| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028555
Identifier: 238028555
GI number: 238028555
Start: 3426378
End: 3427400
Strand: Direct
Name: 238028555
Synonym: bglu_1g30190
Alternate gene names: NA
Gene position: 3426378-3427400 (Clockwise)
Preceding gene: 238028553
Following gene: 238028557
Centisome position: 87.71
GC content: 71.65
Gene sequence:
>1023_bases ATGGCCGAATATTTCGACGTAGACCACGCCAACCAGATCCGCGCGCTCGGCGCCCGCTTCGCCGCGCGCACCGAGTGGCC GACCTGGCTGCTGATCGCGACCATCTACGGCGGCTGGCTCGGCGTCATGCTGCTGGTGCGCGCCGGCGCGCTGCCGTTCG CGGCGGCCGCGCCGATGCTGATCGTGCTGGCGGCCTGGCAGATGTCGCTGCAGCACGAGCTGCTGCACGGCCATCCCACG CGCCTCGACTGGCTGAACCGGCTGCTCGCCTATCCGCCGCTCGCGATCTGGTATCCGTACACCTGCTATCGCGACACGCA TCTCGCGCACCATCGCGACGACGATCTGACCGTGCCCGGCGTGGACCCGGAAGGCAATTACCTGCCGCGCGGGCAATGGG CGACGCTGCCGCGCTGGCGGCGCGCGCTGTGGGTGCTGCGCAAGACCTTCGTCGGGCGGCTCGTGGTGGGGCCGCCGATG AGCGTGGCCGCGACGCTCGCCGACGCGCTGCGGCGCATCCGGCGCGGCGAGCGCGGCGCCCTGCGCATGTGGGCCACGCA CGGCGCCTGCGTGGCGGCGCTGCTGGCCTGGGTGCAGCACTCGGCCGGCATCGCCTGGTGGGTCTACCTGCTCGCCGTGA GCTGGCCGGCGCTGTCGCTCGCGATGGTGCGCTCGCTGCACGAGCATCGCGCCGCGGTCCATCCGAAGGCACGCATCGCG ATCAACGAGGCCGGCCTCGCGATGCGCCTGCTCTACCTGAACAACAATTACCATCTGGTGCATCACGATCTGCCCAGCCT GCCGTGGTTCCAGCTGCCGGCCGCGTACCGGATGCGTCGCGAGGCCTACCTGGCCAAGTGCGACGGCTTCGTGATCCGCG GCGGCTATCTGGAGCTGCTGCGCCGCTACGCGTGGCGGCCGACCGACGCGCCCGAGCATCCGTTCCGGCACGCCACGGCC GCGCTCTCGAGCGGCGGCGGCCGGATCGCGGTGATCGAGGGGTGCCTGCAGATCAGCAGCTGA
Upstream 100 bases:
>100_bases TAGAGTGAGCGCTGCGTCACGCGAACCGCGAGCGAGCCGGGTCCGGCACCCGCCGTCGAGGCGCCGCCCCGCATCCCGCG CGCCGCCCCGCCTTCCCGAC
Downstream 100 bases:
>100_bases GGCGGCGCAAGCACGGCATGCGGGGCGTTCGCCATCGCACCGGCCGGCCGAGGCCGGCTCGTCCTGCCGACAGCCGGCCT CGCGCGGCGCGCGGCGCGCG
Product: Fatty acid desaturase
Products: NA
Alternate protein names: Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Domain Protein; Fatty Acid Desaturase Domain-Containing Protein; Fatty Acid Desaturase Subfamily; Beta-Carotene Ketolase
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MAEYFDVDHANQIRALGARFAARTEWPTWLLIATIYGGWLGVMLLVRAGALPFAAAAPMLIVLAAWQMSLQHELLHGHPT RLDWLNRLLAYPPLAIWYPYTCYRDTHLAHHRDDDLTVPGVDPEGNYLPRGQWATLPRWRRALWVLRKTFVGRLVVGPPM SVAATLADALRRIRRGERGALRMWATHGACVAALLAWVQHSAGIAWWVYLLAVSWPALSLAMVRSLHEHRAAVHPKARIA INEAGLAMRLLYLNNNYHLVHHDLPSLPWFQLPAAYRMRREAYLAKCDGFVIRGGYLELLRRYAWRPTDAPEHPFRHATA ALSSGGGRIAVIEGCLQISS
Sequences:
>Translated_340_residues MAEYFDVDHANQIRALGARFAARTEWPTWLLIATIYGGWLGVMLLVRAGALPFAAAAPMLIVLAAWQMSLQHELLHGHPT RLDWLNRLLAYPPLAIWYPYTCYRDTHLAHHRDDDLTVPGVDPEGNYLPRGQWATLPRWRRALWVLRKTFVGRLVVGPPM SVAATLADALRRIRRGERGALRMWATHGACVAALLAWVQHSAGIAWWVYLLAVSWPALSLAMVRSLHEHRAAVHPKARIA INEAGLAMRLLYLNNNYHLVHHDLPSLPWFQLPAAYRMRREAYLAKCDGFVIRGGYLELLRRYAWRPTDAPEHPFRHATA ALSSGGGRIAVIEGCLQISS >Mature_339_residues AEYFDVDHANQIRALGARFAARTEWPTWLLIATIYGGWLGVMLLVRAGALPFAAAAPMLIVLAAWQMSLQHELLHGHPTR LDWLNRLLAYPPLAIWYPYTCYRDTHLAHHRDDDLTVPGVDPEGNYLPRGQWATLPRWRRALWVLRKTFVGRLVVGPPMS VAATLADALRRIRRGERGALRMWATHGACVAALLAWVQHSAGIAWWVYLLAVSWPALSLAMVRSLHEHRAAVHPKARIAI NEAGLAMRLLYLNNNYHLVHHDLPSLPWFQLPAAYRMRREAYLAKCDGFVIRGGYLELLRRYAWRPTDAPEHPFRHATAA LSSGGGRIAVIEGCLQISS
Specific function: Unknown
COG id: COG3239
COG function: function code I; Fatty acid desaturase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38407; Mature: 38276
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEYFDVDHANQIRALGARFAARTEWPTWLLIATIYGGWLGVMLLVRAGALPFAAAAPML CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IVLAAWQMSLQHELLHGHPTRLDWLNRLLAYPPLAIWYPYTCYRDTHLAHHRDDDLTVPG HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCHHCCCCCCCCCCCCCCCCCC VDPEGNYLPRGQWATLPRWRRALWVLRKTFVGRLVVGPPMSVAATLADALRRIRRGERGA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHCCCCCC LRMWATHGACVAALLAWVQHSAGIAWWVYLLAVSWPALSLAMVRSLHEHRAAVHPKARIA EEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEE INEAGLAMRLLYLNNNYHLVHHDLPSLPWFQLPAAYRMRREAYLAKCDGFVIRGGYLELL EECCCEEEEEEEEECCEEEEECCCCCCCCHHCCHHHHHHHHHHHHHCCCEEEECHHHHHH RRYAWRPTDAPEHPFRHATAALSSGGGRIAVIEGCLQISS HHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEHHHCCC >Mature Secondary Structure AEYFDVDHANQIRALGARFAARTEWPTWLLIATIYGGWLGVMLLVRAGALPFAAAAPML CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IVLAAWQMSLQHELLHGHPTRLDWLNRLLAYPPLAIWYPYTCYRDTHLAHHRDDDLTVPG HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCHHCCCCCCCCCCCCCCCCCC VDPEGNYLPRGQWATLPRWRRALWVLRKTFVGRLVVGPPMSVAATLADALRRIRRGERGA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHCCCCCC LRMWATHGACVAALLAWVQHSAGIAWWVYLLAVSWPALSLAMVRSLHEHRAAVHPKARIA EEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEE INEAGLAMRLLYLNNNYHLVHHDLPSLPWFQLPAAYRMRREAYLAKCDGFVIRGGYLELL EECCCEEEEEEEEECCEEEEECCCCCCCCHHCCHHHHHHHHHHHHHCCCEEEECHHHHHH RRYAWRPTDAPEHPFRHATAALSSGGGRIAVIEGCLQISS HHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA