCCGCAACGGCGCGGCAAGCGCGCGCAGCGCATTGATCGCCGGTCTAGACTGGCGCTTTCA ACCCGCCAAGCGAGATCAGC
Downstream 100 bases:
>100_bases GCCGCACGACCAGGGCCGCGCCGCCCAAATCGCAGGGCCGCGGAGCCGGCCGCCGCGCACAGCATTTATCCAAGCGCCGC GGTGGACAAGTGCTGTGCGC
Product: aldo/keto reductase
Products: NA
Alternate protein names: GSP69; AKR11B [H]
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MNIETTRIAGIDTPVSRIGLGTWAIGGWMWGGTDDRQSIATVRQAVEQGINLIDTAPVYGFGHAESIVGEALAGIRDQAV IATKVALEWNADEQVMRNASVARIRREIEDSLRRLRTDRIDLYQVHWPDPLVPFEETAAELERLRRDGKILAIGVSNYSP AQMERFASAAPLATVQPPYNLFERAIEADVLPYAQQHGLQVLAYGALCRGLLSGRMTADTRFQGDDLRRTDPKFQAPRFA QYLAAVDALAGLARERHGKSVLALAIRWVLDQGPTIALWGARRPEQLSGIGDAFGWRLDARDLADIDALLARHVTDPVGP EFMAPPLRTA
Sequences:
>Translated_330_residues MNIETTRIAGIDTPVSRIGLGTWAIGGWMWGGTDDRQSIATVRQAVEQGINLIDTAPVYGFGHAESIVGEALAGIRDQAV IATKVALEWNADEQVMRNASVARIRREIEDSLRRLRTDRIDLYQVHWPDPLVPFEETAAELERLRRDGKILAIGVSNYSP AQMERFASAAPLATVQPPYNLFERAIEADVLPYAQQHGLQVLAYGALCRGLLSGRMTADTRFQGDDLRRTDPKFQAPRFA QYLAAVDALAGLARERHGKSVLALAIRWVLDQGPTIALWGARRPEQLSGIGDAFGWRLDARDLADIDALLARHVTDPVGP EFMAPPLRTA >Mature_330_residues MNIETTRIAGIDTPVSRIGLGTWAIGGWMWGGTDDRQSIATVRQAVEQGINLIDTAPVYGFGHAESIVGEALAGIRDQAV IATKVALEWNADEQVMRNASVARIRREIEDSLRRLRTDRIDLYQVHWPDPLVPFEETAAELERLRRDGKILAIGVSNYSP AQMERFASAAPLATVQPPYNLFERAIEADVLPYAQQHGLQVLAYGALCRGLLSGRMTADTRFQGDDLRRTDPKFQAPRFA QYLAAVDALAGLARERHGKSVLALAIRWVLDQGPTIALWGARRPEQLSGIGDAFGWRLDARDLADIDALLARHVTDPVGP EFMAPPLRTA
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=288, Percent_Identity=28.125, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI4504825, Length=288, Percent_Identity=28.125, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI223718702, Length=214, Percent_Identity=28.5046728971963, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI27436962, Length=288, Percent_Identity=27.7777777777778, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI27436966, Length=288, Percent_Identity=27.7777777777778, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI27436964, Length=288, Percent_Identity=27.7777777777778, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI41327764, Length=272, Percent_Identity=30.8823529411765, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI41152114, Length=194, Percent_Identity=29.8969072164948, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI27436971, Length=295, Percent_Identity=27.7966101694915, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI223718708, Length=126, Percent_Identity=32.5396825396825, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1788070, Length=321, Percent_Identity=36.7601246105919, Blast_Score=172, Evalue=2e-44, Organism=Escherichia coli, GI1788081, Length=208, Percent_Identity=39.4230769230769, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1789199, Length=345, Percent_Identity=32.463768115942, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI87081735, Length=323, Percent_Identity=31.2693498452012, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI1789375, Length=329, Percent_Identity=28.8753799392097, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI48994888, Length=264, Percent_Identity=29.1666666666667, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI87082198, Length=297, Percent_Identity=25.5892255892256, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1786400, Length=204, Percent_Identity=32.843137254902, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1787674, Length=183, Percent_Identity=29.5081967213115, Blast_Score=72, Evalue=4e-14, Organism=Caenorhabditis elegans, GI212645785, Length=220, Percent_Identity=31.8181818181818, Blast_Score=84, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6323998, Length=333, Percent_Identity=27.9279279279279, Blast_Score=99, Evalue=8e-22, Organism=Saccharomyces cerevisiae, GI6319958, Length=307, Percent_Identity=27.0358306188925, Blast_Score=97, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6319951, Length=246, Percent_Identity=30.0813008130081, Blast_Score=84, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6322615, Length=260, Percent_Identity=26.5384615384615, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6325169, Length=310, Percent_Identity=23.8709677419355, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI24646155, Length=209, Percent_Identity=34.4497607655502, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI24646159, Length=221, Percent_Identity=31.2217194570136, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24640980, Length=311, Percent_Identity=27.6527331189711, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI45549126, Length=311, Percent_Identity=27.6527331189711, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR018170 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 36367; Mature: 36367
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIETTRIAGIDTPVSRIGLGTWAIGGWMWGGTDDRQSIATVRQAVEQGINLIDTAPVYG CCCCCEEECCCCCCHHHHCCCHHHHCCEECCCCCCHHHHHHHHHHHHHCCCEEECCCCCC FGHAESIVGEALAGIRDQAVIATKVALEWNADEQVMRNASVARIRREIEDSLRRLRTDRI CCHHHHHHHHHHHCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DLYQVHWPDPLVPFEETAAELERLRRDGKILAIGVSNYSPAQMERFASAAPLATVQPPYN EEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCHH LFERAIEADVLPYAQQHGLQVLAYGALCRGLLSGRMTADTRFQGDDLRRTDPKFQAPRFA HHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH QYLAAVDALAGLARERHGKSVLALAIRWVLDQGPTIALWGARRPEQLSGIGDAFGWRLDA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCHHHHCCCCCC RDLADIDALLARHVTDPVGPEFMAPPLRTA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNIETTRIAGIDTPVSRIGLGTWAIGGWMWGGTDDRQSIATVRQAVEQGINLIDTAPVYG CCCCCEEECCCCCCHHHHCCCHHHHCCEECCCCCCHHHHHHHHHHHHHCCCEEECCCCCC FGHAESIVGEALAGIRDQAVIATKVALEWNADEQVMRNASVARIRREIEDSLRRLRTDRI CCHHHHHHHHHHHCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DLYQVHWPDPLVPFEETAAELERLRRDGKILAIGVSNYSPAQMERFASAAPLATVQPPYN EEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCHH LFERAIEADVLPYAQQHGLQVLAYGALCRGLLSGRMTADTRFQGDDLRRTDPKFQAPRFA HHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH QYLAAVDALAGLARERHGKSVLALAIRWVLDQGPTIALWGARRPEQLSGIGDAFGWRLDA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCHHHHCCCCCC RDLADIDALLARHVTDPVGPEFMAPPLRTA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 9298659 [H]